RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 WDR75Q8IWA0 830 aaKnown RBP18.33■□□□□ 0.53
SDR39U1-220ENST00000556548 ZNF781Q8N8C0 355 aa18.33■□□□□ 0.53
SDR39U1-220ENST00000556548 PHOSPHO2Q8TCD6 241 aa18.33■□□□□ 0.53
SDR39U1-220ENST00000556548 ZSWIM3Q96MP5 696 aa18.33■□□□□ 0.53
SDR39U1-220ENST00000556548 LINC00597Q9H2U6 94 aa18.33■□□□□ 0.53
SDR39U1-220ENST00000556548 CERS4Q9HA82 394 aa18.33■□□□□ 0.53
SDR39U1-220ENST00000556548 POLR3BQ9NW08 1133 aaPredicted RBP18.33■□□□□ 0.53
SDR39U1-220ENST00000556548 FKBPLQ9UIM3 349 aa18.33■□□□□ 0.53
SDR39U1-220ENST00000556548 DENND4CQ5VZ89 1909 aa18.33■□□□□ 0.52
SDR39U1-220ENST00000556548 UBA6A0AVT1 1052 aaPredicted RBP18.33■□□□□ 0.52
SDR39U1-220ENST00000556548 NEMP2A6NFY4 417 aa18.33■□□□□ 0.52
SDR39U1-220ENST00000556548 NEDD8-MDP1E9PL57 170 aa18.33■□□□□ 0.52
SDR39U1-220ENST00000556548 FCHO1O14526 889 aa18.33■□□□□ 0.52
SDR39U1-220ENST00000556548 DLX3O60479 287 aa18.33■□□□□ 0.52
SDR39U1-220ENST00000556548 CYBBP04839 570 aa18.33■□□□□ 0.52
SDR39U1-220ENST00000556548 APOA4P06727 396 aa18.33■□□□□ 0.52
SDR39U1-220ENST00000556548 CHRNGP07510 517 aa18.33■□□□□ 0.52
SDR39U1-220ENST00000556548 GRIA4P48058 902 aa18.33■□□□□ 0.52
SDR39U1-220ENST00000556548 NAGLUP54802 743 aa18.33■□□□□ 0.52
SDR39U1-220ENST00000556548 CTC1Q2NKJ3 1217 aa18.33■□□□□ 0.52
SDR39U1-220ENST00000556548 PLEKHG6Q3KR16 790 aa18.33■□□□□ 0.52
SDR39U1-220ENST00000556548 OR6Y1Q8NGX8 325 aa18.33■□□□□ 0.52
SDR39U1-220ENST00000556548 FIBINQ8TAL6 211 aa18.33■□□□□ 0.52
SDR39U1-220ENST00000556548 TXLNGQ9NUQ3 528 aa18.33■□□□□ 0.52
SDR39U1-220ENST00000556548 MCM8Q9UJA3 840 aa18.33■□□□□ 0.52
SDR39U1-220ENST00000556548 CHUKO15111 745 aa18.32■□□□□ 0.52
SDR39U1-220ENST00000556548 GPR39O43194 453 aa18.32■□□□□ 0.52
SDR39U1-220ENST00000556548 CLASP2O75122 1294 aaKnown RBP18.32■□□□□ 0.52
SDR39U1-220ENST00000556548 HLA-FP30511 346 aa18.32■□□□□ 0.52
SDR39U1-220ENST00000556548 MAVSQ7Z434 540 aa18.32■□□□□ 0.52
SDR39U1-220ENST00000556548 SDCCAG8Q86SQ7 713 aaPredicted RBP18.32■□□□□ 0.52
SDR39U1-220ENST00000556548 SREK1Q8WXA9 508 aaKnown RBP18.32■□□□□ 0.52
SDR39U1-220ENST00000556548 MYLIPQ8WY64 445 aa18.32■□□□□ 0.52
SDR39U1-220ENST00000556548 TDP1Q9NUW8 608 aa18.32■□□□□ 0.52
SDR39U1-220ENST00000556548 ARL8BQ9NVJ2 186 aa18.32■□□□□ 0.52
SDR39U1-220ENST00000556548 STK38LQ9Y2H1 464 aa18.32■□□□□ 0.52
SDR39U1-220ENST00000556548 A8MX80 341 aa18.32■□□□□ 0.52
SDR39U1-220ENST00000556548 TARM1B6A8C7 271 aa18.32■□□□□ 0.52
SDR39U1-220ENST00000556548 CA3P07451 260 aa18.32■□□□□ 0.52
SDR39U1-220ENST00000556548 LPOP22079 712 aaPredicted RBP18.32■□□□□ 0.52
SDR39U1-220ENST00000556548 ALDH18A1P54886 795 aaKnown RBP18.32■□□□□ 0.52
SDR39U1-220ENST00000556548 DGKKQ5KSL6 1271 aa18.32■□□□□ 0.52
SDR39U1-220ENST00000556548 LIPMQ5VYY2 423 aa18.32■□□□□ 0.52
SDR39U1-220ENST00000556548 ASTLQ6HA08 431 aaPredicted RBP18.32■□□□□ 0.52
SDR39U1-220ENST00000556548 PEX13Q92968 403 aa18.32■□□□□ 0.52
SDR39U1-220ENST00000556548 WWP1Q9H0M0 922 aa18.32■□□□□ 0.52
SDR39U1-220ENST00000556548 NQO1P15559 274 aaKnown RBP18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 FMO4P31512 558 aa18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 STC1P52823 247 aa18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 FAM83EQ2M2I3 478 aa18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 ARHGAP15Q53QZ3 475 aa18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 MPP7Q5T2T1 576 aa18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 ASRGL1Q7L266 308 aa18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 CCNYL1Q8N7R7 359 aa18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 GPR150Q8NGU9 434 aa18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 ACDQ96AP0 544 aa18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 TSPAN17Q96FV3 270 aa18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 MRPL46Q9H2W6 279 aaKnown RBP18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 CYP4F12Q9HCS2 524 aa18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 MYOFQ9NZM1 2061 aa18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 ANKRD36A6QL64 1941 aa18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 STX7O15400 261 aaKnown RBP18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 KRT16P08779 473 aa18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 LTA4HP09960 611 aaKnown RBP18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 MC4RP32245 332 aa18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 SEMG2Q02383 582 aa18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 TSNAXIP1Q2TAA8 658 aa18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 PITRM1Q5JRX3 1037 aa18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 C9orf50Q5SZB4 431 aa18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 ARMC12Q5T9G4 340 aa18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 LMNTD2Q8IXW0 634 aa18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 PIANPQ8IYJ0 282 aa18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 RDH11Q8TC12 318 aa18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 MYO19Q96H55 970 aa18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 MID2Q9UJV3 735 aa18.31■□□□□ 0.52
SDR39U1-220ENST00000556548 FZD6O60353 706 aa18.3■□□□□ 0.52
SDR39U1-220ENST00000556548 ZNF821O75541 412 aaPredicted RBP18.3■□□□□ 0.52
SDR39U1-220ENST00000556548 RASSF9O75901 435 aa18.3■□□□□ 0.52
SDR39U1-220ENST00000556548 MPSTP25325 297 aa18.3■□□□□ 0.52
SDR39U1-220ENST00000556548 PLK1P53350 603 aa18.3■□□□□ 0.52
SDR39U1-220ENST00000556548 EPHA5P54756 1037 aa18.3■□□□□ 0.52
SDR39U1-220ENST00000556548 TIAL1Q01085 375 aaKnown RBP eCLIP18.3■□□□□ 0.52
SDR39U1-220ENST00000556548 FUT11Q495W5 492 aa18.3■□□□□ 0.52
SDR39U1-220ENST00000556548 ZRANB3Q5FWF4 1079 aa18.3■□□□□ 0.52
SDR39U1-220ENST00000556548 AGAP9Q5VTM2 703 aa18.3■□□□□ 0.52
SDR39U1-220ENST00000556548 FAM45BPQ6NSW5 357 aa18.3■□□□□ 0.52
SDR39U1-220ENST00000556548 PSAPL1Q6NUJ1 521 aa18.3■□□□□ 0.52
SDR39U1-220ENST00000556548 AFTPHQ6ULP2 937 aa18.3■□□□□ 0.52
SDR39U1-220ENST00000556548 LYSMD3Q7Z3D4 306 aa18.3■□□□□ 0.52
SDR39U1-220ENST00000556548 GALNT7Q86SF2 657 aa18.3■□□□□ 0.52
SDR39U1-220ENST00000556548 NAT16Q8N8M0 369 aa18.3■□□□□ 0.52
SDR39U1-220ENST00000556548 TXNDC5Q8NBS9 432 aaKnown RBP18.3■□□□□ 0.52
SDR39U1-220ENST00000556548 FAM45AQ8TCE6 357 aa18.3■□□□□ 0.52
SDR39U1-220ENST00000556548 EID2BQ96D98 161 aa18.3■□□□□ 0.52
SDR39U1-220ENST00000556548 PPP1R36Q96LQ0 422 aa18.3■□□□□ 0.52
SDR39U1-220ENST00000556548 MRPL57Q9BQC6 102 aaKnown RBP18.3■□□□□ 0.52
SDR39U1-220ENST00000556548 BBS2Q9BXC9 721 aa18.3■□□□□ 0.52
SDR39U1-220ENST00000556548 GPR63Q9BZJ6 419 aa18.3■□□□□ 0.52
SDR39U1-220ENST00000556548 FAM50BQ9Y247 325 aa18.3■□□□□ 0.52
SDR39U1-220ENST00000556548 PRRC2BQ5JSZ5 2229 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms