RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 CNTD1Q8N815 330 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 ARL10Q8N8L6 244 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 KCTD6Q8NC69 237 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 OR56A4Q8NGH8 313 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 SNIP1Q8TAD8 396 aaKnown RBP7.83□□□□□ -1.16
CDH3-209ENST00000569080 PDCD6IPQ8WUM4 868 aaKnown RBP7.83□□□□□ -1.16
CDH3-209ENST00000569080 PTCD2Q8WV60 388 aaKnown RBP7.83□□□□□ -1.16
CDH3-209ENST00000569080 NUS1Q96E22 293 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 SCRN2Q96FV2 425 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 IL12RB2Q99665 862 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 TEX101Q9BY14 249 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 FRMD8Q9BZ67 464 aaPredicted RBP7.83□□□□□ -1.16
CDH3-209ENST00000569080 WDR26Q9H7D7 661 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 MRPL40Q9NQ50 206 aaKnown RBP7.83□□□□□ -1.16
CDH3-209ENST00000569080 ZNHIT6Q9NWK9 470 aaKnown RBP7.83□□□□□ -1.16
CDH3-209ENST00000569080 NCKIPSDQ9NZQ3 722 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 KLQ9UEF7 1012 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 AMACRQ9UHK6 382 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 RABGEF1Q9UJ41 708 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 INTUQ9ULD6 942 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 PHTF1Q9UMS5 762 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 RAI2Q9Y5P3 530 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 ST14Q9Y5Y6 855 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 URB1O60287 2271 aaKnown RBP7.83□□□□□ -1.16
CDH3-209ENST00000569080 ARHGEF17Q96PE2 2063 aaPredicted RBP7.82□□□□□ -1.16
CDH3-209ENST00000569080 A0A0J9YYE9 177 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 PRSS38A1L453 326 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 LRRD1A4D1F6 860 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 KCNK1O00180 336 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 NTN3O00634 580 aaPredicted RBP7.82□□□□□ -1.16
CDH3-209ENST00000569080 TNFRSF10CO14798 259 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 NOBOXO60393 691 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 BRINP1O60477 761 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 DXOO77932 396 aaKnown RBP7.82□□□□□ -1.16
CDH3-209ENST00000569080 LCA5LO95447 670 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 TRBC1P01850 177 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 FUCA1P04066 466 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 ANXA6P08133 673 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 TPM1P09493 284 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 MYCLP1P12525 358 aaPredicted RBP7.82□□□□□ -1.16
CDH3-209ENST00000569080 CCNB1P14635 433 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 CTPS1P17812 591 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 MX2P20592 715 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 FECHP22830 423 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 TEAD1P28347 426 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 ARHGAP25P42331 645 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 DUSP3P51452 185 aaPredicted RBP7.82□□□□□ -1.16
CDH3-209ENST00000569080 STC1P52823 247 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 HADHBP55084 474 aaKnown RBP7.82□□□□□ -1.16
CDH3-209ENST00000569080 IFI35P80217 286 aaPredicted RBP7.82□□□□□ -1.16
CDH3-209ENST00000569080 CDK3Q00526 305 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 DPTQ07507 201 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 ACOX1Q15067 660 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 ELOCQ15369 112 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 TCEA2Q15560 299 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 FAM182AQ5T1J6 154 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 FAXCQ5TGI0 409 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 LRRC66Q68CR7 880 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 LVRNQ6Q4G3 990 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 CRTC1Q6UUV9 634 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 Q6ZVL8 140 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 USP45Q70EL2 814 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 MAP7D3Q8IWC1 876 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 CCDC13Q8IYE1 715 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 SDR16C5Q8N3Y7 309 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 GPR156Q8NFN8 814 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 CCL4L1Q8NHW4 92 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 TPCN2Q8NHX9 752 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 MAPK15Q8TD08 544 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 NSMCE1Q8WV22 266 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 NAT6Q93015 286 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 TADA1Q96BN2 335 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 CCDC42Q96M95 316 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 TRIB3Q96RU7 358 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 LYSMD1Q96S90 227 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 LGMNQ99538 433 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 GOLPH3Q9H4A6 298 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 RBM22Q9NW64 420 aaKnown RBP eCLIP7.82□□□□□ -1.16
CDH3-209ENST00000569080 SLC17A4Q9Y2C5 497 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 HYOU1Q9Y4L1 999 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 KIF26BQ2KJY2 2108 aa7.82□□□□□ -1.16
CDH3-209ENST00000569080 ZFC3H1O60293 1989 aaKnown RBP7.81□□□□□ -1.16
CDH3-209ENST00000569080 CPED1A4D0V7 1026 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 PMS2P1A4D2B8 440 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 CACNB4O00305 520 aaPredicted RBP7.81□□□□□ -1.16
CDH3-209ENST00000569080 CSO75390 466 aaKnown RBP7.81□□□□□ -1.16
CDH3-209ENST00000569080 TCEA3O75764 348 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 KRT1P04264 644 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 CEACAM5P06731 702 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 CYP2A6P11509 494 aaPredicted RBP7.81□□□□□ -1.16
CDH3-209ENST00000569080 COMTP21964 271 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 KELP23276 732 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 EIF2S3P41091 472 aaKnown RBP7.81□□□□□ -1.16
CDH3-209ENST00000569080 CDKN2BP42772 138 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 SLC1A1P43005 524 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 MARCKSL1P49006 195 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 SKOR1P84550 965 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 PTSQ03393 145 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 ADCY2Q08462 1091 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 ISXQ2M1V0 245 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms