RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 HECTD2Q5U5R9 776 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 TMEM184AQ6ZMB5 413 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 ZCCHC23Q6ZST2 131 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 ASRGL1Q7L266 308 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 METTL3Q86U44 580 aaKnown RBP8.91□□□□□ -0.98
TDP1-210ENST00000554976 LDB1Q86U70 411 aaPredicted RBP8.91□□□□□ -0.98
TDP1-210ENST00000554976 PLPP6Q8IY26 295 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 LPCAT1Q8NF37 534 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 FRS2Q8WU20 508 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 OTUB2Q96DC9 234 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 ASIC4Q96FT7 647 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 BIRC8Q96P09 236 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 HTATIP2Q9BUP3 242 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 PBX4Q9BYU1 374 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 IQCGQ9H095 443 aaKnown RBP8.91□□□□□ -0.98
TDP1-210ENST00000554976 LMAN2LQ9H0V9 348 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 NPHS2Q9NP85 383 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 INTS10Q9NVR2 710 aaKnown RBP8.91□□□□□ -0.98
TDP1-210ENST00000554976 ETAA1Q9NY74 926 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 IL17CQ9P0M4 197 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 BUD23O43709 281 aaKnown RBP8.91□□□□□ -0.98
TDP1-210ENST00000554976 DNAJC8O75937 253 aaPredicted RBP8.91□□□□□ -0.98
TDP1-210ENST00000554976 PIGNO95427 931 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 SERPINE1P05121 402 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 AVPR1AP37288 418 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 SLC26A3P40879 764 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 SCTRP47872 440 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 SF3A3Q12874 501 aaKnown RBP eCLIP8.91□□□□□ -0.98
TDP1-210ENST00000554976 USP10Q14694 798 aaKnown RBP8.91□□□□□ -0.98
TDP1-210ENST00000554976 ATG16L1Q676U5 607 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 GLT6D1Q7Z4J2 308 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 TNS4Q8IZW8 715 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 MICALL1Q8N3F8 863 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 FSTL5Q8N475 847 aaPredicted RBP8.91□□□□□ -0.98
TDP1-210ENST00000554976 OR4L1Q8NH43 312 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 ANKRD49Q8WVL7 239 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 NXNL1Q96CM4 212 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 TUBGCP5Q96RT8 1024 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 NDNQ99608 321 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 CPEB1Q9BZB8 566 aaKnown RBP8.91□□□□□ -0.98
TDP1-210ENST00000554976 TRPV4Q9HBA0 871 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 NMRAL1Q9HBL8 299 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 CATSPERZQ9NTU4 200 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 THAP1Q9NVV9 213 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 ZNF711Q9Y462 761 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 TRBV5-4A0A0C4DH59 114 aa8.9□□□□□ -0.98
TDP1-210ENST00000554976 A0A0U1RQS6 177 aa8.9□□□□□ -0.98
TDP1-210ENST00000554976 TSPAN11A1L157 253 aa8.9□□□□□ -0.98
TDP1-210ENST00000554976 TMEM114B3SHH9 223 aa8.9□□□□□ -0.98
TDP1-210ENST00000554976 TK2O00142 265 aa8.9□□□□□ -0.98
TDP1-210ENST00000554976 LYPLA1O75608 230 aaPredicted RBP8.9□□□□□ -0.98
TDP1-210ENST00000554976 UBOX5O94941 541 aa8.9□□□□□ -0.98
TDP1-210ENST00000554976 CSPG5O95196 566 aa8.9□□□□□ -0.98
TDP1-210ENST00000554976 GLP2RO95838 553 aa8.9□□□□□ -0.98
TDP1-210ENST00000554976 T-ENOLP0DO92 83 aa8.9□□□□□ -0.98
TDP1-210ENST00000554976 CPA3P15088 417 aa8.9□□□□□ -0.98
TDP1-210ENST00000554976 STMN1P16949 149 aa8.9□□□□□ -0.98
TDP1-210ENST00000554976 CDKN1CP49918 316 aaPredicted RBP8.9□□□□□ -0.98
TDP1-210ENST00000554976 ADARP55265 1226 aaKnown RBP8.9□□□□□ -0.98
TDP1-210ENST00000554976 PFKPQ01813 784 aa8.9□□□□□ -0.98
TDP1-210ENST00000554976 EML3Q32P44 896 aa8.9□□□□□ -0.98
TDP1-210ENST00000554976 CTSL3PQ5NE16 218 aa8.9□□□□□ -0.98
TDP1-210ENST00000554976 NAIF1Q69YI7 327 aaPredicted RBP8.9□□□□□ -0.98
TDP1-210ENST00000554976 RETSATQ6NUM9 610 aa8.9□□□□□ -0.98
TDP1-210ENST00000554976 C22orf39Q6P5X5 142 aa8.9□□□□□ -0.98
TDP1-210ENST00000554976 AFTPHQ6ULP2 937 aa8.9□□□□□ -0.98
TDP1-210ENST00000554976 LSMEM2Q8N112 164 aa8.9□□□□□ -0.98
TDP1-210ENST00000554976 OR4K2Q8NGD2 314 aa8.9□□□□□ -0.98
TDP1-210ENST00000554976 OR2AP1Q8NGE2 309 aa8.9□□□□□ -0.98
TDP1-210ENST00000554976 STON2Q8WXE9 905 aa8.9□□□□□ -0.98
TDP1-210ENST00000554976 BHMTQ93088 406 aa8.9□□□□□ -0.98
TDP1-210ENST00000554976 ELMO2Q96JJ3 720 aa8.9□□□□□ -0.98
TDP1-210ENST00000554976 ADGRE3Q9BY15 652 aa8.9□□□□□ -0.98
TDP1-210ENST00000554976 P2RY12Q9H244 342 aa8.9□□□□□ -0.98
TDP1-210ENST00000554976 MCM8Q9UJA3 840 aa8.9□□□□□ -0.98
TDP1-210ENST00000554976 A0A0J9YYE9 177 aa8.9□□□□□ -0.99
TDP1-210ENST00000554976 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.9□□□□□ -0.99
TDP1-210ENST00000554976 CAPN8A6NHC0 703 aa8.9□□□□□ -0.99
TDP1-210ENST00000554976 AGAP14A8MT82 685 aa8.9□□□□□ -0.99
TDP1-210ENST00000554976 HOXC11O43248 304 aaPredicted RBP8.9□□□□□ -0.99
TDP1-210ENST00000554976 TRBC1P01850 177 aa8.9□□□□□ -0.99
TDP1-210ENST00000554976 APOA4P06727 396 aa8.9□□□□□ -0.99
TDP1-210ENST00000554976 TYRP14679 529 aa8.9□□□□□ -0.99
TDP1-210ENST00000554976 HMGCLP35914 325 aa8.9□□□□□ -0.99
TDP1-210ENST00000554976 NCALDP61601 193 aa8.9□□□□□ -0.99
TDP1-210ENST00000554976 DMC1Q14565 340 aa8.9□□□□□ -0.99
TDP1-210ENST00000554976 SEPT7Q16181 437 aaKnown RBP8.9□□□□□ -0.99
TDP1-210ENST00000554976 PTPRNQ16849 979 aa8.9□□□□□ -0.99
TDP1-210ENST00000554976 FAM45BPQ6NSW5 357 aa8.9□□□□□ -0.99
TDP1-210ENST00000554976 PSAPL1Q6NUJ1 521 aa8.9□□□□□ -0.99
TDP1-210ENST00000554976 CAMK1DQ8IU85 385 aa8.9□□□□□ -0.99
TDP1-210ENST00000554976 ARID3BQ8IVW6 561 aaPredicted RBP8.9□□□□□ -0.99
TDP1-210ENST00000554976 ETFBKMTQ8IXQ9 262 aa8.9□□□□□ -0.99
TDP1-210ENST00000554976 PHTF2Q8N3S3 785 aa8.9□□□□□ -0.99
TDP1-210ENST00000554976 FAM45AQ8TCE6 357 aa8.9□□□□□ -0.99
TDP1-210ENST00000554976 HEXDCQ8WVB3 486 aa8.9□□□□□ -0.99
TDP1-210ENST00000554976 THOC1Q96FV9 657 aaKnown RBP8.9□□□□□ -0.99
TDP1-210ENST00000554976 MCCC1Q96RQ3 725 aaPredicted RBP8.9□□□□□ -0.99
TDP1-210ENST00000554976 AARSD1Q9BTE6 412 aaKnown RBP8.9□□□□□ -0.99
TDP1-210ENST00000554976 TMEM120AQ9BXJ8 343 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms