RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 EPHB2P29323 1055 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 SERPINA4P29622 427 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 OAS2P29728 719 aaKnown RBP12.48□□□□□ -0.41
SNX29-207ENST00000568949 CSF2RBP32927 897 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 MAN1A1P33908 653 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 HDAC4P56524 1084 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 NOMO3P69849 1222 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 GPLD1P80108 840 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 ABHD18Q0P651 414 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 DEFB109BQ30KR1 87 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 TAF3Q5VWG9 929 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 NKAIN2Q5VXU1 208 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 NAA35Q5VZE5 725 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 ANKS6Q68DC2 871 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 DPPA4Q7L190 304 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 FAM129CQ86XR2 697 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 NRSN1Q8IZ57 195 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 NAGSQ8N159 534 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 UMODL1-AS1Q8N2C9 162 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 CCDC185Q8N715 623 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 BMPERQ8N8U9 685 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 CPA5Q8WXQ8 436 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 ECHDC3Q96DC8 303 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 RTP4Q96DX8 246 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 ZPBPQ9BS86 351 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 TRIT1Q9H3H1 467 aaKnown RBP12.48□□□□□ -0.41
SNX29-207ENST00000568949 ATP13A3Q9H7F0 1226 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 PDFQ9HBH1 243 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 PHPT1Q9NRX4 125 aaPredicted RBP12.48□□□□□ -0.41
SNX29-207ENST00000568949 RWDD2AQ9UIY3 292 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 FAM170AA1A519 330 aa12.47□□□□□ -0.41
SNX29-207ENST00000568949 TEX33O43247 280 aa12.47□□□□□ -0.41
SNX29-207ENST00000568949 CEACAM5P06731 702 aa12.47□□□□□ -0.41
SNX29-207ENST00000568949 POLR2LP62875 67 aaKnown RBP12.47□□□□□ -0.41
SNX29-207ENST00000568949 MC2RQ01718 297 aa12.47□□□□□ -0.41
SNX29-207ENST00000568949 DPY19L2P1Q6NXN4 242 aa12.47□□□□□ -0.41
SNX29-207ENST00000568949 SLFN11Q7Z7L1 901 aa12.47□□□□□ -0.41
SNX29-207ENST00000568949 PELI3Q8N2H9 469 aa12.47□□□□□ -0.41
SNX29-207ENST00000568949 GPT2Q8TD30 523 aa12.47□□□□□ -0.41
SNX29-207ENST00000568949 TEX101Q9BY14 249 aa12.47□□□□□ -0.41
SNX29-207ENST00000568949 FRMD8Q9BZ67 464 aaPredicted RBP12.47□□□□□ -0.41
SNX29-207ENST00000568949 CATSPERBQ9H7T0 1116 aa12.47□□□□□ -0.41
SNX29-207ENST00000568949 KCTD5Q9NXV2 234 aa12.47□□□□□ -0.41
SNX29-207ENST00000568949 KCNK4Q9NYG8 393 aa12.47□□□□□ -0.41
SNX29-207ENST00000568949 TMEM9Q9P0T7 183 aa12.47□□□□□ -0.41
SNX29-207ENST00000568949 TP53TG5Q9Y2B4 290 aa12.47□□□□□ -0.41
SNX29-207ENST00000568949 TMEM184BQ9Y519 407 aaPredicted RBP12.47□□□□□ -0.41
SNX29-207ENST00000568949 KCTD3Q9Y597 815 aa12.47□□□□□ -0.41
SNX29-207ENST00000568949 PRAMEF11O60813 436 aa12.46□□□□□ -0.41
SNX29-207ENST00000568949 FUCA1P04066 466 aa12.46□□□□□ -0.41
SNX29-207ENST00000568949 MMEP08473 750 aa12.46□□□□□ -0.41
SNX29-207ENST00000568949 TCN2P20062 427 aa12.46□□□□□ -0.41
SNX29-207ENST00000568949 MMP8P22894 467 aa12.46□□□□□ -0.41
SNX29-207ENST00000568949 MPSTP25325 297 aa12.46□□□□□ -0.41
SNX29-207ENST00000568949 AK4P27144 223 aaPredicted RBP12.46□□□□□ -0.41
SNX29-207ENST00000568949 ERCC5P28715 1186 aaPredicted RBP12.46□□□□□ -0.41
SNX29-207ENST00000568949 MTIF2P46199 727 aaKnown RBP12.46□□□□□ -0.41
SNX29-207ENST00000568949 ACOX1Q15067 660 aa12.46□□□□□ -0.41
SNX29-207ENST00000568949 HIST2H2BCQ6DN03 193 aa12.46□□□□□ -0.41
SNX29-207ENST00000568949 TCTN3Q6NUS6 607 aa12.46□□□□□ -0.41
SNX29-207ENST00000568949 SLC30A9Q6PML9 568 aa12.46□□□□□ -0.41
SNX29-207ENST00000568949 CEACAM20Q6UY09 585 aa12.46□□□□□ -0.41
SNX29-207ENST00000568949 TIPARPQ7Z3E1 657 aaKnown RBP12.46□□□□□ -0.41
SNX29-207ENST00000568949 SRLQ86TD4 932 aa12.46□□□□□ -0.41
SNX29-207ENST00000568949 NOP9Q86U38 636 aaKnown RBP12.46□□□□□ -0.41
SNX29-207ENST00000568949 TEX19Q8NA77 164 aa12.46□□□□□ -0.41
SNX29-207ENST00000568949 JOSD2Q8TAC2 188 aa12.46□□□□□ -0.41
SNX29-207ENST00000568949 FAM172AQ8WUF8 416 aa12.46□□□□□ -0.41
SNX29-207ENST00000568949 PATE1Q8WXA2 126 aa12.46□□□□□ -0.41
SNX29-207ENST00000568949 STARD8Q92502 1023 aa12.46□□□□□ -0.41
SNX29-207ENST00000568949 COQ10AQ96MF6 247 aa12.46□□□□□ -0.41
SNX29-207ENST00000568949 FBXO8Q9NRD0 319 aa12.46□□□□□ -0.41
SNX29-207ENST00000568949 DONSONQ9NYP3 566 aa12.46□□□□□ -0.41
SNX29-207ENST00000568949 SUFUQ9UMX1 484 aa12.46□□□□□ -0.41
SNX29-207ENST00000568949 ESPL1Q14674 2120 aa12.46□□□□□ -0.42
SNX29-207ENST00000568949 UTP20O75691 2785 aaKnown RBP12.46□□□□□ -0.42
SNX29-207ENST00000568949 MKRN2OSH3BPM6 223 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 FGF10O15520 208 aaPredicted RBP12.45□□□□□ -0.42
SNX29-207ENST00000568949 AGFG2O95081 481 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 IVLP07476 585 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 KRT7P08729 469 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 TEAD1P28347 426 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 ADCY8P40145 1251 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 GNPDA1P46926 289 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 RGRP47804 291 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 FASLGP48023 281 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 NDST2P52849 883 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 COPB1P53618 953 aaKnown RBP12.45□□□□□ -0.42
SNX29-207ENST00000568949 MLLT10P55197 1068 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 CTBSQ01459 385 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 BCL2L1Q07817 233 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 MAP7Q14244 749 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 MAN2A1Q16706 1144 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 FHL5Q5TD97 284 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 KDELC2Q7Z4H8 507 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 ARHGAP22Q7Z5H3 698 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 HEATR4Q86WZ0 1026 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 ZNF677Q86XU0 584 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 UNC5BQ8IZJ1 945 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 PYROXD2Q8N2H3 581 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms