RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 OR56A4Q8NGH8 313 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 ARRDC2Q8TBH0 407 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 PIH1D2Q8WWB5 315 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 SCG3Q8WXD2 468 aaKnown RBP8.2□□□□□ -1.1
SNX1-207ENST00000559401 P3H4Q92791 437 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 FATE1Q969F0 183 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 FUBP1Q96AE4 644 aaKnown RBP8.2□□□□□ -1.1
SNX1-207ENST00000559401 PDXPQ96GD0 296 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 COQ10AQ96MF6 247 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 AGAP3Q96P47 875 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 SMIM14Q96QK8 99 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 BAG1Q99933 345 aaPredicted RBP8.2□□□□□ -1.1
SNX1-207ENST00000559401 TDRD1Q9BXT4 1180 aaKnown RBP8.2□□□□□ -1.1
SNX1-207ENST00000559401 ABCG4Q9H172 646 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 PCDH9Q9HC56 1237 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 CYP4F12Q9HCS2 524 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 PHPT1Q9NRX4 125 aaPredicted RBP8.2□□□□□ -1.1
SNX1-207ENST00000559401 SIRPGQ9P1W8 387 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 GULP1Q9UBP9 304 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 CD84Q9UIB8 345 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 ZMIZ1Q9ULJ6 1067 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 PNMA8BQ9ULN7 279 aaPredicted RBP8.2□□□□□ -1.1
SNX1-207ENST00000559401 CSNK1G3Q9Y6M4 447 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 ARID1BQ8NFD5 2236 aaPredicted RBP8.19□□□□□ -1.1
SNX1-207ENST00000559401 MYLKQ15746 1914 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 A0A0J9YYE9 177 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 C1orf232A0A0U1RR37 186 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 FAM221BA6H8Z2 402 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 RCCD1A6NED2 376 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 TMEM202A6NGA9 273 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 PSMD11O00231 422 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 PDE2AO00408 941 aaPredicted RBP8.19□□□□□ -1.1
SNX1-207ENST00000559401 FZD6O60353 706 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 GCATO75600 419 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 DKK1O94907 266 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 TRBC1P01850 177 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 PTMAP06454 111 aaKnown RBP8.19□□□□□ -1.1
SNX1-207ENST00000559401 CELA2BP08218 269 aaPredicted RBP8.19□□□□□ -1.1
SNX1-207ENST00000559401 GIMD1P0DJR0 217 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 CKMT1AP12532 417 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 PECAM1P16284 738 aaPredicted RBP8.19□□□□□ -1.1
SNX1-207ENST00000559401 GM2AP17900 193 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 TGM2P21980 687 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 FECHP22830 423 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 CDC25BP30305 580 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 TNNT3P45378 269 aaPredicted RBP8.19□□□□□ -1.1
SNX1-207ENST00000559401 GPR1P46091 355 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 RPIAP49247 311 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 VAV2P52735 878 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 GALNT3Q14435 633 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 NR0B2Q15466 257 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 SMAD1Q15797 465 aaKnown RBP8.19□□□□□ -1.1
SNX1-207ENST00000559401 TFDP3Q5H9I0 405 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 ALG1LQ6GMV1 187 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 ESRP1Q6NXG1 681 aaKnown RBP8.19□□□□□ -1.1
SNX1-207ENST00000559401 PNCKQ6P2M8 343 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 DOK6Q6PKX4 331 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 CRTC1Q6UUV9 634 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 NYAP1Q6ZVC0 841 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 EFL1Q7Z2Z2 1120 aaKnown RBP8.19□□□□□ -1.1
SNX1-207ENST00000559401 ZC3H18Q86VM9 953 aaKnown RBP8.19□□□□□ -1.1
SNX1-207ENST00000559401 TMPRSS12Q86WS5 348 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 HEATR4Q86WZ0 1026 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 GKN2Q86XP6 184 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 KATNAL2Q8IYT4 538 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 RCOR2Q8IZ40 523 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 PELI3Q8N2H9 469 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 TXLNBQ8N3L3 684 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 EXD1Q8NHP7 514 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 IFI44Q8TCB0 444 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 KIAA1524Q8TCG1 905 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 MAPK15Q8TD08 544 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 TFB1MQ8WVM0 346 aaKnown RBP8.19□□□□□ -1.1
SNX1-207ENST00000559401 SPOCK2Q92563 424 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 KRT35Q92764 455 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 AP2M1Q96CW1 435 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 DTD2Q96FN9 168 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 OLFM3Q96PB7 478 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 MCCC1Q96RQ3 725 aaPredicted RBP8.19□□□□□ -1.1
SNX1-207ENST00000559401 RBM15Q96T37 977 aaKnown RBP eCLIP8.19□□□□□ -1.1
SNX1-207ENST00000559401 DESI2Q9BSY9 194 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 HEMGNQ9BXL5 484 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 TMEM121BQ9BXQ6 578 aaPredicted RBP8.19□□□□□ -1.1
SNX1-207ENST00000559401 ADGRE3Q9BY15 652 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 BRD8Q9H0E9 1235 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 CCDC86Q9H6F5 360 aaKnown RBP8.19□□□□□ -1.1
SNX1-207ENST00000559401 FGF22Q9HCT0 170 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 MRPL40Q9NQ50 206 aaKnown RBP8.19□□□□□ -1.1
SNX1-207ENST00000559401 KCTD5Q9NXV2 234 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 NCKIPSDQ9NZQ3 722 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 IMPACTQ9P2X3 320 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 SAE1Q9UBE0 346 aaPredicted RBP8.19□□□□□ -1.1
SNX1-207ENST00000559401 SALL4Q9UJQ4 1053 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 DNPEPQ9ULA0 475 aa8.19□□□□□ -1.1
SNX1-207ENST00000559401 GOLGA4Q13439 2230 aaKnown RBP8.18□□□□□ -1.1
SNX1-207ENST00000559401 IGF2RP11717 2491 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 hCG_1818297A0A087WSY0 165 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 PRSS38A1L453 326 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 TRABD2BA6NFA1 517 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 LMO7DNF2Z398 122 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms