RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	DSC2	Q02487	901 aa		7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	GAD2	Q05329	585 aa		7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	INCA1	Q0VD86	236 aa		7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	ZCWPW2	Q504Y3	356 aa		7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	USP39	Q53GS9	565 aa	Known RBP	7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	IL31	Q6EBC2	164 aa		7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	TPGS1	Q6ZTW0	290 aa		7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	TOGARAM2	Q6ZUX3	1019 aa		7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	HTR3D	Q70Z44	454 aa		7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	INTS8	Q75QN2	995 aa	Known RBP	7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	UNC93A	Q86WB7	457 aa		7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	GUF1	Q8N442	669 aa	Known RBP	7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	HMGB4	Q8WW32	186 aa		7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	PIGK	Q92643	395 aa		7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	CCDC47	Q96A33	483 aa	Known RBP	7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	ACOX2	Q99424	681 aa		7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	HNRNPAB	Q99729	332 aa	Known RBP	7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	CPPED1	Q9BRF8	314 aa	Predicted RBP	7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	CYP3A43	Q9HB55	503 aa		7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	ANLN	Q9NQW6	1124 aa		7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	TLR8	Q9NR97	1041 aa	Known RBP	7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	SPHK2	Q9NRA0	654 aa		7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	VPS45	Q9NRW7	570 aa		7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	TMEM140	Q9NV12	185 aa		7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	COMMD8	Q9NX08	183 aa		7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	PLK2	Q9NYY3	685 aa		7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	TBC1D14	Q9P2M4	693 aa		7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	SCML2	Q9UQR0	700 aa		7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	RUVBL1	Q9Y265	456 aa	Known RBP	7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	CACNA1B	Q00975	2339 aa		7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	KIAA1549L	Q6ZVL6	1849 aa		7.36	□□□□□ -1.23
MARK3-223	ENST00000561071	TCRBV21S2A2	A0A5A6	115 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	C4orf47	A7E2U8	309 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	CXorf49	A8MYA2	514 aa	Predicted RBP	7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	NEDD8-MDP1	E9PL57	170 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	TULP2	O00295	520 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	MAPK13	O15264	365 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	HOXC11	O43248	304 aa	Predicted RBP	7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	KLKB1	P03952	638 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	ADRB1	P08588	477 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	RAP2A	P10114	183 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	HK1	P19367	917 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	DDC	P20711	480 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	PRCP	P42785	496 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	PTGER3	P43115	390 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	TNFRSF4	P43489	277 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	DHPS	P49366	369 aa	Predicted RBP	7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	TUB	P50607	506 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	RAD23B	P54727	409 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	IRX4	P78413	519 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	LRMP	Q12912	555 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	SP140	Q13342	867 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	MTM1	Q13496	603 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	NFIL3	Q16649	462 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	C10orf120	Q5SQS8	335 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	C10orf76	Q5T2E6	689 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	PMS2CL	Q68D20	193 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	ANKRD40	Q6AI12	368 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	ISM2	Q6H9L7	571 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	OLIG1	Q8TAK6	271 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	ST8SIA2	Q92186	375 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	CNOT6L	Q96LI5	555 aa	Known RBP	7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	DMRTA2	Q96SC8	542 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	ADO	Q96SZ5	270 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	MYOC	Q99972	504 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	DUSP16	Q9BY84	665 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	CPEB1	Q9BZB8	566 aa	Known RBP	7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	IMPG2	Q9BZV3	1241 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	SCAND2P	Q9GZW5	306 aa	Predicted RBP	7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	FBXO44	Q9H4M3	255 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	TMEM8A	Q9HCN3	771 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	CISH	Q9NSE2	258 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	DNAJC17	Q9NVM6	304 aa	Known RBP	7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	BCCIP	Q9P287	314 aa	Known RBP eCLIP	7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	DEC1	Q9P2X7	70 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	CNOT11	Q9UKZ1	510 aa	Known RBP	7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	PCDHGA5	Q9Y5G8	931 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	MYO18A	Q92614	2054 aa	Known RBP	7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	MYH10	P35580	1976 aa		7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	KMT2B	Q9UMN6	2715 aa	Predicted RBP	7.35	□□□□□ -1.23
MARK3-223	ENST00000561071	USP24	Q9UPU5	2620 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	ATXN2	Q99700	1313 aa	Known RBP	7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	THADA	Q6YHU6	1953 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	LNP1	A1A4G5	178 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	TRIM49B	A6NDI0	452 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	WASH3P	C4AMC7	463 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	PRRT4	C9JH25	899 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	CETN3	O15182	167 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	AP1G1	O43747	822 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	MFAP3L	O75121	409 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	KCNK5	O95279	499 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	CALCA	P01258	141 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	CISD3	P0C7P0	127 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	TYR	P14679	529 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	GABRG2	P18507	467 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	LPO	P22079	712 aa	Predicted RBP	7.34	□□□□□ -1.23

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