RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 HMGCLP35914 325 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 ETV3P41162 512 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 PTGER3P43115 390 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 NPY2RP49146 381 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 CREB5Q02930 508 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 SGCGQ13326 291 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 MTM1Q13496 603 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 FGL2Q14314 439 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 POU6F1Q14863 301 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 TAF1AQ15573 450 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-209ENST00000553949 TRADDQ15628 312 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 ELF2Q15723 593 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 SETMARQ53H47 684 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-209ENST00000553949 CERCAMQ5T4B2 595 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 SLC41A1Q8IVJ1 513 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 TTC30BQ8N4P2 665 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 ASB12Q8WXK4 309 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 SEC14L1Q92503 715 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 SNX19Q92543 992 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 KLK6Q92876 244 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 FOXJ1Q92949 421 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 ZC3H10Q96K80 434 aaKnown RBP12.24□□□□□ -0.45
SHMT2-209ENST00000553949 COQ10AQ96MF6 247 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 C1QTNF2Q9BXJ5 285 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 SLC17A9Q9BYT1 436 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 KCNH6Q9H252 994 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 GRHL1Q9NZI5 618 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.24□□□□□ -0.45
SHMT2-209ENST00000553949 BFARQ9NZS9 450 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 DMGDHQ9UI17 866 aaKnown RBP12.24□□□□□ -0.45
SHMT2-209ENST00000553949 ARL5AQ9Y689 179 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 ANKRD36A6QL64 1941 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 A0A1W2PPC4 97 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 RGSL1A5PLK6 1076 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 C2orf81A6NN90 581 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 BHMG1C9JSJ3 638 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-209ENST00000553949 WNT9AO14904 365 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 SLC31A1O15431 190 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 LDB2O43679 373 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 RHOBTB1O94844 696 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 MGAT1P26572 445 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 CD27P26842 260 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 NUDT1P36639 197 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 MAGEA3P43357 314 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 SPINT3P49223 89 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 DHPSP49366 369 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-209ENST00000553949 PTPN5P54829 565 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 SEPT6Q14141 434 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 CCDC38Q502W7 563 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 TEX35Q5T0J7 233 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 PRR23BQ6ZRT6 265 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 RFLNAQ6ZTI6 216 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 Q6ZVL8 140 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 ARMCX6Q7L4S7 300 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 CYP2U1Q7Z449 544 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 TECPR1Q7Z6L1 1165 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 RAVER1Q8IY67 606 aaKnown RBP12.23□□□□□ -0.45
SHMT2-209ENST00000553949 ART4Q93070 314 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 DTD2Q96FN9 168 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 PWWP2AQ96N64 755 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 RANBP9Q96S59 729 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 ORAI3Q9BRQ5 295 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 FRMD8Q9BZ67 464 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-209ENST00000553949 IL22Q9GZX6 179 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 IRF2BPLQ9H1B7 796 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 EPC1Q9H2F5 836 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 EBF2Q9HAK2 575 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 EPB41L5Q9HCM4 733 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 BPIFA1Q9NP55 256 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 RRAGDQ9NQL2 400 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-209ENST00000553949 SYBUQ9NX95 663 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 PKD2L2Q9NZM6 624 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 IL17CQ9P0M4 197 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 DMTF1Q9Y222 760 aa12.23□□□□□ -0.45
SHMT2-209ENST00000553949 HEATR9A2RTY3 570 aa12.22□□□□□ -0.45
SHMT2-209ENST00000553949 MROH6A6NGR9 719 aa12.22□□□□□ -0.45
SHMT2-209ENST00000553949 SDR42E2A6NKP2 422 aa12.22□□□□□ -0.45
SHMT2-209ENST00000553949 RAD51BO15315 384 aa12.22□□□□□ -0.45
SHMT2-209ENST00000553949 STX7O15400 261 aaKnown RBP12.22□□□□□ -0.45
SHMT2-209ENST00000553949 BUD23O43709 281 aaKnown RBP12.22□□□□□ -0.45
SHMT2-209ENST00000553949 RHOXF2BP0C7M4 288 aa12.22□□□□□ -0.45
SHMT2-209ENST00000553949 LPOP22079 712 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-209ENST00000553949 HNRNPA2B1P22626 353 aaKnown RBP12.22□□□□□ -0.45
SHMT2-209ENST00000553949 ADRA1DP25100 572 aa12.22□□□□□ -0.45
SHMT2-209ENST00000553949 MAOBP27338 520 aa12.22□□□□□ -0.45
SHMT2-209ENST00000553949 ZNF140P52738 457 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-209ENST00000553949 PLTPP55058 493 aa12.22□□□□□ -0.45
SHMT2-209ENST00000553949 CRADDP78560 199 aa12.22□□□□□ -0.45
SHMT2-209ENST00000553949 PDE1BQ01064 536 aa12.22□□□□□ -0.45
SHMT2-209ENST00000553949 CAV1Q03135 178 aa12.22□□□□□ -0.45
SHMT2-209ENST00000553949 LAMB3Q13751 1172 aa12.22□□□□□ -0.45
SHMT2-209ENST00000553949 PTPRCAPQ14761 206 aa12.22□□□□□ -0.45
SHMT2-209ENST00000553949 LRRC14Q15048 493 aa12.22□□□□□ -0.45
SHMT2-209ENST00000553949 AGERQ15109 404 aa12.22□□□□□ -0.45
SHMT2-209ENST00000553949 PCID2Q5JVF3 399 aa12.22□□□□□ -0.45
SHMT2-209ENST00000553949 WDR45BQ5MNZ6 344 aa12.22□□□□□ -0.45
SHMT2-209ENST00000553949 FNBP1LQ5T0N5 605 aa12.22□□□□□ -0.45
SHMT2-209ENST00000553949 LYSMD4Q5XG99 296 aa12.22□□□□□ -0.45
SHMT2-209ENST00000553949 ZDHHC24Q6UX98 284 aa12.22□□□□□ -0.45
SHMT2-209ENST00000553949 NRSN1Q8IZ57 195 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms