RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 UGT8Q16880 541 aa12.5□□□□□ -0.41
PSEN1-220ENST00000557037 EFHC1Q5JVL4 640 aa12.5□□□□□ -0.41
PSEN1-220ENST00000557037 TCERG1LQ5VWI1 586 aa12.5□□□□□ -0.41
PSEN1-220ENST00000557037 WDR74Q6RFH5 385 aaPredicted RBP12.5□□□□□ -0.41
PSEN1-220ENST00000557037 SHC4Q6S5L8 630 aa12.5□□□□□ -0.41
PSEN1-220ENST00000557037 ZNF783Q6ZMS7 281 aa12.5□□□□□ -0.41
PSEN1-220ENST00000557037 RASGRP3Q8IV61 690 aa12.5□□□□□ -0.41
PSEN1-220ENST00000557037 PELI3Q8N2H9 469 aa12.5□□□□□ -0.41
PSEN1-220ENST00000557037 THAP4Q8WY91 577 aa12.5□□□□□ -0.41
PSEN1-220ENST00000557037 PIGVQ9NUD9 493 aa12.5□□□□□ -0.41
PSEN1-220ENST00000557037 ZNF212Q9UDV6 495 aa12.5□□□□□ -0.41
PSEN1-220ENST00000557037 SERTAD1Q9UHV2 236 aa12.5□□□□□ -0.41
PSEN1-220ENST00000557037 PADI1Q9ULC6 663 aa12.5□□□□□ -0.41
PSEN1-220ENST00000557037 MAPK8IP1Q9UQF2 711 aa12.5□□□□□ -0.41
PSEN1-220ENST00000557037 NTNG1Q9Y2I2 539 aa12.5□□□□□ -0.41
PSEN1-220ENST00000557037 PCDHGB7Q9Y5F8 929 aa12.5□□□□□ -0.41
PSEN1-220ENST00000557037 COPG1Q9Y678 874 aaKnown RBP12.5□□□□□ -0.41
PSEN1-220ENST00000557037 MORC2Q9Y6X9 1032 aaPredicted RBP12.5□□□□□ -0.41
PSEN1-220ENST00000557037 DOCK4Q8N1I0 1966 aa12.49□□□□□ -0.41
PSEN1-220ENST00000557037 ZNF185O15231 689 aa12.49□□□□□ -0.41
PSEN1-220ENST00000557037 CEACAM4O75871 244 aa12.49□□□□□ -0.41
PSEN1-220ENST00000557037 RECQL5O94762 991 aaPredicted RBP12.49□□□□□ -0.41
PSEN1-220ENST00000557037 PIGNO95427 931 aa12.49□□□□□ -0.41
PSEN1-220ENST00000557037 COX6B1P14854 86 aa12.49□□□□□ -0.41
PSEN1-220ENST00000557037 TBXAS1P24557 533 aaPredicted RBP12.49□□□□□ -0.41
PSEN1-220ENST00000557037 RPL13P26373 211 aaKnown RBP12.49□□□□□ -0.41
PSEN1-220ENST00000557037 GARSP41250 739 aaKnown RBP12.49□□□□□ -0.41
PSEN1-220ENST00000557037 SH3BP2P78314 561 aa12.49□□□□□ -0.41
PSEN1-220ENST00000557037 MTA1Q13330 715 aa12.49□□□□□ -0.41
PSEN1-220ENST00000557037 DCAF17Q5H9S7 520 aaPredicted RBP12.49□□□□□ -0.41
PSEN1-220ENST00000557037 TMEM110Q86TL2 294 aa12.49□□□□□ -0.41
PSEN1-220ENST00000557037 CDH24Q86UP0 819 aa12.49□□□□□ -0.41
PSEN1-220ENST00000557037 GUF1Q8N442 669 aaKnown RBP12.49□□□□□ -0.41
PSEN1-220ENST00000557037 GDAP1L1Q96MZ0 367 aa12.49□□□□□ -0.41
PSEN1-220ENST00000557037 TRIM8Q9BZR9 551 aa12.49□□□□□ -0.41
PSEN1-220ENST00000557037 WDR26Q9H7D7 661 aa12.49□□□□□ -0.41
PSEN1-220ENST00000557037 SUFUQ9UMX1 484 aa12.49□□□□□ -0.41
PSEN1-220ENST00000557037 PRICKLE3O43900 615 aaPredicted RBP12.48□□□□□ -0.41
PSEN1-220ENST00000557037 BUB1BO60566 1050 aaPredicted RBP12.48□□□□□ -0.41
PSEN1-220ENST00000557037 RHOBTB3O94955 611 aa12.48□□□□□ -0.41
PSEN1-220ENST00000557037 HOXC4P09017 264 aaPredicted RBP12.48□□□□□ -0.41
PSEN1-220ENST00000557037 TFE3P19532 575 aaPredicted RBP12.48□□□□□ -0.41
PSEN1-220ENST00000557037 ACTR1BP42025 376 aa12.48□□□□□ -0.41
PSEN1-220ENST00000557037 ACTR1AP61163 376 aa12.48□□□□□ -0.41
PSEN1-220ENST00000557037 RAD51Q06609 339 aa12.48□□□□□ -0.41
PSEN1-220ENST00000557037 NFATC2Q13469 925 aa12.48□□□□□ -0.41
PSEN1-220ENST00000557037 AGERQ15109 404 aa12.48□□□□□ -0.41
PSEN1-220ENST00000557037 NFIL3Q16649 462 aa12.48□□□□□ -0.41
PSEN1-220ENST00000557037 ARTNQ5T4W7 220 aa12.48□□□□□ -0.41
PSEN1-220ENST00000557037 OTUD1Q5VV17 481 aaPredicted RBP12.48□□□□□ -0.41
PSEN1-220ENST00000557037 ERAP2Q6P179 960 aa12.48□□□□□ -0.41
PSEN1-220ENST00000557037 FJX1Q86VR8 437 aa12.48□□□□□ -0.41
PSEN1-220ENST00000557037 ST6GALNAC3Q8NDV1 305 aa12.48□□□□□ -0.41
PSEN1-220ENST00000557037 OR6C1Q96RD1 312 aa12.48□□□□□ -0.41
PSEN1-220ENST00000557037 WDCPQ9H6R7 721 aa12.48□□□□□ -0.41
PSEN1-220ENST00000557037 AKIRIN1Q9H9L7 192 aaPredicted RBP12.48□□□□□ -0.41
PSEN1-220ENST00000557037 LHX9Q9NQ69 397 aa12.48□□□□□ -0.41
PSEN1-220ENST00000557037 TRNAU1APQ9NX07 287 aaKnown RBP12.48□□□□□ -0.41
PSEN1-220ENST00000557037 ARHGEF38Q9NXL2 777 aa12.48□□□□□ -0.41
PSEN1-220ENST00000557037 G3BP2Q9UN86 482 aaKnown RBP12.48□□□□□ -0.41
PSEN1-220ENST00000557037 COQ4Q9Y3A0 265 aa12.48□□□□□ -0.41
PSEN1-220ENST00000557037 CNTRLQ7Z7A1 2325 aa12.47□□□□□ -0.41
PSEN1-220ENST00000557037 IGLV3-10A0A075B6K4 115 aa12.47□□□□□ -0.41
PSEN1-220ENST00000557037 HSF2BPO75031 334 aa12.47□□□□□ -0.41
PSEN1-220ENST00000557037 CEACAM5P06731 702 aa12.47□□□□□ -0.41
PSEN1-220ENST00000557037 DRD2P14416 443 aa12.47□□□□□ -0.41
PSEN1-220ENST00000557037 TRIM23P36406 574 aa12.47□□□□□ -0.41
PSEN1-220ENST00000557037 MMP12P39900 470 aa12.47□□□□□ -0.41
PSEN1-220ENST00000557037 ADCY8P40145 1251 aa12.47□□□□□ -0.41
PSEN1-220ENST00000557037 POLD2P49005 469 aa12.47□□□□□ -0.41
PSEN1-220ENST00000557037 SEPHS1P49903 392 aa12.47□□□□□ -0.41
PSEN1-220ENST00000557037 SUOXP51687 545 aa12.47□□□□□ -0.41
PSEN1-220ENST00000557037 HDAC4P56524 1084 aa12.47□□□□□ -0.41
PSEN1-220ENST00000557037 MCCD1P59942 119 aaPredicted RBP12.47□□□□□ -0.41
PSEN1-220ENST00000557037 UGP2Q16851 508 aa12.47□□□□□ -0.41
PSEN1-220ENST00000557037 MIIPQ5JXC2 388 aa12.47□□□□□ -0.41
PSEN1-220ENST00000557037 FAM199XQ6PEV8 388 aaPredicted RBP12.47□□□□□ -0.41
PSEN1-220ENST00000557037 ZNF295-AS1Q8N0V1 137 aa12.47□□□□□ -0.41
PSEN1-220ENST00000557037 GLIS1Q8NBF1 620 aa12.47□□□□□ -0.41
PSEN1-220ENST00000557037 LINC00301Q8NCQ3 95 aa12.47□□□□□ -0.41
PSEN1-220ENST00000557037 SLC37A2Q8TED4 501 aa12.47□□□□□ -0.41
PSEN1-220ENST00000557037 STK32AQ8WU08 396 aa12.47□□□□□ -0.41
PSEN1-220ENST00000557037 UBE2Q2Q8WVN8 375 aa12.47□□□□□ -0.41
PSEN1-220ENST00000557037 REPIN1Q9BWE0 567 aaKnown RBP12.47□□□□□ -0.41
PSEN1-220ENST00000557037 C21orf140B9A014 251 aa12.46□□□□□ -0.41
PSEN1-220ENST00000557037 PDE2AO00408 941 aaPredicted RBP12.46□□□□□ -0.41
PSEN1-220ENST00000557037 SPAG6O75602 509 aa12.46□□□□□ -0.41
PSEN1-220ENST00000557037 TMCC1O94876 653 aa12.46□□□□□ -0.41
PSEN1-220ENST00000557037 IGSF6O95976 241 aa12.46□□□□□ -0.41
PSEN1-220ENST00000557037 MYCLP1P12525 358 aaPredicted RBP12.46□□□□□ -0.41
PSEN1-220ENST00000557037 PTPN4P29074 926 aa12.46□□□□□ -0.41
PSEN1-220ENST00000557037 GLRBP48167 497 aa12.46□□□□□ -0.41
PSEN1-220ENST00000557037 CXCR3P49682 368 aa12.46□□□□□ -0.41
PSEN1-220ENST00000557037 PDCLQ13371 301 aa12.46□□□□□ -0.41
PSEN1-220ENST00000557037 ART3Q13508 389 aa12.46□□□□□ -0.41
PSEN1-220ENST00000557037 PNCKQ6P2M8 343 aa12.46□□□□□ -0.41
PSEN1-220ENST00000557037 HPS6Q86YV9 775 aa12.46□□□□□ -0.41
PSEN1-220ENST00000557037 PPM1KQ8N3J5 372 aa12.46□□□□□ -0.41
PSEN1-220ENST00000557037 EXOC2Q96KP1 924 aa12.46□□□□□ -0.41
PSEN1-220ENST00000557037 NCAPGQ9BPX3 1015 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms