RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 PPP1R16AQ96I34 528 aa12.2□□□□□ -0.46
HERC1-205ENST00000559886 TBATAQ96M53 351 aa12.2□□□□□ -0.46
HERC1-205ENST00000559886 PCDH12Q9NPG4 1184 aa12.2□□□□□ -0.46
HERC1-205ENST00000559886 ARHGEF3Q9NR81 526 aa12.2□□□□□ -0.46
HERC1-205ENST00000559886 POLR3BQ9NW08 1133 aaPredicted RBP12.2□□□□□ -0.46
HERC1-205ENST00000559886 PSMC3IPQ9P2W1 217 aaPredicted RBP12.2□□□□□ -0.46
HERC1-205ENST00000559886 CTNNAL1Q9UBT7 734 aa12.2□□□□□ -0.46
HERC1-205ENST00000559886 WNT16Q9UBV4 365 aa12.2□□□□□ -0.46
HERC1-205ENST00000559886 B4GALT6Q9UBX8 382 aa12.2□□□□□ -0.46
HERC1-205ENST00000559886 CA14Q9ULX7 337 aa12.2□□□□□ -0.46
HERC1-205ENST00000559886 LRRK1Q38SD2 2015 aa12.2□□□□□ -0.46
HERC1-205ENST00000559886 GOLGA8KD6RF30 607 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 GOLGA8TH3BQL2 631 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 CCL22O00626 93 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 UGT1A9O60656 530 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 CLDN7O95471 211 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 SLC4A1P02730 911 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 INHBAP08476 426 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 LHCGRP22888 699 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 PRAMEP78395 509 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 TMPRSS15P98073 1019 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 SATB1Q01826 763 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 STARD3Q14849 445 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 SMAD1Q15797 465 aaKnown RBP12.19□□□□□ -0.46
HERC1-205ENST00000559886 HSP90B2PQ58FF3 399 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 LRRC73Q5JTD7 316 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 FAM46CQ5VWP2 391 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 AGAP2Q99490 1192 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 CENPHQ9H3R5 247 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 MFSD1Q9H3U5 465 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 FBRSQ9HAH7 460 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 UGT1A7Q9HAW7 530 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 UGT1A10Q9HAW8 530 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 UGT1A8Q9HAW9 530 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 IARS2Q9NSE4 1012 aaKnown RBP12.19□□□□□ -0.46
HERC1-205ENST00000559886 GGT7Q9UJ14 662 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 ZNF180Q9UJW8 692 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 NDRG2Q9UN36 371 aaKnown RBP12.19□□□□□ -0.46
HERC1-205ENST00000559886 PKP3Q9Y446 797 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 IKBKGQ9Y6K9 419 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 A0A1W2PQF6 199 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 A8MX80 341 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 RGS16O15492 202 aaPredicted RBP12.19□□□□□ -0.46
HERC1-205ENST00000559886 RNASEH1O60930 286 aaKnown RBP12.19□□□□□ -0.46
HERC1-205ENST00000559886 CYP2A6P11509 494 aaPredicted RBP12.19□□□□□ -0.46
HERC1-205ENST00000559886 HOXB2P14652 356 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 XPAP23025 273 aaPredicted RBP12.19□□□□□ -0.46
HERC1-205ENST00000559886 HADHAP40939 763 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 PSMD8P48556 350 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 SUOXP51687 545 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 SEMG2Q02383 582 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 TNFAIP8L3Q5GJ75 292 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 LRRC66Q68CR7 880 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 KIAA1211LQ6NV74 962 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 NEPROQ6NW34 567 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 ZNF687Q8N1G0 1237 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 OR6P1Q8NGX9 317 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 OR2T3Q8NH03 318 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 ERLEC1Q96DZ1 483 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 SUDS3Q9H7L9 328 aaPredicted RBP12.19□□□□□ -0.46
HERC1-205ENST00000559886 CD248Q9HCU0 757 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 SLC17A6Q9P2U8 582 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 PSAT1Q9Y617 370 aa12.19□□□□□ -0.46
HERC1-205ENST00000559886 CCDC162PA2VCL2 907 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 H3BQF6 201 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 H7C0S8 307 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 FAM155BO75949 473 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 ZNF30P17039 623 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 VIPR1P32241 457 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 COPAP53621 1224 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 PTSQ03393 145 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 THOC5Q13769 683 aaKnown RBP12.18□□□□□ -0.46
HERC1-205ENST00000559886 CST6Q15828 149 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 TTMPQ5BVD1 217 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 AGBL2Q5U5Z8 902 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 FBXL19Q6PCT2 694 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 MTERF4Q7Z6M4 381 aaKnown RBP12.18□□□□□ -0.46
HERC1-205ENST00000559886 CYP4X1Q8N118 509 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 RPLP0P6Q8NHW5 317 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 CALML6Q8TD86 181 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 ATXN2LQ8WWM7 1075 aaKnown RBP12.18□□□□□ -0.46
HERC1-205ENST00000559886 SGSM3Q96HU1 749 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 CPNE1Q99829 537 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 FAM167BQ9BTA0 163 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 HDAC8Q9BY41 377 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 BPIFA1Q9NP55 256 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 DYRK4Q9NR20 520 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 NSMCE4AQ9NXX6 385 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 TBK1Q9UHD2 729 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 KRBA1A5PL33 1030 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 ADH1BP00325 375 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 GOT2P00505 430 aaKnown RBP12.18□□□□□ -0.46
HERC1-205ENST00000559886 CHRNB1P11230 501 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 ADRB3P13945 408 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 MMP12P39900 470 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 STARD6P59095 220 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 EOGTQ5NDL2 527 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 ERAP2Q6P179 960 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 MICALCLQ6ZW33 695 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 ERN2Q76MJ5 926 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms