RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 CCL7P80098 99 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 CDR2Q01850 454 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 NFATC3Q12968 1075 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 NFATC4Q14934 902 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 ALG11Q2TAA5 492 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 ARTNQ5T4W7 220 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 WDR59Q6PJI9 974 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 TRIM72Q6ZMU5 477 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 USP53Q70EK8 1073 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 B3GNT8Q7Z7M8 397 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 CLEC14AQ86T13 490 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 DNAAF5Q86Y56 855 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 PYROXD2Q8N2H3 581 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 GOLGA6L1Q8N7Z2 621 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 RTL3Q8N8U3 475 aaKnown RBP8.9□□□□□ -0.98
TDP1-208ENST00000553989 Q8N9G6 341 aaPredicted RBP8.9□□□□□ -0.98
TDP1-208ENST00000553989 ACRBPQ8NEB7 543 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 HMCESQ96FZ2 354 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 LIN37Q96GY3 246 aaPredicted RBP8.9□□□□□ -0.98
TDP1-208ENST00000553989 PRR11Q96HE9 360 aaPredicted RBP8.9□□□□□ -0.98
TDP1-208ENST00000553989 TMEM74Q96NL1 305 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 MAGEB5Q9BZ81 275 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 CLMPQ9H6B4 373 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 CATSPERBQ9H7T0 1116 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 ANKZF1Q9H8Y5 726 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 NLRC4Q9NPP4 1024 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 FAM207AQ9NSI2 230 aaPredicted RBP8.9□□□□□ -0.98
TDP1-208ENST00000553989 ADAM22Q9P0K1 906 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 DKK3Q9UBP4 350 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 UBA2Q9UBT2 640 aaPredicted RBP8.9□□□□□ -0.98
TDP1-208ENST00000553989 MOSPD1Q9UJG1 213 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 NOCTQ9UK39 431 aaKnown RBP8.9□□□□□ -0.98
TDP1-208ENST00000553989 DAAM1Q9Y4D1 1078 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 OR1A2Q9Y585 309 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 ZNF462Q96JM2 2506 aa8.9□□□□□ -0.99
TDP1-208ENST00000553989 SSU72P8A0A1W2PR75 194 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 POM121CA8CG34 1229 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 B4DGG1 531 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 RASA4BC9J798 803 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 CACNB4O00305 520 aaPredicted RBP8.89□□□□□ -0.99
TDP1-208ENST00000553989 NTN3O00634 580 aaPredicted RBP8.89□□□□□ -0.99
TDP1-208ENST00000553989 POLR3GO15318 223 aaPredicted RBP8.89□□□□□ -0.99
TDP1-208ENST00000553989 INSIG1O15503 277 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 RASA4O43374 803 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 TNFP01375 233 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 CYP1A1P04798 512 aaPredicted RBP8.89□□□□□ -0.99
TDP1-208ENST00000553989 PRKCGP05129 697 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 CALB1P05937 261 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 TIMP2P16035 220 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 TCP1P17987 556 aaKnown RBP8.89□□□□□ -0.99
TDP1-208ENST00000553989 OAS2P29728 719 aaKnown RBP8.89□□□□□ -0.99
TDP1-208ENST00000553989 UGT1A5P35504 534 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 SOX5P35711 763 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 PEX5P50542 639 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 SUOXP51687 545 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 SKOR1P84550 965 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 FMO1Q01740 532 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 KCNC4Q03721 635 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 INPP5AQ14642 412 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 GRM3Q14832 879 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 PARP15Q460N3 678 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 TMEM52BQ4KMG9 183 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 GLE1Q53GS7 698 aaKnown RBP8.89□□□□□ -0.99
TDP1-208ENST00000553989 INO80DQ53TQ3 878 aaPredicted RBP8.89□□□□□ -0.99
TDP1-208ENST00000553989 DPY19L2P1Q6NXN4 242 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 LVRNQ6Q4G3 990 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 TAF8Q7Z7C8 310 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 CCNJLQ8IV13 435 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 MMGT1Q8N4V1 131 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 OR6C4Q8NGE1 309 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 FAM71BQ8TC56 605 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 SNRNP27Q8WVK2 155 aaKnown RBP8.89□□□□□ -0.99
TDP1-208ENST00000553989 NTAN1Q96AB6 310 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 WDR92Q96MX6 357 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 APOOQ9BUR5 198 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 KLC2Q9H0B6 622 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 TSPYL1Q9H0U9 437 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 LRRN3Q9H3W5 708 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 SUDS3Q9H7L9 328 aaPredicted RBP8.89□□□□□ -0.99
TDP1-208ENST00000553989 PCDH12Q9NPG4 1184 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 SEPT10Q9P0V9 454 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 ATXN7L1Q9ULK2 861 aaPredicted RBP8.89□□□□□ -0.99
TDP1-208ENST00000553989 NEU3Q9UQ49 428 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 LOXL2Q9Y4K0 774 aa8.89□□□□□ -0.99
TDP1-208ENST00000553989 RP1P56715 2156 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 FGF10O15520 208 aaPredicted RBP8.88□□□□□ -0.99
TDP1-208ENST00000553989 PJA2O43164 708 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 SASH3O75995 380 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 SEC31AO94979 1220 aaKnown RBP8.88□□□□□ -0.99
TDP1-208ENST00000553989 IVLP07476 585 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 LIPCP11150 499 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 RFC1P35251 1148 aaPredicted RBP8.88□□□□□ -0.99
TDP1-208ENST00000553989 STAT1P42224 750 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 PAFAH1B1P43034 410 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 MAGEA1P43355 309 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 KLK7P49862 253 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 LIG3P49916 1009 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 MAPK10P53779 464 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 YBEYP58557 167 aaPredicted RBP8.88□□□□□ -0.99
TDP1-208ENST00000553989 TPI1P60174 286 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms