RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 TSGA10Q9BZW7 698 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 USP29Q9HBJ7 922 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 EVA1BQ9NVM1 165 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 SPASTQ9UBP0 616 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 RPL26L1Q9UNX3 145 aaKnown RBP13.09□□□□□ -0.31
SHMT2-211ENST00000554310 PPIL1Q9Y3C6 166 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 MRFAP1Q9Y605 127 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 FRYQ5TBA9 3013 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 hCG_1818297A0A087WSY0 165 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 TMEM8BA6NDV4 472 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 RCCD1A6NED2 376 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 CAPN8A6NHC0 703 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 CACNB4O00305 520 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-211ENST00000554310 PJA2O43164 708 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 AQP9O43315 295 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 KRT86O43790 486 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 ZRANB2O95218 330 aaKnown RBP eCLIP13.08□□□□□ -0.32
SHMT2-211ENST00000554310 JCHAINP01591 159 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 GIMD1P0DJR0 217 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 GM2AP17900 193 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 KELP23276 732 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 ACP1P24666 158 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 MARCKSL1P49006 195 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 EPHB1P54762 984 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 DAB2P98082 770 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 PPARDQ03181 441 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 DNAJC3Q13217 504 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 INPP5AQ14642 412 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 PRKD1Q15139 912 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-211ENST00000554310 SMAD1Q15797 465 aaKnown RBP13.08□□□□□ -0.32
SHMT2-211ENST00000554310 PPP2R5EQ16537 467 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 CCDC157Q569K6 752 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 ZCCHC8Q6NZY4 707 aaKnown RBP13.08□□□□□ -0.32
SHMT2-211ENST00000554310 NPNTQ6UXI9 565 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 CCDC50Q8IVM0 306 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 RCOR2Q8IZ40 523 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 RBFAQ8N0V3 343 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 LRRN4Q8WUT4 740 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 DTD2Q96FN9 168 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 WDR92Q96MX6 357 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 APOOQ9BUR5 198 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 LRRC61Q9BV99 259 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 SLC13A1Q9BZW2 595 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 WDR26Q9H7D7 661 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 NCKIPSDQ9NZQ3 722 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 KLF15Q9UIH9 416 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 SALL4Q9UJQ4 1053 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 OR1A2Q9Y585 309 aa13.08□□□□□ -0.32
SHMT2-211ENST00000554310 KNTC1P50748 2209 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 A0A0J9YYE9 177 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 CTAGE9A4FU28 777 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 A8MX80 341 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 K7ESM1 405 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 TPP1O14773 563 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 MTSS1O43312 755 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 CST8O60676 142 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 RASGRP1O95267 797 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 TRBC1P01850 177 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 PROS1P07225 676 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 PDHA1P08559 390 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 HOXC4P09017 264 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-211ENST00000554310 ALPIP09923 528 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 CKMT1AP12532 417 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 TSHRP16473 764 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 ZNF30P17039 623 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 TEAD1P28347 426 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 CTNNA1P35221 906 aaKnown RBP13.07□□□□□ -0.32
SHMT2-211ENST00000554310 NAP1L1P55209 391 aaKnown RBP13.07□□□□□ -0.32
SHMT2-211ENST00000554310 NIPAL4Q0D2K0 466 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 IHHQ14623 411 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 SLC14A2Q15849 920 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 DHRS13Q6UX07 377 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 CBARPQ8N350 705 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-211ENST00000554310 SLC35F6Q8N357 371 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 FSTL5Q8N475 847 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-211ENST00000554310 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.07□□□□□ -0.32
SHMT2-211ENST00000554310 CNTD1Q8N815 330 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 FAM181AQ8N9Y4 354 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 PLA2G15Q8NCC3 412 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 LPCAT1Q8NF37 534 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 LMX1AQ8TE12 382 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 KRT35Q92764 455 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 LYSMD1Q96S90 227 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 NAPGQ99747 312 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-211ENST00000554310 PCDH9Q9HC56 1237 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 KLQ9UEF7 1012 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 PLXNB3Q9ULL4 1909 aa13.07□□□□□ -0.32
SHMT2-211ENST00000554310 PKD1L2Q7Z442 2459 aa13.06□□□□□ -0.32
SHMT2-211ENST00000554310 APC2O95996 2303 aa13.06□□□□□ -0.32
SHMT2-211ENST00000554310 ACACAQ13085 2346 aa13.06□□□□□ -0.32
SHMT2-211ENST00000554310 CCDC66A2RUB6 948 aa13.06□□□□□ -0.32
SHMT2-211ENST00000554310 EFCAB8A8MWE9 144 aa13.06□□□□□ -0.32
SHMT2-211ENST00000554310 C1QTNF9BB2RNN3 333 aa13.06□□□□□ -0.32
SHMT2-211ENST00000554310 LMO7DNF2Z398 122 aa13.06□□□□□ -0.32
SHMT2-211ENST00000554310 PDE2AO00408 941 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-211ENST00000554310 MMP2P08253 660 aa13.06□□□□□ -0.32
SHMT2-211ENST00000554310 C1QTNF9P0C862 333 aa13.06□□□□□ -0.32
SHMT2-211ENST00000554310 MYCLP1P12525 358 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-211ENST00000554310 PECAM1P16284 738 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-211ENST00000554310 CTPS1P17812 591 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms