RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 PRKD1Q15139 912 aaPredicted RBP15.35■□□□□ 0.05
SHMT2-204ENST00000553324 CCDC70Q6NSX1 233 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 PHACTR4Q8IZ21 702 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 FSTL5Q8N475 847 aaPredicted RBP15.35■□□□□ 0.05
SHMT2-204ENST00000553324 ZNF548Q8NEK5 533 aaPredicted RBP15.35■□□□□ 0.05
SHMT2-204ENST00000553324 LMX1AQ8TE12 382 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 SCG3Q8WXD2 468 aaKnown RBP15.35■□□□□ 0.05
SHMT2-204ENST00000553324 GLMNQ92990 594 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 DTD2Q96FN9 168 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 IMP4Q96G21 291 aaKnown RBP15.35■□□□□ 0.05
SHMT2-204ENST00000553324 TEKT5Q96M29 485 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 SRPK1Q96SB4 655 aaKnown RBP15.35■□□□□ 0.05
SHMT2-204ENST00000553324 MLPHQ9BV36 600 aaPredicted RBP15.35■□□□□ 0.05
SHMT2-204ENST00000553324 HEMGNQ9BXL5 484 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 WDR26Q9H7D7 661 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 UCKL1Q9NWZ5 548 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 KLF15Q9UIH9 416 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 OR1A2Q9Y585 309 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 DOCK9Q9BZ29 2069 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 GRID2IPA4D2P6 1211 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 RGSL1A5PLK6 1076 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 K7ESM1 405 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 TRIM38O00635 465 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 TNFRSF10CO14798 259 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 KRT86O43790 486 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 RFPL3O75679 317 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 PRLP01236 227 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 MMP2P08253 660 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 ALPIP09923 528 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 CTSEP14091 401 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 LHCGRP22888 699 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 ACP1P24666 158 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 PTPN3P26045 913 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 TNNT3P45378 269 aaPredicted RBP15.34■□□□□ 0.05
SHMT2-204ENST00000553324 MARCKSL1P49006 195 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 HK3P52790 923 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 SRP54P61011 504 aaKnown RBP15.34■□□□□ 0.05
SHMT2-204ENST00000553324 DAB2P98082 770 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 E2F1Q01094 437 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 PTSQ03393 145 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 LLGL1Q15334 1064 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 ELOCQ15369 112 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 PROX2Q3B8N5 592 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 PRRT3Q5FWE3 981 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 TPRG1LQ5T0D9 272 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 DENND2CQ68D51 928 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 ZCCHC8Q6NZY4 707 aaKnown RBP15.34■□□□□ 0.05
SHMT2-204ENST00000553324 LVRNQ6Q4G3 990 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 CRTC1Q6UUV9 634 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 TMPRSS7Q7RTY8 843 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 ZC3H18Q86VM9 953 aaKnown RBP15.34■□□□□ 0.05
SHMT2-204ENST00000553324 TMPRSS12Q86WS5 348 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 NRSN1Q8IZ57 195 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 CCHCR1Q8TD31 782 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 HAUS1Q96CS2 278 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 WDR92Q96MX6 357 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 OSBPL8Q9BZF1 889 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 GLOD4Q9HC38 313 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 PHPT1Q9NRX4 125 aaPredicted RBP15.34■□□□□ 0.05
SHMT2-204ENST00000553324 KLQ9UEF7 1012 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 TRHDEQ9UKU6 1024 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 DGKBQ9Y6T7 804 aa15.34■□□□□ 0.05
SHMT2-204ENST00000553324 CAPN8A6NHC0 703 aa15.33■□□□□ 0.04
SHMT2-204ENST00000553324 LMO7DNF2Z398 122 aa15.33■□□□□ 0.04
SHMT2-204ENST00000553324 FFAR2O15552 330 aa15.33■□□□□ 0.04
SHMT2-204ENST00000553324 TOP3BO95985 862 aaKnown RBP15.33■□□□□ 0.04
SHMT2-204ENST00000553324 PTMAP06454 111 aaKnown RBP15.33■□□□□ 0.04
SHMT2-204ENST00000553324 GIMD1P0DJR0 217 aa15.33■□□□□ 0.04
SHMT2-204ENST00000553324 CKMT1AP12532 417 aa15.33■□□□□ 0.04
SHMT2-204ENST00000553324 PECAM1P16284 738 aaPredicted RBP15.33■□□□□ 0.04
SHMT2-204ENST00000553324 GM2AP17900 193 aa15.33■□□□□ 0.04
SHMT2-204ENST00000553324 ETV3P41162 512 aa15.33■□□□□ 0.04
SHMT2-204ENST00000553324 RPIAP49247 311 aa15.33■□□□□ 0.04
SHMT2-204ENST00000553324 CDK18Q07002 472 aa15.33■□□□□ 0.04
SHMT2-204ENST00000553324 ADCY2Q08462 1091 aa15.33■□□□□ 0.04
SHMT2-204ENST00000553324 IHHQ14623 411 aa15.33■□□□□ 0.04
SHMT2-204ENST00000553324 SMAD1Q15797 465 aaKnown RBP15.33■□□□□ 0.04
SHMT2-204ENST00000553324 LRRC66Q68CR7 880 aa15.33■□□□□ 0.04
SHMT2-204ENST00000553324 Q6ZVL8 140 aa15.33■□□□□ 0.04
SHMT2-204ENST00000553324 ZNF765Q7L2R6 523 aa15.33■□□□□ 0.04
SHMT2-204ENST00000553324 PID1Q7Z2X4 250 aa15.33■□□□□ 0.04
SHMT2-204ENST00000553324 HSD11B1LQ7Z5J1 315 aa15.33■□□□□ 0.04
SHMT2-204ENST00000553324 TECPR1Q7Z6L1 1165 aa15.33■□□□□ 0.04
SHMT2-204ENST00000553324 TSPAN33Q86UF1 283 aa15.33■□□□□ 0.04
SHMT2-204ENST00000553324 HID1Q8IV36 788 aa15.33■□□□□ 0.04
SHMT2-204ENST00000553324 PLA2G15Q8NCC3 412 aa15.33■□□□□ 0.04
SHMT2-204ENST00000553324 LPCAT1Q8NF37 534 aa15.33■□□□□ 0.04
SHMT2-204ENST00000553324 OR56A4Q8NGH8 313 aa15.33■□□□□ 0.04
SHMT2-204ENST00000553324 HTR3CQ8WXA8 447 aa15.33■□□□□ 0.04
SHMT2-204ENST00000553324 FUBP1Q96AE4 644 aaKnown RBP15.33■□□□□ 0.04
SHMT2-204ENST00000553324 RBM15Q96T37 977 aaKnown RBP eCLIP15.33■□□□□ 0.04
SHMT2-204ENST00000553324 DESI2Q9BSY9 194 aa15.33■□□□□ 0.04
SHMT2-204ENST00000553324 DOLKQ9UPQ8 538 aa15.33■□□□□ 0.04
SHMT2-204ENST00000553324 ADGRG1Q9Y653 693 aa15.33■□□□□ 0.04
SHMT2-204ENST00000553324 SPEGQ15772 3267 aa15.32■□□□□ 0.04
SHMT2-204ENST00000553324 TMEM131Q92545 1883 aa15.32■□□□□ 0.04
SHMT2-204ENST00000553324 GOLGA6L9A6NEM1 432 aa15.32■□□□□ 0.04
SHMT2-204ENST00000553324 H7C0C1 242 aa15.32■□□□□ 0.04
SHMT2-204ENST00000553324 EPOP01588 193 aa15.32■□□□□ 0.04
SHMT2-204ENST00000553324 ANXA6P08133 673 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms