RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 RPS3AP61247 264 aaKnown RBP5.12□□□□□ -1.59
SCFD1-211ENST00000554437 SEC61A1P61619 476 aaKnown RBP5.12□□□□□ -1.59
SCFD1-211ENST00000554437 DHX34Q14147 1143 aaKnown RBP5.12□□□□□ -1.59
SCFD1-211ENST00000554437 FRG1Q14331 258 aaKnown RBP5.12□□□□□ -1.59
SCFD1-211ENST00000554437 DPCR1Q3MIW9 517 aa5.12□□□□□ -1.59
SCFD1-211ENST00000554437 SLC45A4Q5BKX6 768 aa5.12□□□□□ -1.59
SCFD1-211ENST00000554437 PPP6R3Q5H9R7 873 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-211ENST00000554437 NADSYN1Q6IA69 706 aa5.12□□□□□ -1.59
SCFD1-211ENST00000554437 DSTYKQ6XUX3 929 aa5.12□□□□□ -1.59
SCFD1-211ENST00000554437 QSOX2Q6ZRP7 698 aa5.12□□□□□ -1.59
SCFD1-211ENST00000554437 FAM43BQ6ZT52 329 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-211ENST00000554437 DSELQ8IZU8 1212 aa5.12□□□□□ -1.59
SCFD1-211ENST00000554437 PGBD5Q8N414 524 aa5.12□□□□□ -1.59
SCFD1-211ENST00000554437 CREB3L4Q8TEY5 395 aa5.12□□□□□ -1.59
SCFD1-211ENST00000554437 HDAC2Q92769 488 aaKnown RBP5.12□□□□□ -1.59
SCFD1-211ENST00000554437 INTS12Q96CB8 462 aaKnown RBP5.12□□□□□ -1.59
SCFD1-211ENST00000554437 ERP27Q96DN0 273 aa5.12□□□□□ -1.59
SCFD1-211ENST00000554437 KXD1Q9BQD3 176 aa5.12□□□□□ -1.59
SCFD1-211ENST00000554437 ESRP2Q9H6T0 727 aaKnown RBP5.12□□□□□ -1.59
SCFD1-211ENST00000554437 CNGB3Q9NQW8 809 aa5.12□□□□□ -1.59
SCFD1-211ENST00000554437 OLA1Q9NTK5 396 aaKnown RBP5.12□□□□□ -1.59
SCFD1-211ENST00000554437 SLCO3A1Q9UIG8 710 aa5.12□□□□□ -1.59
SCFD1-211ENST00000554437 TRIP12Q14669 1992 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-211ENST00000554437 ATXN2Q99700 1313 aaKnown RBP5.12□□□□□ -1.59
SCFD1-211ENST00000554437 CPED1A4D0V7 1026 aa5.11□□□□□ -1.59
SCFD1-211ENST00000554437 PRSS47A8MTI9 375 aa5.11□□□□□ -1.59
SCFD1-211ENST00000554437 PROB1E7EW31 1015 aa5.11□□□□□ -1.59
SCFD1-211ENST00000554437 CYC1P08574 325 aa5.11□□□□□ -1.59
SCFD1-211ENST00000554437 IL7RP16871 459 aa5.11□□□□□ -1.59
SCFD1-211ENST00000554437 BSGP35613 385 aa5.11□□□□□ -1.59
SCFD1-211ENST00000554437 TUBA1BP68363 451 aa5.11□□□□□ -1.59
SCFD1-211ENST00000554437 MYBPHQ13203 477 aa5.11□□□□□ -1.59
SCFD1-211ENST00000554437 PDE1CQ14123 709 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-211ENST00000554437 TOMM20Q15388 145 aa5.11□□□□□ -1.59
SCFD1-211ENST00000554437 EIF2S3LQ2VIR3 472 aaKnown RBP5.11□□□□□ -1.59
SCFD1-211ENST00000554437 AMZ1Q400G9 498 aa5.11□□□□□ -1.59
SCFD1-211ENST00000554437 FAM69BQ5VUD6 431 aa5.11□□□□□ -1.59
SCFD1-211ENST00000554437 TMTC3Q6ZXV5 915 aa5.11□□□□□ -1.59
SCFD1-211ENST00000554437 WDR63Q8IWG1 891 aa5.11□□□□□ -1.59
SCFD1-211ENST00000554437 CCDC13Q8IYE1 715 aa5.11□□□□□ -1.59
SCFD1-211ENST00000554437 ADAMTS15Q8TE58 950 aa5.11□□□□□ -1.59
SCFD1-211ENST00000554437 FAM149B1Q96BN6 582 aa5.11□□□□□ -1.59
SCFD1-211ENST00000554437 RTP4Q96DX8 246 aa5.11□□□□□ -1.59
SCFD1-211ENST00000554437 SLC41A2Q96JW4 573 aa5.11□□□□□ -1.59
SCFD1-211ENST00000554437 OR1F2PQ96R84 312 aa5.11□□□□□ -1.59
SCFD1-211ENST00000554437 FAM110AQ9BQ89 295 aa5.11□□□□□ -1.59
SCFD1-211ENST00000554437 HAUS8Q9BT25 410 aa5.11□□□□□ -1.59
SCFD1-211ENST00000554437 IFIH1Q9BYX4 1025 aaKnown RBP5.11□□□□□ -1.59
SCFD1-211ENST00000554437 NOX4Q9NPH5 578 aa5.11□□□□□ -1.59
SCFD1-211ENST00000554437 CD93Q9NPY3 652 aa5.11□□□□□ -1.59
SCFD1-211ENST00000554437 HINT3Q9NQE9 182 aaKnown RBP5.11□□□□□ -1.59
SCFD1-211ENST00000554437 CLIC5Q9NZA1 410 aa5.11□□□□□ -1.59
SCFD1-211ENST00000554437 LIMA1Q9UHB6 759 aaKnown RBP5.11□□□□□ -1.59
SCFD1-211ENST00000554437 NFS1Q9Y697 457 aa5.11□□□□□ -1.59
SCFD1-211ENST00000554437 IGLV5-37A0A075B6J1 123 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 FAM237AA0A1B0GTK4 181 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 AKR1B15C9JRZ8 316 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-211ENST00000554437 GTPBP1O00178 669 aaKnown RBP5.1□□□□□ -1.59
SCFD1-211ENST00000554437 IKBKBO14920 756 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 FIBPO43427 364 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 PAGE4O60829 102 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 NDUFS7O75251 213 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 ZBTB11O95625 1053 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-211ENST00000554437 IGHV4-30-4P0DP06 118 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 PBX3P40426 434 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 METAP2P50579 478 aaKnown RBP eCLIP5.1□□□□□ -1.59
SCFD1-211ENST00000554437 GOLGA8DPQ0D2H9 430 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 GRSF1Q12849 480 aaKnown RBP eCLIP5.1□□□□□ -1.59
SCFD1-211ENST00000554437 OLIG2Q13516 323 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 KEAP1Q14145 624 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 KRT32Q14532 448 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 NFATC4Q14934 902 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 SLC39A14Q15043 492 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 ASIC2Q16515 512 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 CALCRLQ16602 461 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 USP41Q3LFD5 358 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 C6orf141Q5SZD1 244 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 LCE1AQ5T7P2 110 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 HAUS3Q68CZ6 603 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 ZNF324BQ6AW86 544 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-211ENST00000554437 METTL2BQ6P1Q9 378 aaKnown RBP5.1□□□□□ -1.59
SCFD1-211ENST00000554437 RHBDF2Q6PJF5 856 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 DLK2Q6UY11 383 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 TAOK1Q7L7X3 1001 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 ADHFE1Q8IWW8 467 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 SPATA6LQ8N4H0 392 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 NEK9Q8TD19 979 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 RND1Q92730 232 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 SCMH1Q96GD3 660 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 METTL2AQ96IZ6 378 aaKnown RBP5.1□□□□□ -1.59
SCFD1-211ENST00000554437 MAP7D2Q96T17 732 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 CSF3RQ99062 836 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 TMEM47Q9BQJ4 181 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 STRA6Q9BX79 667 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 IL25Q9H293 177 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 C6orf106Q9H6K1 298 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-211ENST00000554437 C17orf75Q9HAS0 396 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 FBRSL1Q9HCM7 1045 aaKnown RBP5.1□□□□□ -1.59
SCFD1-211ENST00000554437 DLGAP2Q9P1A6 1054 aa5.1□□□□□ -1.59
SCFD1-211ENST00000554437 KCNE2Q9Y6J6 123 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms