RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 PMPCBO75439 489 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 PIAS2O75928 621 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 TRIM16O95361 564 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 LDOC1O95751 146 aaPredicted RBP12.11□□□□□ -0.47
SRP54-206ENST00000555317 CSF2P04141 144 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 MMP2P08253 660 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 NME1P15531 152 aaKnown RBP12.11□□□□□ -0.47
SRP54-206ENST00000555317 JUNDP17535 347 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 ETV3P41162 512 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 CCZ1BP86790 482 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 CCZ1P86791 482 aaPredicted RBP12.11□□□□□ -0.47
SRP54-206ENST00000555317 PPARDQ03181 441 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 FOXC1Q12948 553 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 BNIP3Q12983 259 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 GALNT3Q14435 633 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 NFATC4Q14934 902 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 RPS6KA1Q15418 735 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 SHBQ15464 509 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 SLC14A2Q15849 920 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 CCDC157Q569K6 752 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 FAXCQ5TGI0 409 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 RAET1GQ6H3X3 334 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 DBX2Q6ZNG2 339 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 PID1Q7Z2X4 250 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 KDELC2Q7Z4H8 507 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 TSPAN33Q86UF1 283 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 CCHCR1Q8TD31 782 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 LRRC45Q96CN5 670 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 DTD2Q96FN9 168 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 HES6Q96HZ4 224 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 CNDP2Q96KP4 475 aaKnown RBP12.11□□□□□ -0.47
SRP54-206ENST00000555317 COQ10AQ96MF6 247 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 APOOQ9BUR5 198 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 MLPHQ9BV36 600 aaPredicted RBP12.11□□□□□ -0.47
SRP54-206ENST00000555317 PHPT1Q9NRX4 125 aaPredicted RBP12.11□□□□□ -0.47
SRP54-206ENST00000555317 GPR27Q9NS67 375 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 EVA1BQ9NVM1 165 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 SPASTQ9UBP0 616 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 KLQ9UEF7 1012 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 APOBEC3BQ9UH17 382 aaKnown RBP12.11□□□□□ -0.47
SRP54-206ENST00000555317 FAM153AQ9UHL3 310 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 PPIL1Q9Y3C6 166 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 OR1A2Q9Y585 309 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 ANKRD66B4E2M5 251 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 DDX3YO15523 660 aaKnown RBP12.1□□□□□ -0.47
SRP54-206ENST00000555317 KCNN4O15554 427 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 SLC4A1P02730 911 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 FTH1P19P0C7X4 201 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 RBP3P10745 1247 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 CTSEP14091 401 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 TSHRP16473 764 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 NFKB1P19838 968 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 LHCGRP22888 699 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 DGKAP23743 735 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 KIAA1024LP59773 190 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 CDK18Q07002 472 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 WASHC5Q12768 1159 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 ESRP1Q6NXG1 681 aaKnown RBP12.1□□□□□ -0.47
SRP54-206ENST00000555317 AADACL2Q6P093 401 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 PNCKQ6P2M8 343 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 CRTC1Q6UUV9 634 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 ENPP7Q6UWV6 458 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 KDM7AQ6ZMT4 941 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 ZNF662Q6ZS27 426 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 HSD11B1LQ7Z5J1 315 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 HID1Q8IV36 788 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 PHACTR4Q8IZ21 702 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 ZNF567Q8N184 647 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 ZNF548Q8NEK5 533 aaPredicted RBP12.1□□□□□ -0.47
SRP54-206ENST00000555317 TRIM58Q8NG06 486 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 SPATA22Q8NHS9 363 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 BAHD1Q8TBE0 780 aaPredicted RBP12.1□□□□□ -0.47
SRP54-206ENST00000555317 AP2M1Q96CW1 435 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 WDR92Q96MX6 357 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 SRPK1Q96SB4 655 aaKnown RBP12.1□□□□□ -0.47
SRP54-206ENST00000555317 FAM118BQ9BPY3 351 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 DUSP23Q9BVJ7 150 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 FSD1LQ9BXM9 530 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 UBP1Q9NZI7 540 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 PKD2L2Q9NZM6 624 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 DOLKQ9UPQ8 538 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 PPP2R2CQ9Y2T4 447 aa12.1□□□□□ -0.47
SRP54-206ENST00000555317 COL5A1P20908 1838 aaPredicted RBP12.09□□□□□ -0.47
SRP54-206ENST00000555317 F5H423 210 aaPredicted RBP12.09□□□□□ -0.47
SRP54-206ENST00000555317 ENC1O14682 589 aa12.09□□□□□ -0.47
SRP54-206ENST00000555317 AQP9O43315 295 aa12.09□□□□□ -0.47
SRP54-206ENST00000555317 RASGRP1O95267 797 aa12.09□□□□□ -0.47
SRP54-206ENST00000555317 NDST3O95803 873 aa12.09□□□□□ -0.47
SRP54-206ENST00000555317 MT-CYBP00156 380 aaPredicted RBP12.09□□□□□ -0.47
SRP54-206ENST00000555317 PRLP01236 227 aa12.09□□□□□ -0.47
SRP54-206ENST00000555317 PYGLP06737 847 aa12.09□□□□□ -0.47
SRP54-206ENST00000555317 RBL1P28749 1068 aa12.09□□□□□ -0.47
SRP54-206ENST00000555317 GPR1P46091 355 aa12.09□□□□□ -0.47
SRP54-206ENST00000555317 DAB2P98082 770 aa12.09□□□□□ -0.47
SRP54-206ENST00000555317 EIF2B5Q13144 721 aaKnown RBP12.09□□□□□ -0.47
SRP54-206ENST00000555317 PRPSAP1Q14558 356 aa12.09□□□□□ -0.47
SRP54-206ENST00000555317 QPCTQ16769 361 aa12.09□□□□□ -0.47
SRP54-206ENST00000555317 PRRT3Q5FWE3 981 aa12.09□□□□□ -0.47
SRP54-206ENST00000555317 TPRG1LQ5T0D9 272 aa12.09□□□□□ -0.47
SRP54-206ENST00000555317 Q6ZVL8 140 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms