RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 KLHL3Q9UH77 587 aa11.75□□□□□ -0.53
SNRPF-205ENST00000553192 PLEKHM1Q9Y4G2 1056 aa11.75□□□□□ -0.53
SNRPF-205ENST00000553192 ANKRD36A6QL64 1941 aa11.74□□□□□ -0.53
SNRPF-205ENST00000553192 TSPAN11A1L157 253 aa11.74□□□□□ -0.53
SNRPF-205ENST00000553192 BUB1BO60566 1050 aaPredicted RBP11.74□□□□□ -0.53
SNRPF-205ENST00000553192 RECQL5O94762 991 aaPredicted RBP11.74□□□□□ -0.53
SNRPF-205ENST00000553192 GLI1P08151 1106 aa11.74□□□□□ -0.53
SNRPF-205ENST00000553192 SNRPB2P08579 225 aaKnown RBP11.74□□□□□ -0.53
SNRPF-205ENST00000553192 MMP12P39900 470 aa11.74□□□□□ -0.53
SNRPF-205ENST00000553192 GARSP41250 739 aaKnown RBP11.74□□□□□ -0.53
SNRPF-205ENST00000553192 PTGIRP43119 386 aa11.74□□□□□ -0.53
SNRPF-205ENST00000553192 NOP2P46087 812 aaKnown RBP11.74□□□□□ -0.53
SNRPF-205ENST00000553192 FASLGP48023 281 aa11.74□□□□□ -0.53
SNRPF-205ENST00000553192 CXCR3P49682 368 aa11.74□□□□□ -0.53
SNRPF-205ENST00000553192 SUOXP51687 545 aa11.74□□□□□ -0.53
SNRPF-205ENST00000553192 PER3P56645 1201 aa11.74□□□□□ -0.53
SNRPF-205ENST00000553192 FOXM1Q08050 763 aa11.74□□□□□ -0.53
SNRPF-205ENST00000553192 UGP2Q16851 508 aa11.74□□□□□ -0.53
SNRPF-205ENST00000553192 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.74□□□□□ -0.53
SNRPF-205ENST00000553192 ZSWIM9Q86XI8 627 aa11.74□□□□□ -0.53
SNRPF-205ENST00000553192 HPS6Q86YV9 775 aa11.74□□□□□ -0.53
SNRPF-205ENST00000553192 DRC7Q8IY82 874 aa11.74□□□□□ -0.53
SNRPF-205ENST00000553192 NCSTNQ92542 709 aa11.74□□□□□ -0.53
SNRPF-205ENST00000553192 INPP5DQ92835 1189 aa11.74□□□□□ -0.53
SNRPF-205ENST00000553192 AHCYL2Q96HN2 611 aaKnown RBP11.74□□□□□ -0.53
SNRPF-205ENST00000553192 C1orf74Q96LT6 269 aa11.74□□□□□ -0.53
SNRPF-205ENST00000553192 SLC38A3Q99624 504 aa11.74□□□□□ -0.53
SNRPF-205ENST00000553192 LHX9Q9NQ69 397 aa11.74□□□□□ -0.53
SNRPF-205ENST00000553192 ASNSD1Q9NWL6 643 aa11.74□□□□□ -0.53
SNRPF-205ENST00000553192 FAM13BQ9NYF5 915 aa11.74□□□□□ -0.53
SNRPF-205ENST00000553192 SERTAD1Q9UHV2 236 aa11.74□□□□□ -0.53
SNRPF-205ENST00000553192 PADI1Q9ULC6 663 aa11.74□□□□□ -0.53
SNRPF-205ENST00000553192 MAPK8IP1Q9UQF2 711 aa11.74□□□□□ -0.53
SNRPF-205ENST00000553192 MFHAS1Q9Y4C4 1052 aa11.74□□□□□ -0.53
SNRPF-205ENST00000553192 TRBV23OR9-2A0A075B6M9 112 aa11.73□□□□□ -0.53
SNRPF-205ENST00000553192 C21orf140B9A014 251 aa11.73□□□□□ -0.53
SNRPF-205ENST00000553192 PRICKLE3O43900 615 aaPredicted RBP11.73□□□□□ -0.53
SNRPF-205ENST00000553192 STX10O60499 249 aa11.73□□□□□ -0.53
SNRPF-205ENST00000553192 HSF2BPO75031 334 aa11.73□□□□□ -0.53
SNRPF-205ENST00000553192 NDUFA10O95299 355 aa11.73□□□□□ -0.53
SNRPF-205ENST00000553192 PIGNO95427 931 aa11.73□□□□□ -0.53
SNRPF-205ENST00000553192 RPL13P26373 211 aaKnown RBP11.73□□□□□ -0.53
SNRPF-205ENST00000553192 CLCN1P35523 988 aa11.73□□□□□ -0.53
SNRPF-205ENST00000553192 GNPDA1P46926 289 aa11.73□□□□□ -0.53
SNRPF-205ENST00000553192 SH3BP2P78314 561 aa11.73□□□□□ -0.53
SNRPF-205ENST00000553192 RALGDSQ12967 914 aa11.73□□□□□ -0.53
SNRPF-205ENST00000553192 STK38Q15208 465 aa11.73□□□□□ -0.53
SNRPF-205ENST00000553192 BRMS1LQ5PSV4 323 aa11.73□□□□□ -0.53
SNRPF-205ENST00000553192 LRRC31Q6UY01 552 aa11.73□□□□□ -0.53
SNRPF-205ENST00000553192 ST6GALNAC3Q8NDV1 305 aa11.73□□□□□ -0.53
SNRPF-205ENST00000553192 SLC37A2Q8TED4 501 aa11.73□□□□□ -0.53
SNRPF-205ENST00000553192 GDAP1L1Q96MZ0 367 aa11.73□□□□□ -0.53
SNRPF-205ENST00000553192 SMAD5Q99717 465 aaKnown RBP11.73□□□□□ -0.53
SNRPF-205ENST00000553192 FRMD8Q9BZ67 464 aaPredicted RBP11.73□□□□□ -0.53
SNRPF-205ENST00000553192 TTYH3Q9C0H2 523 aa11.73□□□□□ -0.53
SNRPF-205ENST00000553192 BRD8Q9H0E9 1235 aa11.73□□□□□ -0.53
SNRPF-205ENST00000553192 WDCPQ9H6R7 721 aa11.73□□□□□ -0.53
SNRPF-205ENST00000553192 WDR26Q9H7D7 661 aa11.73□□□□□ -0.53
SNRPF-205ENST00000553192 LATS2Q9NRM7 1088 aa11.73□□□□□ -0.53
SNRPF-205ENST00000553192 COPG2Q9UBF2 871 aa11.73□□□□□ -0.53
SNRPF-205ENST00000553192 SUFUQ9UMX1 484 aa11.73□□□□□ -0.53
SNRPF-205ENST00000553192 OSGIN2Q9Y236 505 aa11.73□□□□□ -0.53
SNRPF-205ENST00000553192 E2F3O00716 465 aa11.72□□□□□ -0.53
SNRPF-205ENST00000553192 TEX33O43247 280 aa11.72□□□□□ -0.53
SNRPF-205ENST00000553192 CUTAO60888 179 aa11.72□□□□□ -0.53
SNRPF-205ENST00000553192 SRGAP2O75044 1071 aa11.72□□□□□ -0.53
SNRPF-205ENST00000553192 TIAF1O95411 115 aa11.72□□□□□ -0.53
SNRPF-205ENST00000553192 EML2O95834 649 aa11.72□□□□□ -0.53
SNRPF-205ENST00000553192 ANKRD34CP0C6C1 535 aa11.72□□□□□ -0.53
SNRPF-205ENST00000553192 XPAP23025 273 aaPredicted RBP11.72□□□□□ -0.53
SNRPF-205ENST00000553192 ADCY8P40145 1251 aa11.72□□□□□ -0.53
SNRPF-205ENST00000553192 HDAC4P56524 1084 aa11.72□□□□□ -0.53
SNRPF-205ENST00000553192 PTK2Q05397 1052 aa11.72□□□□□ -0.53
SNRPF-205ENST00000553192 PDCLQ13371 301 aa11.72□□□□□ -0.53
SNRPF-205ENST00000553192 ART3Q13508 389 aa11.72□□□□□ -0.53
SNRPF-205ENST00000553192 DCAF17Q5H9S7 520 aaPredicted RBP11.72□□□□□ -0.53
SNRPF-205ENST00000553192 PNCKQ6P2M8 343 aa11.72□□□□□ -0.53
SNRPF-205ENST00000553192 GUF1Q8N442 669 aaKnown RBP11.72□□□□□ -0.53
SNRPF-205ENST00000553192 SFRP1Q8N474 314 aa11.72□□□□□ -0.53
SNRPF-205ENST00000553192 WDTC1Q8N5D0 677 aa11.72□□□□□ -0.53
SNRPF-205ENST00000553192 UBE2Q2Q8WVN8 375 aa11.72□□□□□ -0.53
SNRPF-205ENST00000553192 PAGE5Q96GU1 130 aa11.72□□□□□ -0.53
SNRPF-205ENST00000553192 ELMO2Q96JJ3 720 aa11.72□□□□□ -0.53
SNRPF-205ENST00000553192 CPXM1Q96SM3 734 aa11.72□□□□□ -0.53
SNRPF-205ENST00000553192 NPY6RQ99463 290 aa11.72□□□□□ -0.53
SNRPF-205ENST00000553192 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.72□□□□□ -0.53
SNRPF-205ENST00000553192 COPG1Q9Y678 874 aaKnown RBP11.72□□□□□ -0.53
SNRPF-205ENST00000553192 CFAP69A5D8W1 941 aa11.71□□□□□ -0.53
SNRPF-205ENST00000553192 ZNF185O15231 689 aa11.71□□□□□ -0.53
SNRPF-205ENST00000553192 ACTN4O43707 911 aaKnown RBP11.71□□□□□ -0.53
SNRPF-205ENST00000553192 SPAG6O75602 509 aa11.71□□□□□ -0.53
SNRPF-205ENST00000553192 TMCC1O94876 653 aa11.71□□□□□ -0.53
SNRPF-205ENST00000553192 RHOBTB3O94955 611 aa11.71□□□□□ -0.53
SNRPF-205ENST00000553192 CCNYL3P0C7X3 344 aa11.71□□□□□ -0.53
SNRPF-205ENST00000553192 MYCLP1P12525 358 aaPredicted RBP11.71□□□□□ -0.53
SNRPF-205ENST00000553192 PTPN4P29074 926 aa11.71□□□□□ -0.53
SNRPF-205ENST00000553192 ACTR1BP42025 376 aa11.71□□□□□ -0.53
SNRPF-205ENST00000553192 PPM1FP49593 454 aaPredicted RBP11.71□□□□□ -0.53
SNRPF-205ENST00000553192 GFERP55789 205 aa11.71□□□□□ -0.53
SNRPF-205ENST00000553192 ACTR1AP61163 376 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms