RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 TSTD2Q5T7W7 516 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 ZNF470Q6ECI4 717 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 NEPROQ6NW34 567 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 LRRC69Q6ZNQ3 347 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 ZC3HC1Q86WB0 502 aaKnown RBP6.25□□□□□ -1.41
CHD9-217ENST00000565832 CEP97Q8IW35 865 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 LPCAT1Q8NF37 534 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 FIBINQ8TAL6 211 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 TTC8Q8TAM2 541 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 SMG7Q92540 1137 aaKnown RBP6.25□□□□□ -1.41
CHD9-217ENST00000565832 ZNF75CPQ92670 426 aaPredicted RBP6.25□□□□□ -1.41
CHD9-217ENST00000565832 VOPP1Q96AW1 172 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 EID2BQ96D98 161 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 SGSM3Q96HU1 749 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 APOPT1Q96IL0 206 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 DNAJC1Q96KC8 554 aaKnown RBP6.25□□□□□ -1.41
CHD9-217ENST00000565832 MAGEB18Q96M61 343 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 ZNF599Q96NL3 588 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 RBBP8Q99708 897 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 CPNE1Q99829 537 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 BBS2Q9BXC9 721 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 C20orf27Q9GZN8 174 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 MTG2Q9H4K7 406 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 CCDC134Q9H6E4 229 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 SNX15Q9NRS6 342 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 TMEM216Q9P0N5 145 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 SENP1Q9P0U3 644 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 LHX3Q9UBR4 397 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 EVLQ9UI08 416 aaPredicted RBP6.25□□□□□ -1.41
CHD9-217ENST00000565832 EMCNQ9ULC0 261 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 CRYL1Q9Y2S2 319 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 RWDD3Q9Y3V2 267 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 DMDP11532 3685 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 HEATR9A2RTY3 570 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 TYW5A2RUC4 315 aaKnown RBP6.24□□□□□ -1.41
CHD9-217ENST00000565832 ANKRD66B4E2M5 251 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 XYLBO75191 536 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 ZNF189O75820 626 aaPredicted RBP6.24□□□□□ -1.41
CHD9-217ENST00000565832 ZWINTO95229 277 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 TYRP14679 529 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 BGNP21810 368 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 VAMP1P23763 118 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 RHOAP61586 193 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 IFT88Q13099 833 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 SEMA3AQ14563 771 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 PLEKHG6Q3KR16 790 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 FUT11Q495W5 492 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 ACCSLQ4AC99 568 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 MPPE1Q53F39 396 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 TCEAL5Q5H9L2 206 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 LRRC73Q5JTD7 316 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 RBM20Q5T481 1227 aaKnown RBP6.24□□□□□ -1.41
CHD9-217ENST00000565832 GRTP1Q5TC63 336 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 NAIF1Q69YI7 327 aaPredicted RBP6.24□□□□□ -1.41
CHD9-217ENST00000565832 PDPK2PQ6A1A2 396 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 ALG1LQ6GMV1 187 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 ATG14Q6ZNE5 492 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 ZCCHC23Q6ZST2 131 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 PIGWQ7Z7B1 504 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 SLC41A1Q8IVJ1 513 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 SFTPA1Q8IWL2 248 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 EFHBQ8N7U6 833 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 CYB5D2Q8WUJ1 264 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 IRF7Q92985 503 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 ASIC4Q96FT7 647 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 ABHD8Q96I13 439 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 VPS39Q96JC1 886 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 LMLNQ96KR4 655 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 TDRD1Q9BXT4 1180 aaKnown RBP6.24□□□□□ -1.41
CHD9-217ENST00000565832 PITPNM3Q9BZ71 974 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 FAM96AQ9H5X1 160 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.24□□□□□ -1.419e-7■■■■□ 20.9
CHD9-217ENST00000565832 CPSF2Q9P2I0 782 aaKnown RBP6.24□□□□□ -1.41
CHD9-217ENST00000565832 PRKAG3Q9UGI9 489 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 GPC6Q9Y625 555 aaPredicted RBP6.24□□□□□ -1.41
CHD9-217ENST00000565832 HELZP42694 1942 aaKnown RBP6.24□□□□□ -1.41
CHD9-217ENST00000565832 A0A096LPK6 155 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 CCDC162PA2VCL2 907 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 NDST3O95803 873 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 LATS1O95835 1130 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 RECKO95980 971 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 GOT2P00505 430 aaKnown RBP6.24□□□□□ -1.41
CHD9-217ENST00000565832 C2P06681 752 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 DHRS4L1P0CG22 281 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 CRHR1P34998 444 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 SPRP35270 261 aaPredicted RBP6.24□□□□□ -1.41
CHD9-217ENST00000565832 GLRBP48167 497 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 SERPINB9P50453 376 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 LIMK2P53671 638 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 SLC18A1P54219 525 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 THOC5Q13769 683 aaKnown RBP6.24□□□□□ -1.41
CHD9-217ENST00000565832 ZNF77Q15935 545 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 PDK4Q16654 411 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 SPRED3Q2MJR0 410 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 ARHGAP15Q53QZ3 475 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 PITRM1Q5JRX3 1037 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 FAM78AQ5JUQ0 283 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 RARS2Q5T160 578 aaKnown RBP6.24□□□□□ -1.41
CHD9-217ENST00000565832 N4BP2L1Q5TBK1 243 aaPredicted RBP6.24□□□□□ -1.41
CHD9-217ENST00000565832 GKAP1Q5VSY0 366 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms