RNA–Protein interactions for RNA: ENST00000559179.1

TRPM1-210, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best) BASIC

Gene TRPM1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-210ENST00000559179 HGSO14964 777 aaPredicted RBP12.35□□□□□ -0.43
TRPM1-210ENST00000559179 FGF1P05230 155 aa12.35□□□□□ -0.43
TRPM1-210ENST00000559179 HOXC4P09017 264 aaPredicted RBP12.35□□□□□ -0.43
TRPM1-210ENST00000559179 MYCLP1P12525 358 aaPredicted RBP12.35□□□□□ -0.43
TRPM1-210ENST00000559179 WT1P19544 449 aaPredicted RBP12.35□□□□□ -0.43
TRPM1-210ENST00000559179 PSMA2P25787 234 aa12.35□□□□□ -0.43
TRPM1-210ENST00000559179 AK4P27144 223 aaPredicted RBP12.35□□□□□ -0.43
TRPM1-210ENST00000559179 HTR7P34969 479 aa12.35□□□□□ -0.43
TRPM1-210ENST00000559179 RGRP47804 291 aa12.35□□□□□ -0.43
TRPM1-210ENST00000559179 CSNK1DP48730 415 aa12.35□□□□□ -0.43
TRPM1-210ENST00000559179 RPL7AP62424 266 aaKnown RBP12.35□□□□□ -0.43
TRPM1-210ENST00000559179 RALGDSQ12967 914 aa12.35□□□□□ -0.43
TRPM1-210ENST00000559179 PTP4A2Q12974 167 aa12.35□□□□□ -0.43
TRPM1-210ENST00000559179 ZNF235Q14590 738 aa12.35□□□□□ -0.43
TRPM1-210ENST00000559179 CLCA4Q14CN2 919 aa12.35□□□□□ -0.43
TRPM1-210ENST00000559179 PPP6R3Q5H9R7 873 aaPredicted RBP12.35□□□□□ -0.43
TRPM1-210ENST00000559179 SNAP47Q5SQN1 464 aa12.35□□□□□ -0.43
TRPM1-210ENST00000559179 NKAIN2Q5VXU1 208 aa12.35□□□□□ -0.43
TRPM1-210ENST00000559179 AFMIDQ63HM1 303 aa12.35□□□□□ -0.43
TRPM1-210ENST00000559179 RAET1GQ6H3X3 334 aa12.35□□□□□ -0.43
TRPM1-210ENST00000559179 HEATR4Q86WZ0 1026 aa12.35□□□□□ -0.43
TRPM1-210ENST00000559179 DTX1Q86Y01 620 aa12.35□□□□□ -0.43
TRPM1-210ENST00000559179 AGBL5Q8NDL9 886 aa12.35□□□□□ -0.43
TRPM1-210ENST00000559179 ART4Q93070 314 aa12.35□□□□□ -0.43
TRPM1-210ENST00000559179 NKD1Q969G9 470 aa12.35□□□□□ -0.43
TRPM1-210ENST00000559179 KIAA1143Q96AT1 154 aaPredicted RBP12.35□□□□□ -0.43
TRPM1-210ENST00000559179 AGPAT1Q99943 283 aa12.35□□□□□ -0.43
TRPM1-210ENST00000559179 NUP62CLQ9H1M0 184 aa12.35□□□□□ -0.43
TRPM1-210ENST00000559179 LRRC19Q9H756 370 aa12.35□□□□□ -0.43
TRPM1-210ENST00000559179 PDFQ9HBH1 243 aa12.35□□□□□ -0.43
TRPM1-210ENST00000559179 KCNK4Q9NYG8 393 aa12.35□□□□□ -0.43
TRPM1-210ENST00000559179 B4GALT6Q9UBX8 382 aa12.35□□□□□ -0.43
TRPM1-210ENST00000559179 TRBV23OR9-2A0A075B6M9 112 aa12.34□□□□□ -0.43
TRPM1-210ENST00000559179 IGHV5-10-1A0A0J9YXX1 117 aa12.34□□□□□ -0.43
TRPM1-210ENST00000559179 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.34□□□□□ -0.43
TRPM1-210ENST00000559179 TTC24A2A3L6 582 aaPredicted RBP12.34□□□□□ -0.43
TRPM1-210ENST00000559179 A8MU76 341 aa12.34□□□□□ -0.43
TRPM1-210ENST00000559179 TMCO5BA8MYB1 307 aa12.34□□□□□ -0.43
TRPM1-210ENST00000559179 RNF8O76064 485 aa12.34□□□□□ -0.43
TRPM1-210ENST00000559179 CCDC172P0C7W6 258 aa12.34□□□□□ -0.43
TRPM1-210ENST00000559179 FGF3P11487 239 aaPredicted RBP12.34□□□□□ -0.43
TRPM1-210ENST00000559179 CYP2A6P11509 494 aaPredicted RBP12.34□□□□□ -0.43
TRPM1-210ENST00000559179 TNFAIP3P21580 790 aa12.34□□□□□ -0.43
TRPM1-210ENST00000559179 TRIM23P36406 574 aa12.34□□□□□ -0.43
TRPM1-210ENST00000559179 JAM2P57087 298 aa12.34□□□□□ -0.43
TRPM1-210ENST00000559179 AP1S1P61966 158 aa12.34□□□□□ -0.43
TRPM1-210ENST00000559179 IL10RBQ08334 325 aa12.34□□□□□ -0.43
TRPM1-210ENST00000559179 NSUN2Q08J23 767 aaKnown RBP eCLIP12.34□□□□□ -0.43
TRPM1-210ENST00000559179 KCNAB2Q13303 367 aa12.34□□□□□ -0.43
TRPM1-210ENST00000559179 RFTN1Q14699 578 aaPredicted RBP12.34□□□□□ -0.43
TRPM1-210ENST00000559179 CLPPQ16740 277 aaPredicted RBP12.34□□□□□ -0.43
TRPM1-210ENST00000559179 DCAF12Q5T6F0 453 aa12.34□□□□□ -0.43
TRPM1-210ENST00000559179 KDELC2Q7Z4H8 507 aa12.34□□□□□ -0.43
TRPM1-210ENST00000559179 CACNA2D3Q8IZS8 1091 aa12.34□□□□□ -0.43
TRPM1-210ENST00000559179 BBS5Q8N3I7 341 aa12.34□□□□□ -0.43
TRPM1-210ENST00000559179 GPBAR1Q8TDU6 330 aa12.34□□□□□ -0.43
TRPM1-210ENST00000559179 NSMCE1Q8WV22 266 aa12.34□□□□□ -0.43
TRPM1-210ENST00000559179 HTR3CQ8WXA8 447 aa12.34□□□□□ -0.43
TRPM1-210ENST00000559179 ASPSCR1Q9BZE9 553 aa12.34□□□□□ -0.43
TRPM1-210ENST00000559179 B3GNT4Q9C0J1 378 aa12.34□□□□□ -0.43
TRPM1-210ENST00000559179 ADNPQ9H2P0 1102 aa12.34□□□□□ -0.43
TRPM1-210ENST00000559179 KCTD5Q9NXV2 234 aa12.34□□□□□ -0.43
TRPM1-210ENST00000559179 SUFUQ9UMX1 484 aa12.34□□□□□ -0.43
TRPM1-210ENST00000559179 MYO18BQ8IUG5 2567 aa12.34□□□□□ -0.43
TRPM1-210ENST00000559179 A0A1W2PQ67 120 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 EFCAB7A8K855 629 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 ZNF891A8MT65 544 aaPredicted RBP12.33□□□□□ -0.44
TRPM1-210ENST00000559179 EPHB6O15197 1021 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 PRPSAP2O60256 369 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 CPP00450 1065 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 PRKAR1AP10644 381 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 LIFP15018 202 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 ERCC2P18074 760 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 CDK11BP21127 795 aaKnown RBP12.33□□□□□ -0.44
TRPM1-210ENST00000559179 CD1CP29017 333 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 VIPR1P32241 457 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 ACTR1BP42025 376 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 GPR3P46089 330 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 GPR1P46091 355 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 POLD2P49005 469 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 LIMK2P53671 638 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 POLE2P56282 527 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 GSCP56915 257 aaPredicted RBP12.33□□□□□ -0.44
TRPM1-210ENST00000559179 ACTR1AP61163 376 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 TRA2AQ13595 282 aaKnown RBP eCLIP12.33□□□□□ -0.44
TRPM1-210ENST00000559179 LBRQ14739 615 aaKnown RBP12.33□□□□□ -0.44
TRPM1-210ENST00000559179 KRT31Q15323 416 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 SKIDA1Q1XH10 827 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 ERMARDQ5T6L9 678 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 ACAD10Q6JQN1 1059 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 RFX8Q6ZV50 586 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 MON1BQ7L1V2 547 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 NDUFAF2Q8N183 169 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 ZNF564Q8TBZ8 553 aaPredicted RBP12.33□□□□□ -0.44
TRPM1-210ENST00000559179 PATE1Q8WXA2 126 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 SLC38A3Q99624 504 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 FUCA2Q9BTY2 467 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 SLC12A9Q9BXP2 914 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 CDH19Q9H159 772 aa12.33□□□□□ -0.44
TRPM1-210ENST00000559179 TRNAU1APQ9NX07 287 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms