RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 TMEM253P0C7T8 217 aa18.54■□□□□ 0.56
CLN6-204ENST00000564752 ELFN1P0C7U0 828 aa18.54■□□□□ 0.56
CLN6-204ENST00000564752 AP1S1P61966 158 aa18.54■□□□□ 0.56
CLN6-204ENST00000564752 CCL7P80098 99 aa18.54■□□□□ 0.56
CLN6-204ENST00000564752 RHDQ02161 417 aa18.54■□□□□ 0.56
CLN6-204ENST00000564752 ZNF235Q14590 738 aa18.54■□□□□ 0.56
CLN6-204ENST00000564752 LBRQ14739 615 aaKnown RBP18.54■□□□□ 0.56
CLN6-204ENST00000564752 OGFOD3Q6PK18 319 aa18.54■□□□□ 0.56
CLN6-204ENST00000564752 CLEC14AQ86T13 490 aa18.54■□□□□ 0.56
CLN6-204ENST00000564752 CNGA4Q8IV77 575 aa18.54■□□□□ 0.56
CLN6-204ENST00000564752 GPR156Q8NFN8 814 aa18.54■□□□□ 0.56
CLN6-204ENST00000564752 OR56A4Q8NGH8 313 aa18.54■□□□□ 0.56
CLN6-204ENST00000564752 SNRNP27Q8WVK2 155 aaKnown RBP18.54■□□□□ 0.56
CLN6-204ENST00000564752 OR1E3Q8WZA6 343 aa18.54■□□□□ 0.56
CLN6-204ENST00000564752 SPOCK2Q92563 424 aa18.54■□□□□ 0.56
CLN6-204ENST00000564752 CCDC97Q96F63 343 aaPredicted RBP18.54■□□□□ 0.56
CLN6-204ENST00000564752 PDXPQ96GD0 296 aa18.54■□□□□ 0.56
CLN6-204ENST00000564752 LIN37Q96GY3 246 aaPredicted RBP18.54■□□□□ 0.56
CLN6-204ENST00000564752 GFM1Q96RP9 751 aaKnown RBP18.54■□□□□ 0.56
CLN6-204ENST00000564752 SYNDIG1Q9H7V2 258 aa18.54■□□□□ 0.56
CLN6-204ENST00000564752 LRRK1Q38SD2 2015 aa18.54■□□□□ 0.56
CLN6-204ENST00000564752 A0A1W2PQM1 296 aa18.53■□□□□ 0.56
CLN6-204ENST00000564752 TMX2-CTNND1H3BSU7 103 aa18.53■□□□□ 0.56
CLN6-204ENST00000564752 TNFRSF10CO14798 259 aa18.53■□□□□ 0.56
CLN6-204ENST00000564752 SLC10A7Q0GE19 358 aa18.53■□□□□ 0.56
CLN6-204ENST00000564752 B3GNT8Q7Z7M8 397 aa18.53■□□□□ 0.56
CLN6-204ENST00000564752 BBS5Q8N3I7 341 aa18.53■□□□□ 0.56
CLN6-204ENST00000564752 WBP1Q96G27 269 aa18.53■□□□□ 0.56
CLN6-204ENST00000564752 CCDC42Q96M95 316 aa18.53■□□□□ 0.56
CLN6-204ENST00000564752 CHP1Q99653 195 aa18.53■□□□□ 0.56
CLN6-204ENST00000564752 FGF22Q9HCT0 170 aa18.53■□□□□ 0.56
CLN6-204ENST00000564752 SPTLC3Q9NUV7 552 aa18.53■□□□□ 0.56
CLN6-204ENST00000564752 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.52■□□□□ 0.56
CLN6-204ENST00000564752 TTC24A2A3L6 582 aaPredicted RBP18.52■□□□□ 0.56
CLN6-204ENST00000564752 A8MX80 341 aa18.52■□□□□ 0.56
CLN6-204ENST00000564752 HTRA2O43464 458 aaPredicted RBP18.52■□□□□ 0.56
CLN6-204ENST00000564752 PEX11BO96011 259 aa18.52■□□□□ 0.56
CLN6-204ENST00000564752 RPLP0P05388 317 aaKnown RBP18.52■□□□□ 0.56
CLN6-204ENST00000564752 ITGA2BP08514 1039 aa18.52■□□□□ 0.56
CLN6-204ENST00000564752 CD48P09326 243 aa18.52■□□□□ 0.56
CLN6-204ENST00000564752 KELP23276 732 aa18.52■□□□□ 0.56
CLN6-204ENST00000564752 HSPA9P38646 679 aaKnown RBP18.52■□□□□ 0.56
CLN6-204ENST00000564752 VAC14Q08AM6 782 aa18.52■□□□□ 0.56
CLN6-204ENST00000564752 MMRN1Q13201 1228 aa18.52■□□□□ 0.56
CLN6-204ENST00000564752 PNCKQ6P2M8 343 aa18.52■□□□□ 0.56
CLN6-204ENST00000564752 TAF8Q7Z7C8 310 aa18.52■□□□□ 0.56
CLN6-204ENST00000564752 CPNE8Q86YQ8 564 aa18.52■□□□□ 0.56
CLN6-204ENST00000564752 PELI3Q8N2H9 469 aa18.52■□□□□ 0.56
CLN6-204ENST00000564752 ZNF843Q8N446 348 aa18.52■□□□□ 0.56
CLN6-204ENST00000564752 NSMCE1Q8WV22 266 aa18.52■□□□□ 0.56
CLN6-204ENST00000564752 COQ10AQ96MF6 247 aa18.52■□□□□ 0.56
CLN6-204ENST00000564752 LGR4Q9BXB1 951 aa18.52■□□□□ 0.56
CLN6-204ENST00000564752 LRRN3Q9H3W5 708 aa18.52■□□□□ 0.56
CLN6-204ENST00000564752 NHEJ1Q9H9Q4 299 aaPredicted RBP18.52■□□□□ 0.56
CLN6-204ENST00000564752 MRPL40Q9NQ50 206 aaKnown RBP18.52■□□□□ 0.56
CLN6-204ENST00000564752 B4GALT6Q9UBX8 382 aa18.52■□□□□ 0.56
CLN6-204ENST00000564752 APPL1Q9UKG1 709 aa18.52■□□□□ 0.56
CLN6-204ENST00000564752 AKR1B15C9JRZ8 316 aaPredicted RBP18.51■□□□□ 0.55
CLN6-204ENST00000564752 D6RAR5 112 aa18.51■□□□□ 0.55
CLN6-204ENST00000564752 PLD2O14939 933 aa18.51■□□□□ 0.55
CLN6-204ENST00000564752 MAFKO60675 156 aa18.51■□□□□ 0.55
CLN6-204ENST00000564752 KRT7P08729 469 aa18.51■□□□□ 0.55
CLN6-204ENST00000564752 CR2P20023 1033 aa18.51■□□□□ 0.55
CLN6-204ENST00000564752 MAN1A1P33908 653 aa18.51■□□□□ 0.55
CLN6-204ENST00000564752 EIF3IQ13347 325 aaKnown RBP18.51■□□□□ 0.55
CLN6-204ENST00000564752 DPYSL3Q14195 570 aa18.51■□□□□ 0.55
CLN6-204ENST00000564752 ACOX1Q15067 660 aa18.51■□□□□ 0.55
CLN6-204ENST00000564752 TAF1BQ53T94 588 aaPredicted RBP18.51■□□□□ 0.55
CLN6-204ENST00000564752 ZFYVE27Q5T4F4 411 aa18.51■□□□□ 0.55
CLN6-204ENST00000564752 SARM1Q6SZW1 724 aa18.51■□□□□ 0.55
CLN6-204ENST00000564752 CBARPQ8N350 705 aaPredicted RBP18.51■□□□□ 0.55
CLN6-204ENST00000564752 KCTD6Q8NC69 237 aa18.51■□□□□ 0.55
CLN6-204ENST00000564752 FAM46DQ8NEK8 389 aa18.51■□□□□ 0.55
CLN6-204ENST00000564752 FAM71BQ8TC56 605 aa18.51■□□□□ 0.55
CLN6-204ENST00000564752 ZNF670Q9BS34 389 aa18.51■□□□□ 0.55
CLN6-204ENST00000564752 TRIM5Q9C035 493 aa18.51■□□□□ 0.55
CLN6-204ENST00000564752 TMEM168Q9H0V1 697 aa18.51■□□□□ 0.55
CLN6-204ENST00000564752 EPB41L5Q9HCM4 733 aa18.51■□□□□ 0.55
CLN6-204ENST00000564752 PCDHGC4Q9Y5F7 938 aa18.51■□□□□ 0.55
CLN6-204ENST00000564752 A0A1W2PQ67 120 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 MFSD11O43934 449 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 NOBOXO60393 691 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 SOCS5O75159 536 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 PNLIPP16233 465 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 GLB1P16278 677 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 IL4RP24394 825 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 CCKBRP32239 447 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 UGT1A5P35504 534 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 ARSEP51690 589 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 INHBCP55103 352 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 TAS2R40P59535 323 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 CFHR1Q03591 330 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 MESDQ14696 234 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 PDK2Q15119 407 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 ATP13A4Q4VNC1 1196 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 CERCAMQ5T4B2 595 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 RAB11FIP2Q7L804 512 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 MAP7D3Q8IWC1 876 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 PGBD5Q8N414 524 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 FBXO39Q8N4B4 442 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms