RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 RAI2Q9Y5P3 530 aa17.33■□□□□ 0.36
SMG6-212ENST00000573153 RASGRP1O95267 797 aa17.32■□□□□ 0.36
SMG6-212ENST00000573153 CES1P23141 567 aa17.32■□□□□ 0.36
SMG6-212ENST00000573153 ETV3P41162 512 aa17.32■□□□□ 0.36
SMG6-212ENST00000573153 ZBTB17Q13105 803 aa17.32■□□□□ 0.36
SMG6-212ENST00000573153 TAZQ16635 292 aa17.32■□□□□ 0.36
SMG6-212ENST00000573153 FAXCQ5TGI0 409 aa17.32■□□□□ 0.36
SMG6-212ENST00000573153 C19orf48Q6RUI8 117 aa17.32■□□□□ 0.36
SMG6-212ENST00000573153 HID1Q8IV36 788 aa17.32■□□□□ 0.36
SMG6-212ENST00000573153 FSTL5Q8N475 847 aaPredicted RBP17.32■□□□□ 0.36
SMG6-212ENST00000573153 CCL4L1Q8NHW4 92 aa17.32■□□□□ 0.36
SMG6-212ENST00000573153 CRELD1Q96HD1 420 aa17.32■□□□□ 0.36
SMG6-212ENST00000573153 IL12RB2Q99665 862 aa17.32■□□□□ 0.36
SMG6-212ENST00000573153 TEX101Q9BY14 249 aa17.32■□□□□ 0.36
SMG6-212ENST00000573153 SLC13A1Q9BZW2 595 aa17.32■□□□□ 0.36
SMG6-212ENST00000573153 RBSNQ9H1K0 784 aa17.32■□□□□ 0.36
SMG6-212ENST00000573153 URB1O60287 2271 aaKnown RBP17.32■□□□□ 0.36
SMG6-212ENST00000573153 A0A0J9YYE9 177 aa17.31■□□□□ 0.36
SMG6-212ENST00000573153 PMS2P1A4D2B8 440 aa17.31■□□□□ 0.36
SMG6-212ENST00000573153 PSMD11O00231 422 aa17.31■□□□□ 0.36
SMG6-212ENST00000573153 NTN3O00634 580 aaPredicted RBP17.31■□□□□ 0.36
SMG6-212ENST00000573153 BRINP1O60477 761 aa17.31■□□□□ 0.36
SMG6-212ENST00000573153 TRBC1P01850 177 aa17.31■□□□□ 0.36
SMG6-212ENST00000573153 CTPS1P17812 591 aa17.31■□□□□ 0.36
SMG6-212ENST00000573153 NFKBIAP25963 317 aa17.31■□□□□ 0.36
SMG6-212ENST00000573153 TEAD1P28347 426 aa17.31■□□□□ 0.36
SMG6-212ENST00000573153 DUSP3P51452 185 aaPredicted RBP17.31■□□□□ 0.36
SMG6-212ENST00000573153 ZNF75DP51815 510 aa17.31■□□□□ 0.36
SMG6-212ENST00000573153 PPIDQ08752 370 aaKnown RBP17.31■□□□□ 0.36
SMG6-212ENST00000573153 NR0B2Q15466 257 aa17.31■□□□□ 0.36
SMG6-212ENST00000573153 TCEA2Q15560 299 aa17.31■□□□□ 0.36
SMG6-212ENST00000573153 COL28A1Q2UY09 1125 aa17.31■□□□□ 0.36
SMG6-212ENST00000573153 CRTC1Q6UUV9 634 aa17.31■□□□□ 0.36
SMG6-212ENST00000573153 Q6ZVL8 140 aa17.31■□□□□ 0.36
SMG6-212ENST00000573153 NRROSQ86YC3 692 aa17.31■□□□□ 0.36
SMG6-212ENST00000573153 GPR156Q8NFN8 814 aa17.31■□□□□ 0.36
SMG6-212ENST00000573153 OR56A4Q8NGH8 313 aa17.31■□□□□ 0.36
SMG6-212ENST00000573153 SNIP1Q8TAD8 396 aaKnown RBP17.31■□□□□ 0.36
SMG6-212ENST00000573153 PDCD6IPQ8WUM4 868 aaKnown RBP17.31■□□□□ 0.36
SMG6-212ENST00000573153 NUS1Q96E22 293 aa17.31■□□□□ 0.36
SMG6-212ENST00000573153 PRR11Q96HE9 360 aaPredicted RBP17.31■□□□□ 0.36
SMG6-212ENST00000573153 PANX2Q96RD6 677 aa17.31■□□□□ 0.36
SMG6-212ENST00000573153 WDR24Q96S15 920 aa17.31■□□□□ 0.36
SMG6-212ENST00000573153 FRMD8Q9BZ67 464 aaPredicted RBP17.31■□□□□ 0.36
SMG6-212ENST00000573153 POLR1EQ9GZS1 481 aaKnown RBP17.31■□□□□ 0.36
SMG6-212ENST00000573153 HAUS2Q9NVX0 235 aa17.31■□□□□ 0.36
SMG6-212ENST00000573153 KCTD5Q9NXV2 234 aa17.31■□□□□ 0.36
SMG6-212ENST00000573153 KLQ9UEF7 1012 aa17.31■□□□□ 0.36
SMG6-212ENST00000573153 LHX6Q9UPM6 363 aa17.31■□□□□ 0.36
SMG6-212ENST00000573153 CPED1A4D0V7 1026 aa17.3■□□□□ 0.36
SMG6-212ENST00000573153 LRRD1A4D1F6 860 aa17.3■□□□□ 0.36
SMG6-212ENST00000573153 TNFRSF10CO14798 259 aa17.3■□□□□ 0.36
SMG6-212ENST00000573153 NOBOXO60393 691 aa17.3■□□□□ 0.36
SMG6-212ENST00000573153 CSO75390 466 aaKnown RBP17.3■□□□□ 0.36
SMG6-212ENST00000573153 CEACAM5P06731 702 aa17.3■□□□□ 0.36
SMG6-212ENST00000573153 ANXA6P08133 673 aa17.3■□□□□ 0.36
SMG6-212ENST00000573153 HOXB3P14651 431 aaPredicted RBP17.3■□□□□ 0.36
SMG6-212ENST00000573153 EIF2S3P41091 472 aaKnown RBP17.3■□□□□ 0.36
SMG6-212ENST00000573153 BLKP51451 505 aa17.3■□□□□ 0.36
SMG6-212ENST00000573153 IFI35P80217 286 aaPredicted RBP17.3■□□□□ 0.36
SMG6-212ENST00000573153 PTSQ03393 145 aa17.3■□□□□ 0.36
SMG6-212ENST00000573153 ACOX1Q15067 660 aa17.3■□□□□ 0.36
SMG6-212ENST00000573153 ISXQ2M1V0 245 aa17.3■□□□□ 0.36
SMG6-212ENST00000573153 HS1BP3Q53T59 392 aa17.3■□□□□ 0.36
SMG6-212ENST00000573153 ARMC12Q5T9G4 340 aa17.3■□□□□ 0.36
SMG6-212ENST00000573153 OGFOD3Q6PK18 319 aa17.3■□□□□ 0.36
SMG6-212ENST00000573153 LVRNQ6Q4G3 990 aa17.3■□□□□ 0.36
SMG6-212ENST00000573153 NPNTQ6UXI9 565 aa17.3■□□□□ 0.36
SMG6-212ENST00000573153 RHOT1Q8IXI2 618 aa17.3■□□□□ 0.36
SMG6-212ENST00000573153 ARL10Q8N8L6 244 aa17.3■□□□□ 0.36
SMG6-212ENST00000573153 MAPK15Q8TD08 544 aa17.3■□□□□ 0.36
SMG6-212ENST00000573153 TADA1Q96BN2 335 aa17.3■□□□□ 0.36
SMG6-212ENST00000573153 LYSMD1Q96S90 227 aa17.3■□□□□ 0.36
SMG6-212ENST00000573153 LGMNQ99538 433 aa17.3■□□□□ 0.36
SMG6-212ENST00000573153 TMEM168Q9H0V1 697 aa17.3■□□□□ 0.36
SMG6-212ENST00000573153 WDR26Q9H7D7 661 aa17.3■□□□□ 0.36
SMG6-212ENST00000573153 RBM22Q9NW64 420 aaKnown RBP eCLIP17.3■□□□□ 0.36
SMG6-212ENST00000573153 DDX56Q9NY93 547 aaKnown RBP17.3■□□□□ 0.36
SMG6-212ENST00000573153 TFR2Q9UP52 801 aa17.3■□□□□ 0.36
SMG6-212ENST00000573153 HYOU1Q9Y4L1 999 aa17.3■□□□□ 0.36
SMG6-212ENST00000573153 ENTPD2Q9Y5L3 495 aa17.3■□□□□ 0.36
SMG6-212ENST00000573153 A0A0A6YYK5 440 aaPredicted RBP17.29■□□□□ 0.36
SMG6-212ENST00000573153 A0A1W2PQM1 296 aa17.29■□□□□ 0.36
SMG6-212ENST00000573153 CAPN8A6NHC0 703 aa17.29■□□□□ 0.36
SMG6-212ENST00000573153 DXOO77932 396 aaKnown RBP17.29■□□□□ 0.36
SMG6-212ENST00000573153 MYCLP1P12525 358 aaPredicted RBP17.29■□□□□ 0.36
SMG6-212ENST00000573153 CCNB1P14635 433 aa17.29■□□□□ 0.36
SMG6-212ENST00000573153 HTR1BP28222 390 aa17.29■□□□□ 0.36
SMG6-212ENST00000573153 MAGEA1P43355 309 aa17.29■□□□□ 0.36
SMG6-212ENST00000573153 SKOR1P84550 965 aa17.29■□□□□ 0.36
SMG6-212ENST00000573153 CDK3Q00526 305 aa17.29■□□□□ 0.36
SMG6-212ENST00000573153 DPTQ07507 201 aa17.29■□□□□ 0.36
SMG6-212ENST00000573153 ADCY2Q08462 1091 aa17.29■□□□□ 0.36
SMG6-212ENST00000573153 ELOCQ15369 112 aa17.29■□□□□ 0.36
SMG6-212ENST00000573153 LRRC66Q68CR7 880 aa17.29■□□□□ 0.36
SMG6-212ENST00000573153 RD3Q7Z3Z2 195 aa17.29■□□□□ 0.36
SMG6-212ENST00000573153 HEATR4Q86WZ0 1026 aa17.29■□□□□ 0.36
SMG6-212ENST00000573153 C17orf82Q86X59 251 aaPredicted RBP17.29■□□□□ 0.36
SMG6-212ENST00000573153 SDR16C5Q8N3Y7 309 aa17.29■□□□□ 0.36
SMG6-212ENST00000573153 TPCN2Q8NHX9 752 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms