RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 FAM25GB3EWG6 89 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 TACR2P21452 398 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 ALAS2P22557 587 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 SSR2P43308 183 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 FBXO30Q8TB52 745 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 DNAJB14Q8TBM8 379 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 PGM2Q96G03 612 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 PANX1Q96RD7 426 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 DPEP2Q9H4A9 486 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 RCOR3Q9P2K3 495 aaPredicted RBP13.48□□□□□ -0.25
TRAF3-208ENST00000560371 KLF15Q9UIH9 416 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 VPS4AQ9UN37 437 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 SLC9A8Q9Y2E8 581 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 GLYATL1P3A0A0U1RQE8 302 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 TMEM191CA6NGB0 347 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 DLGAP3O95886 979 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 RHOQP17081 205 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 ZNF605Q86T29 641 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 ARL14EPQ8N8R7 260 aaPredicted RBP13.47□□□□□ -0.25
TRAF3-208ENST00000560371 PRELID2Q8N945 189 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 JOSD2Q8TAC2 188 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 STYXQ8WUJ0 223 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 KCTD4Q8WVF5 259 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 AIF1LQ9BQI0 150 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 MRPS26Q9BYN8 205 aaKnown RBP13.47□□□□□ -0.25
TRAF3-208ENST00000560371 HDHD2Q9H0R4 259 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 EPHB6O15197 1021 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 CLOCKO15516 846 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 NDST3O95803 873 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 HGFP14210 728 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 PURAQ00577 322 aaKnown RBP13.47□□□□□ -0.25
TRAF3-208ENST00000560371 PRKG2Q13237 762 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 TEAD4Q15561 434 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 PMF1Q6P1K2 205 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 GALNT13Q8IUC8 556 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 AP2M1Q96CW1 435 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 SCLYQ96I15 445 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 CYLDQ9NQC7 956 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 PCDHB1Q9Y5F3 818 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 E7ENQ6 273 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 PDE5AO76074 875 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 MBTD1Q05BQ5 628 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 FUT2Q10981 343 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 CAPN13Q6MZZ7 669 aaPredicted RBP13.47□□□□□ -0.25
TRAF3-208ENST00000560371 PHF10Q8WUB8 498 aaKnown RBP13.47□□□□□ -0.25
TRAF3-208ENST00000560371 CLEC4DQ8WXI8 215 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 TNKS2Q9H2K2 1166 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 C11orf49Q9H6J7 331 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 GALNT8Q9NY28 637 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 NDUFA13Q9P0J0 144 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 ANGPT4Q9Y264 503 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 STX11O75558 287 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 PIAS1O75925 651 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 GNA12Q03113 381 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 INO80DQ53TQ3 878 aaPredicted RBP13.47□□□□□ -0.25
TRAF3-208ENST00000560371 SNX30Q5VWJ9 437 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 IZUMO2Q6UXV1 221 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 UXS1Q8NBZ7 420 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 PHC3Q8NDX5 983 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 RORBQ92753 470 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 DTNBP1Q96EV8 351 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 MARK4Q96L34 752 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 LEF1Q9UJU2 399 aaPredicted RBP13.47□□□□□ -0.25
TRAF3-208ENST00000560371 SLC31A1O15431 190 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 SLC6A2P23975 617 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 HTR7P34969 479 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 DRG2P55039 364 aaKnown RBP13.47□□□□□ -0.25
TRAF3-208ENST00000560371 PTSQ03393 145 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 EIF3MQ7L2H7 374 aaKnown RBP13.47□□□□□ -0.25
TRAF3-208ENST00000560371 SMYD1Q8NB12 490 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 AARSD1Q9BTE6 412 aaKnown RBP13.47□□□□□ -0.25
TRAF3-208ENST00000560371 POLMQ9NP87 494 aaPredicted RBP13.47□□□□□ -0.25
TRAF3-208ENST00000560371 EVPLQ92817 2033 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 POP4O95707 220 aaKnown RBP13.47□□□□□ -0.25
TRAF3-208ENST00000560371 IDSP22304 550 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 CENPIQ92674 756 aaPredicted RBP13.47□□□□□ -0.25
TRAF3-208ENST00000560371 KCTD5Q9NXV2 234 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 INSL6Q9Y581 213 aa13.47□□□□□ -0.25
TRAF3-208ENST00000560371 CENPXA8MT69 81 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 TSC22D2O75157 780 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 LRATO95237 230 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 RPL17P18621 184 aaKnown RBP13.46□□□□□ -0.25
TRAF3-208ENST00000560371 ITPKBP27987 946 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 RPL4P36578 427 aaKnown RBP13.46□□□□□ -0.25
TRAF3-208ENST00000560371 PKNOX1P55347 436 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 SEC13P55735 322 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 BNC1Q01954 994 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 PACS1Q6VY07 963 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.46□□□□□ -0.25
TRAF3-208ENST00000560371 SPATA6LQ8N4H0 392 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 ZNF276Q8N554 614 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 RP1P56715 2156 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 MYBPHLA2RUH7 354 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 IDH2P48735 452 aaKnown RBP13.46□□□□□ -0.25
TRAF3-208ENST00000560371 TLE2Q04725 743 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 TRIM16LQ309B1 348 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 SLC30A9Q6PML9 568 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 GPR180Q86V85 440 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 FAM84AQ96KN4 292 aa13.46□□□□□ -0.25
TRAF3-208ENST00000560371 SPRTNQ9H040 489 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms