RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 GSCP56915 257 aaPredicted RBP5.85□□□□□ -1.47
USP3-215ENST00000559771 SNRPD1P62314 119 aaKnown RBP5.85□□□□□ -1.47
USP3-215ENST00000559771 YPEL5P62699 121 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 RHDQ02161 417 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 OGDHQ02218 1023 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 SRSF6Q13247 344 aaKnown RBP5.85□□□□□ -1.47
USP3-215ENST00000559771 SGCGQ13326 291 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 SERINC3Q13530 473 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 POLD3Q15054 466 aaPredicted RBP5.85□□□□□ -1.47
USP3-215ENST00000559771 IRF4Q15306 451 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 NR0B2Q15466 257 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 MSMPQ1L6U9 139 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 ALG11Q2TAA5 492 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 WSCD2Q2TBF2 565 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 TMEM52BQ4KMG9 183 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 TCP11X2Q5H9J9 407 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 CDKAL1Q5VV42 579 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 KIAA1614Q5VZ46 1190 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 RWDD4Q6NW29 188 aaKnown RBP5.85□□□□□ -1.47
USP3-215ENST00000559771 INO80CQ6PI98 192 aaPredicted RBP5.85□□□□□ -1.47
USP3-215ENST00000559771 WDR59Q6PJI9 974 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 SASS6Q6UVJ0 657 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 MACC1Q6ZN28 852 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 RBM44Q6ZP01 1051 aaKnown RBP5.85□□□□□ -1.47
USP3-215ENST00000559771 STRADAQ7RTN6 431 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 ZNF605Q86T29 641 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 TTC7BQ86TV6 843 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 ZNF677Q86XU0 584 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 RYBPQ8N488 228 aaPredicted RBP5.85□□□□□ -1.47
USP3-215ENST00000559771 KYQ8NBH2 561 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 FAM172AQ8WUF8 416 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 NTAN1Q96AB6 310 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 TBC1D31Q96DN5 1066 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 HMCESQ96FZ2 354 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 TBATAQ96M53 351 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 IL12RB2Q99665 862 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 CCDC3Q9BQI4 270 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 C11orf70Q9BRQ4 267 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 WRAP53Q9BUR4 548 aaKnown RBP5.85□□□□□ -1.47
USP3-215ENST00000559771 OSBPL1AQ9BXW6 950 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 TTYH3Q9C0H2 523 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 NAT10Q9H0A0 1025 aaKnown RBP5.85□□□□□ -1.47
USP3-215ENST00000559771 ABCG4Q9H172 646 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 PDCL3Q9H2J4 239 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 RETREG1Q9H6L5 497 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 PDFQ9HBH1 243 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 THSD1Q9NS62 852 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 TMEM51Q9NW97 253 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 TAB2Q9NYJ8 693 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 SPASTQ9UBP0 616 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 DKK3Q9UBP4 350 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 APOBEC3BQ9UH17 382 aaKnown RBP5.85□□□□□ -1.47
USP3-215ENST00000559771 PADI4Q9UM07 663 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 SIK3Q9Y2K2 1263 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 COQ6Q9Y2Z9 468 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 MYO18BQ8IUG5 2567 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 UBR5O95071 2799 aaPredicted RBP5.84□□□□□ -1.47
USP3-215ENST00000559771 PIEZO2Q9H5I5 2752 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 WASH4PA8MWX3 477 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 RASA4BC9J798 803 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 J3KR12 359 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 NEMP1O14524 444 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 CCP110O43303 1012 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 RASA4O43374 803 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 BUB1O43683 1085 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 TCEA3O75764 348 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 TM7SF2O76062 418 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 PIGNO95427 931 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 PRKCGP05129 697 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 PTMAP06454 111 aaKnown RBP5.84□□□□□ -1.47
USP3-215ENST00000559771 HGFP14210 728 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 GLB1P16278 677 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 EEF1GP26641 437 aaKnown RBP5.84□□□□□ -1.47
USP3-215ENST00000559771 SDC4P31431 198 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 SOX5P35711 763 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 ETFBP38117 255 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 HK3P52790 923 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 THOP1P52888 689 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 UCNP55089 124 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 GEMIN4P57678 1058 aaKnown RBP5.84□□□□□ -1.47
USP3-215ENST00000559771 POLR2FP61218 127 aaKnown RBP5.84□□□□□ -1.47
USP3-215ENST00000559771 RPL7AP62424 266 aaKnown RBP5.84□□□□□ -1.47
USP3-215ENST00000559771 CCL7P80098 99 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 TYRO3Q06418 890 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 RALGDSQ12967 914 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 INPP5AQ14642 412 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 KRT31Q15323 416 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 TCEA2Q15560 299 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 TGIF1Q15583 401 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 CLEC16AQ2KHT3 1053 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 ARL13BQ3SXY8 428 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 LINC00303Q3SY05 128 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 INO80DQ53TQ3 878 aaPredicted RBP5.84□□□□□ -1.47
USP3-215ENST00000559771 CYP4V2Q6ZWL3 525 aaPredicted RBP5.84□□□□□ -1.47
USP3-215ENST00000559771 MON1BQ7L1V2 547 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 APTXQ7Z2E3 356 aaKnown RBP5.84□□□□□ -1.47
USP3-215ENST00000559771 TMPRSS9Q7Z410 1059 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 PHF13Q86YI8 300 aaPredicted RBP5.84□□□□□ -1.47
USP3-215ENST00000559771 FAM114A1Q8IWE2 563 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 UMODL1-AS1Q8N2C9 162 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms