RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 NCAM2O15394 837 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 BUD23O43709 281 aaKnown RBP5.26□□□□□ -1.57
SPG11-220ENST00000559933 GCATO75600 419 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 PIAS1O75925 651 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 STK10O94804 968 aaKnown RBP5.26□□□□□ -1.57
SPG11-220ENST00000559933 KLF8O95600 359 aaPredicted RBP5.26□□□□□ -1.57
SPG11-220ENST00000559933 APODP05090 189 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 UGT2B4P06133 528 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 EPHX1P07099 455 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 PDHA1P08559 390 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 DLDP09622 509 aaKnown RBP5.26□□□□□ -1.57
SPG11-220ENST00000559933 ATXN1LP0C7T5 689 aaKnown RBP5.26□□□□□ -1.57
SPG11-220ENST00000559933 TPH1P17752 444 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 ITIH2P19823 946 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 CR2P20023 1033 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 GRIA2P42262 883 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 KIR2DL1P43626 348 aaPredicted RBP5.26□□□□□ -1.57
SPG11-220ENST00000559933 LMAN1P49257 510 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 PLTPP55058 493 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 WNT3AP56704 352 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 SESN2P58004 480 aaPredicted RBP5.26□□□□□ -1.57
SPG11-220ENST00000559933 SEMA5AQ13591 1074 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 SLC12A1Q13621 1099 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 HNRNPDQ14103 355 aaKnown RBP5.26□□□□□ -1.57
SPG11-220ENST00000559933 HLTFQ14527 1009 aaKnown RBP eCLIP5.26□□□□□ -1.57
SPG11-220ENST00000559933 UBXN2BQ14CS0 331 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 CCDC38Q502W7 563 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 SLC44A4Q53GD3 710 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 TMEM196Q5HYL7 178 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 TMEM31Q5JXX7 168 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 CERCAMQ5T4B2 595 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 KCTD11Q693B1 232 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 RETSATQ6NUM9 610 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 HIBCHQ6NVY1 386 aaPredicted RBP5.26□□□□□ -1.57
SPG11-220ENST00000559933 NCEH1Q6PIU2 408 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 KDELC1Q6UW63 502 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 CES3Q6UWW8 571 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 DPY19L3Q6ZPD9 716 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 MAATS1Q7Z4T9 603 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 CAMK1DQ8IU85 385 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 IGDCC3Q8IVU1 814 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 STK40Q8N2I9 435 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 ZNF513Q8N8E2 541 aaPredicted RBP5.26□□□□□ -1.57
SPG11-220ENST00000559933 KIAA1958Q8N8K9 716 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 TXNDC5Q8NBS9 432 aaKnown RBP5.26□□□□□ -1.57
SPG11-220ENST00000559933 LPCAT1Q8NF37 534 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 FLCNQ8NFG4 579 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 OR2A12Q8NGT7 310 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 RPLP0P6Q8NHW5 317 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 UHMK1Q8TAS1 419 aaKnown RBP5.26□□□□□ -1.57
SPG11-220ENST00000559933 WFIKKN2Q8TEU8 576 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 PDCD6IPQ8WUM4 868 aaKnown RBP5.26□□□□□ -1.57
SPG11-220ENST00000559933 NSMCE1Q8WV22 266 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 UBE2Q2Q8WVN8 375 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 FAM3CQ92520 227 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 DNASE1L2Q92874 299 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 ART4Q93070 314 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 IMP4Q96G21 291 aaKnown RBP5.26□□□□□ -1.57
SPG11-220ENST00000559933 SNF8Q96H20 258 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 PSKH2Q96QS6 385 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 FCRL5Q96RD9 977 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 TBL1YQ9BQ87 522 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 TDRD1Q9BXT4 1180 aaKnown RBP5.26□□□□□ -1.57
SPG11-220ENST00000559933 SLC2A11Q9BYW1 496 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 POLR1EQ9GZS1 481 aaKnown RBP5.26□□□□□ -1.57
SPG11-220ENST00000559933 TMEM245Q9H330 911 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 SEMA6CQ9H3T2 930 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 PRDM16Q9HAZ2 1276 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 LRRC4CQ9HCJ2 640 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 GDF3Q9NR23 364 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 ARHGEF3Q9NR81 526 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 SLC2A4RGQ9NR83 387 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 IL1RAPL1Q9NZN1 696 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 SLC17A6Q9P2U8 582 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 GGT7Q9UJ14 662 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 ANAPC5Q9UJX4 755 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 FBXL21Q9UKT6 434 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 CHKBQ9Y259 395 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 HS3ST2Q9Y278 367 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 ITM2BQ9Y287 266 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 SPO11Q9Y5K1 396 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 OAS3Q9Y6K5 1087 aaKnown RBP5.26□□□□□ -1.57
SPG11-220ENST00000559933 STON1Q9Y6Q2 735 aa5.26□□□□□ -1.57
SPG11-220ENST00000559933 F5P12259 2224 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 A8MX80 341 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.25□□□□□ -1.57
SPG11-220ENST00000559933 E7EVH7 732 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 CCL22O00626 93 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 MTSS1O43312 755 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 LEFTY1O75610 366 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 AP2A1O95782 977 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 IGSF6O95976 241 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 PRLP01236 227 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 GSTP1P09211 210 aaKnown RBP5.25□□□□□ -1.57
SPG11-220ENST00000559933 ALPIP09923 528 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 CTPS1P17812 591 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 MGAT1P26572 445 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 STIP1P31948 543 aaKnown RBP5.25□□□□□ -1.57
SPG11-220ENST00000559933 SLC8A1P32418 973 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 ADMP35318 185 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms