RNA–Protein interactions for RNA: ENST00000562656.1

AC009055.1-201, humanhuman

TSL 3 BASIC

Gene AC009055.1, Length 781 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009055.1-201ENST00000562656 UVRAGQ9P2Y5 699 aa13.12□□□□□ -0.31
AC009055.1-201ENST00000562656 AMACRQ9UHK6 382 aa13.12□□□□□ -0.31
AC009055.1-201ENST00000562656 APPL1Q9UKG1 709 aa13.12□□□□□ -0.31
AC009055.1-201ENST00000562656 NENFQ9UMX5 172 aa13.12□□□□□ -0.31
AC009055.1-201ENST00000562656 SSUH2Q9Y2M2 353 aa13.12□□□□□ -0.31
AC009055.1-201ENST00000562656 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.12□□□□□ -0.31
AC009055.1-201ENST00000562656 A0A1W2PNU3 283 aaPredicted RBP13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 CDRT15L2A8MXV6 281 aa13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 ATXN7O15265 892 aaPredicted RBP13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 GYPCP04921 128 aa13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 TPM3P06753 285 aa13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 GLB1P16278 677 aa13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 ARSEP51690 589 aa13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 GALNT2Q10471 571 aa13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 TRAF2Q12933 501 aa13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 ARHGEF7Q14155 803 aa13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 PAFAH1B3Q15102 231 aaKnown RBP13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 PDK2Q15119 407 aa13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 ARMC12Q5T9G4 340 aa13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 ALG1LQ6GMV1 187 aa13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 TIGD7Q6NT04 549 aaPredicted RBP13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 USP45Q70EL2 814 aa13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 TAF8Q7Z7C8 310 aa13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 CLEC14AQ86T13 490 aa13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 MAP7D3Q8IWC1 876 aa13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 RAVER1Q8IY67 606 aaKnown RBP13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 ZNF564Q8TBZ8 553 aaPredicted RBP13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 KCNE4Q8WWG9 221 aa13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 MAML1Q92585 1016 aa13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 DTD2Q96FN9 168 aa13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 TMEM74Q96NL1 305 aa13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 TSGA13Q96PP4 275 aa13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 GFM1Q96RP9 751 aaKnown RBP13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 ZNF670Q9BS34 389 aa13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 LGR4Q9BXB1 951 aa13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 POLR1EQ9GZS1 481 aaKnown RBP13.11□□□□□ -0.31
AC009055.1-201ENST00000562656 PRSS38A1L453 326 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 TTC24A2A3L6 582 aaPredicted RBP13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 A8MX80 341 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 D6RAR5 112 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 MATN3O15232 486 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 FZD6O60353 706 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 NOBOXO60393 691 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 PROSCO94903 275 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 ITGA2BP08514 1039 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 LHCGRP22888 699 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 CCNCP24863 283 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 CASP14P31944 242 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 CCKBRP32239 447 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 GARSP41250 739 aaKnown RBP13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 TMPRSS3P57727 454 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 MAXP61244 160 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 DPTQ07507 201 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 PEX6Q13608 980 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 DPYSL3Q14195 570 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 IFI16Q16666 785 aaKnown RBP13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 C14orf28Q4W4Y0 310 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 CERCAMQ5T4B2 595 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 KCTD16Q68DU8 428 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 NYAP1Q6ZVC0 841 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 NLRP8Q86W28 1048 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 PELI3Q8N2H9 469 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 FAM46DQ8NEK8 389 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 KIAA1524Q8TCG1 905 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 GPBAR1Q8TDU6 330 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 SNRNP27Q8WVK2 155 aaKnown RBP13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 PIH1D2Q8WWB5 315 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 STRADBQ9C0K7 418 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 TMEM168Q9H0V1 697 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 LRRN3Q9H3W5 708 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 CYP4F12Q9HCS2 524 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 MRPL40Q9NQ50 206 aaKnown RBP13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 TRNAU1APQ9NX07 287 aaKnown RBP13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 IFNKQ9P0W0 207 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 RABGEF1Q9UJ41 708 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 DNPEPQ9ULA0 475 aa13.1□□□□□ -0.31
AC009055.1-201ENST00000562656 A0A1W2PQM1 296 aa13.09□□□□□ -0.31
AC009055.1-201ENST00000562656 NPIPB15A6NHN6 443 aaPredicted RBP13.09□□□□□ -0.31
AC009055.1-201ENST00000562656 NUDT21O43809 227 aaKnown RBP13.09□□□□□ -0.31
AC009055.1-201ENST00000562656 RPLP0P05388 317 aaKnown RBP13.09□□□□□ -0.31
AC009055.1-201ENST00000562656 CEACAM5P06731 702 aa13.09□□□□□ -0.31
AC009055.1-201ENST00000562656 PYGLP06737 847 aa13.09□□□□□ -0.31
AC009055.1-201ENST00000562656 KRT7P08729 469 aa13.09□□□□□ -0.31
AC009055.1-201ENST00000562656 CD48P09326 243 aa13.09□□□□□ -0.31
AC009055.1-201ENST00000562656 H2AFZP0C0S5 128 aa13.09□□□□□ -0.31
AC009055.1-201ENST00000562656 CCNB1P14635 433 aa13.09□□□□□ -0.31
AC009055.1-201ENST00000562656 ZNF30P17039 623 aa13.09□□□□□ -0.31
AC009055.1-201ENST00000562656 MX2P20592 715 aa13.09□□□□□ -0.31
AC009055.1-201ENST00000562656 CA4P22748 312 aa13.09□□□□□ -0.31
AC009055.1-201ENST00000562656 ETV3P41162 512 aa13.09□□□□□ -0.31
AC009055.1-201ENST00000562656 SSR1P43307 286 aaKnown RBP13.09□□□□□ -0.31
AC009055.1-201ENST00000562656 INHBCP55103 352 aa13.09□□□□□ -0.31
AC009055.1-201ENST00000562656 CXADRP78310 365 aa13.09□□□□□ -0.31
AC009055.1-201ENST00000562656 CCL7P80098 99 aa13.09□□□□□ -0.31
AC009055.1-201ENST00000562656 CDK3Q00526 305 aa13.09□□□□□ -0.31
AC009055.1-201ENST00000562656 HLTFQ14527 1009 aaKnown RBP eCLIP13.09□□□□□ -0.31
AC009055.1-201ENST00000562656 SLC18A3Q16572 532 aa13.09□□□□□ -0.31
AC009055.1-201ENST00000562656 ANKRD20A8PQ5CZ79 823 aa13.09□□□□□ -0.31
AC009055.1-201ENST00000562656 NCBP2-AS2Q69YL0 99 aa13.09□□□□□ -0.31
AC009055.1-201ENST00000562656 H2AFVQ71UI9 128 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms