RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 ABCG8Q9H221 673 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 MRPL40Q9NQ50 206 aaKnown RBP12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 AMACRQ9UHK6 382 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 CD84Q9UIB8 345 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 TMPRSS11EQ9UL52 423 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 GUCA1BQ9UMX6 200 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 EFR3BQ9Y2G0 817 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 LOC285095A0A1B0GVY8 99 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 CCDC66A2RUB6 948 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 ANKRD66B4E2M5 251 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 APOC4-APOC2K7ER74 178 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 MAGEC1O60732 1142 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 APOC2P02655 101 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 PCCBP05166 539 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 NME1P15531 152 aaKnown RBP12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 ZFXP17010 805 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 STC1P52823 247 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 RWDD2BP57060 319 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 COPS2P61201 443 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 SGCGQ13326 291 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 TFDP2Q14188 446 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 LRRC14Q15048 493 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 ALG11Q2TAA5 492 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 MEI1Q5TIA1 1274 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 KDELC2Q7Z4H8 507 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 RAB44Q7Z6P3 723 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 PRUNE1Q86TP1 453 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 KLHDC8BQ8IXV7 354 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 CCL4L1Q8NHW4 92 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 TFB1MQ8WVM0 346 aaKnown RBP12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 OR1E3Q8WZA6 343 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 TSACCQ96A04 125 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 LRRC61Q9BV99 259 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 TLR10Q9BXR5 811 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 SLC25A51Q9H1U9 297 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 PCDH9Q9HC56 1237 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 FGF22Q9HCT0 170 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 SEPT10Q9P0V9 454 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 AMFRQ9UKV5 643 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 TTLL3Q9Y4R7 772 aa12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 ZNF106Q9H2Y7 1883 aaKnown RBP12.65□□□□□ -0.38
RABGGTA-207ENST00000558936 DMXL2Q8TDJ6 3036 aa12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 CAPN8A6NHC0 703 aa12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 FPGTO14772 594 aa12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 FANCGO15287 622 aa12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 SIGLEC6O43699 453 aa12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 HYAL3O43820 417 aaPredicted RBP12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 FTH1P19P0C7X4 201 aa12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 GRK6P43250 576 aa12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 RABIFP47224 123 aa12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 NAP1L1P55209 391 aaKnown RBP12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 SHC2P98077 582 aa12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 C1orf61Q13536 156 aa12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 DENND2CQ68D51 928 aa12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 ESRP1Q6NXG1 681 aaKnown RBP12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 PNCKQ6P2M8 343 aa12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 PEX26Q7Z412 305 aa12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 CCDC50Q8IVM0 306 aa12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 CHCHD4Q8N4Q1 142 aa12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 RNF10Q8N5U6 811 aaKnown RBP12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 GLIS1Q8NBF1 620 aa12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 ZNF548Q8NEK5 533 aaPredicted RBP12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 LPCAT1Q8NF37 534 aa12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 SLC35B2Q8TB61 432 aa12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 FAM174AQ8TBP5 190 aa12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 HTR3CQ8WXA8 447 aa12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 P3H4Q92791 437 aa12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 PDXPQ96GD0 296 aa12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 RBM41Q96IZ5 413 aaKnown RBP12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 KLK13Q9UKR3 277 aa12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 PPP2R2CQ9Y2T4 447 aa12.64□□□□□ -0.39
RABGGTA-207ENST00000558936 USP27XA6NNY8 438 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 FADS2P1A8MWK0 482 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 PPP1R12AO14974 1030 aaPredicted RBP12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 YKT6O15498 198 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 LZTS3O60299 673 aaPredicted RBP12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 CEACAM5P06731 702 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 ITGAVP06756 1048 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 ELFN1P0C7U0 828 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 XPAP23025 273 aaPredicted RBP12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 ADRA1AP35348 466 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 POLD2P49005 469 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 ARRB1P49407 418 aaPredicted RBP12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 ACADVLP49748 655 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 YPEL5P62699 121 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 POLR2LP62875 67 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 FOXC1Q12948 553 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 XRCC4Q13426 336 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 PTPRCAPQ14761 206 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 ACOX1Q15067 660 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 TCEA2Q15560 299 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 DENND5AQ6IQ26 1287 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 ERAP2Q6P179 960 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 MACC1Q6ZN28 852 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 LYSMD3Q7Z3D4 306 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 NRROSQ86YC3 692 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 OXR1Q8N573 874 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 CCDC110Q8TBZ0 833 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 NSMCE1Q8WV22 266 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms