RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 C6orf163Q5TEZ5 329 aa23.32■■□□□ 1.32
LINC00543-201ENST00000567234 FOXB2Q5VYV0 432 aa23.32■■□□□ 1.32
LINC00543-201ENST00000567234 RBM12BQ8IXT5 1001 aaKnown RBP23.32■■□□□ 1.32
LINC00543-201ENST00000567234 BLOC1S5Q8TDH9 187 aa23.32■■□□□ 1.32
LINC00543-201ENST00000567234 KCTD4Q8WVF5 259 aa23.32■■□□□ 1.32
LINC00543-201ENST00000567234 SPATA16Q9BXB7 569 aa23.32■■□□□ 1.32
LINC00543-201ENST00000567234 LRRC3Q9BY71 257 aa23.32■■□□□ 1.32
LINC00543-201ENST00000567234 INSL6Q9Y581 213 aa23.32■■□□□ 1.32
LINC00543-201ENST00000567234 TARM1B6A8C7 271 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 ZMPSTE24O75844 475 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 KITP10721 976 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 IMPDH2P12268 514 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 ALOX15P16050 662 aaPredicted RBP23.31■■□□□ 1.32
LINC00543-201ENST00000567234 HOXB8P17481 243 aaPredicted RBP23.31■■□□□ 1.32
LINC00543-201ENST00000567234 RGRP47804 291 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 GALNT3Q14435 633 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 TBCCQ15814 346 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 RALGPS1Q5JS13 557 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 GAREM2Q75VX8 874 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 PTAR1Q7Z6K3 402 aaPredicted RBP23.31■■□□□ 1.32
LINC00543-201ENST00000567234 TMC8Q8IU68 726 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 NRG4Q8WWG1 115 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 GPR78Q96P69 363 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 TDRD1Q9BXT4 1180 aaKnown RBP23.31■■□□□ 1.32
LINC00543-201ENST00000567234 ZDHHC7Q9NXF8 308 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 OR51B4Q9Y5P0 310 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 FCHO1O14526 889 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 TBX10O75333 385 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 LYPLA1O75608 230 aaPredicted RBP23.31■■□□□ 1.32
LINC00543-201ENST00000567234 CXCL14O95715 111 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 SPATA31D3P0C874 917 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 AVPR1AP37288 418 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 LIPMQ5VYY2 423 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 LRRC8EQ6NSJ5 796 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 SPATA31D4Q6ZUB0 917 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 HTR3DQ70Z44 454 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 CPXM2Q8N436 756 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 FSTL5Q8N475 847 aaPredicted RBP23.31■■□□□ 1.32
LINC00543-201ENST00000567234 CARNMT1Q8N4J0 409 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 KLHL23Q8NBE8 558 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 PPP2R3CQ969Q6 453 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 PPP1R14BQ96C90 147 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 FEM1AQ9BSK4 669 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 MARCOQ9UEW3 520 aaPredicted RBP23.31■■□□□ 1.32
LINC00543-201ENST00000567234 SORCS3Q9UPU3 1222 aa23.31■■□□□ 1.32
LINC00543-201ENST00000567234 SMIM31A0A1B0GVY4 71 aa23.3■■□□□ 1.32
LINC00543-201ENST00000567234 GLP2RO95838 553 aa23.3■■□□□ 1.32
LINC00543-201ENST00000567234 S1PR4O95977 384 aa23.3■■□□□ 1.32
LINC00543-201ENST00000567234 LYNP07948 512 aa23.3■■□□□ 1.32
LINC00543-201ENST00000567234 SBK3P0C264 359 aa23.3■■□□□ 1.32
LINC00543-201ENST00000567234 ASPHQ12797 758 aa23.3■■□□□ 1.32
LINC00543-201ENST00000567234 LSAMPQ13449 338 aa23.3■■□□□ 1.32
LINC00543-201ENST00000567234 MRNIPQ6NTE8 343 aa23.3■■□□□ 1.32
LINC00543-201ENST00000567234 ELMOD1Q8N336 334 aa23.3■■□□□ 1.32
LINC00543-201ENST00000567234 SCYL1Q96KG9 808 aa23.3■■□□□ 1.32
LINC00543-201ENST00000567234 TBATAQ96M53 351 aa23.3■■□□□ 1.32
LINC00543-201ENST00000567234 MRPL57Q9BQC6 102 aaKnown RBP23.3■■□□□ 1.32
LINC00543-201ENST00000567234 KCTD3Q9Y597 815 aa23.3■■□□□ 1.32
LINC00543-201ENST00000567234 IRAK3Q9Y616 596 aa23.3■■□□□ 1.32
LINC00543-201ENST00000567234 ARL5AQ9Y689 179 aa23.3■■□□□ 1.32
LINC00543-201ENST00000567234 GBF1Q92538 1859 aa23.3■■□□□ 1.32
LINC00543-201ENST00000567234 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.29■■□□□ 1.32
LINC00543-201ENST00000567234 AURKAO14965 403 aa23.29■■□□□ 1.32
LINC00543-201ENST00000567234 TMCC1O94876 653 aa23.29■■□□□ 1.32
LINC00543-201ENST00000567234 CD160O95971 181 aa23.29■■□□□ 1.32
LINC00543-201ENST00000567234 OGNP20774 298 aaKnown RBP23.29■■□□□ 1.32
LINC00543-201ENST00000567234 SLC26A3P40879 764 aa23.29■■□□□ 1.32
LINC00543-201ENST00000567234 ZXDBP98169 803 aa23.29■■□□□ 1.32
LINC00543-201ENST00000567234 TAF1AQ15573 450 aaPredicted RBP23.29■■□□□ 1.32
LINC00543-201ENST00000567234 LIN52Q52LA3 116 aa23.29■■□□□ 1.32
LINC00543-201ENST00000567234 MPP7Q5T2T1 576 aa23.29■■□□□ 1.32
LINC00543-201ENST00000567234 ALDH16A1Q8IZ83 802 aa23.29■■□□□ 1.32
LINC00543-201ENST00000567234 ST13P4Q8IZP2 240 aaPredicted RBP23.29■■□□□ 1.32
LINC00543-201ENST00000567234 DNAJC1Q96KC8 554 aaKnown RBP23.29■■□□□ 1.32
LINC00543-201ENST00000567234 NSMCE3Q96MG7 304 aa23.29■■□□□ 1.32
LINC00543-201ENST00000567234 MRPL46Q9H2W6 279 aaKnown RBP23.29■■□□□ 1.32
LINC00543-201ENST00000567234 NLE1Q9NVX2 485 aaPredicted RBP23.29■■□□□ 1.32
LINC00543-201ENST00000567234 DNAJC28Q9NX36 388 aa23.29■■□□□ 1.32
LINC00543-201ENST00000567234 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.29■■□□□ 1.32
LINC00543-201ENST00000567234 C2orf71A6NGG8 1288 aa23.29■■□□□ 1.32
LINC00543-201ENST00000567234 TK2O00142 265 aa23.29■■□□□ 1.32
LINC00543-201ENST00000567234 MAP3K13O43283 966 aa23.29■■□□□ 1.32
LINC00543-201ENST00000567234 FKBP6O75344 327 aa23.29■■□□□ 1.32
LINC00543-201ENST00000567234 PRLP01236 227 aa23.29■■□□□ 1.32
LINC00543-201ENST00000567234 PABPC4LP0CB38 370 aaKnown RBP23.29■■□□□ 1.32
LINC00543-201ENST00000567234 CA8P35219 290 aa23.29■■□□□ 1.32
LINC00543-201ENST00000567234 HK2P52789 917 aa23.29■■□□□ 1.32
LINC00543-201ENST00000567234 ZNF789Q5FWF6 425 aa23.29■■□□□ 1.32
LINC00543-201ENST00000567234 FSCBQ5H9T9 825 aa23.29■■□□□ 1.32
LINC00543-201ENST00000567234 RBM20Q5T481 1227 aaKnown RBP23.29■■□□□ 1.32
LINC00543-201ENST00000567234 FAM109BQ6ICB4 259 aaPredicted RBP23.29■■□□□ 1.32
LINC00543-201ENST00000567234 AAGABQ6PD74 315 aa23.29■■□□□ 1.32
LINC00543-201ENST00000567234 TMC7Q7Z402 723 aa23.29■■□□□ 1.32
LINC00543-201ENST00000567234 SPRED2Q7Z698 418 aa23.29■■□□□ 1.32
LINC00543-201ENST00000567234 DCAF4L2Q8NA75 395 aa23.29■■□□□ 1.32
LINC00543-201ENST00000567234 NXNL1Q96CM4 212 aa23.29■■□□□ 1.32
LINC00543-201ENST00000567234 ALG14Q96F25 216 aa23.29■■□□□ 1.32
LINC00543-201ENST00000567234 NDNQ99608 321 aa23.29■■□□□ 1.32
LINC00543-201ENST00000567234 ADGRE3Q9BY15 652 aa23.29■■□□□ 1.32
LINC00543-201ENST00000567234 DNMT3BQ9UBC3 853 aaKnown RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms