RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 TDRD5Q8NAT2 981 aaKnown RBP9.99□□□□□ -0.81
RAB5B-206ENST00000549505 PPP1R14CQ8TAE6 165 aa9.99□□□□□ -0.81
RAB5B-206ENST00000549505 PIH1D2Q8WWB5 315 aa9.99□□□□□ -0.81
RAB5B-206ENST00000549505 GPAMQ9HCL2 828 aa9.99□□□□□ -0.81
RAB5B-206ENST00000549505 NCKIPSDQ9NZQ3 722 aa9.99□□□□□ -0.81
RAB5B-206ENST00000549505 MARK1Q9P0L2 795 aa9.99□□□□□ -0.81
RAB5B-206ENST00000549505 ATP11BQ9Y2G3 1177 aa9.99□□□□□ -0.81
RAB5B-206ENST00000549505 RWDD3Q9Y3V2 267 aa9.99□□□□□ -0.81
RAB5B-206ENST00000549505 RAI2Q9Y5P3 530 aa9.99□□□□□ -0.81
RAB5B-206ENST00000549505 ST14Q9Y5Y6 855 aa9.99□□□□□ -0.81
RAB5B-206ENST00000549505 NUP210Q8TEM1 1887 aaPredicted RBP9.99□□□□□ -0.81
RAB5B-206ENST00000549505 ESRRAP11474 423 aaPredicted RBP9.98□□□□□ -0.81
RAB5B-206ENST00000549505 CSF2RAP15509 400 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 ZNF37AP17032 561 aaPredicted RBP9.98□□□□□ -0.81
RAB5B-206ENST00000549505 TFEBP19484 476 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 ELF1P32519 619 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 SMAD3P84022 425 aaKnown RBP9.98□□□□□ -0.81
RAB5B-206ENST00000549505 DMC1Q14565 340 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 ARL13AQ5H913 290 aaPredicted RBP9.98□□□□□ -0.81
RAB5B-206ENST00000549505 METTL2BQ6P1Q9 378 aaKnown RBP9.98□□□□□ -0.81
RAB5B-206ENST00000549505 KLC3Q6P597 504 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 ADGRG6Q86SQ4 1221 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 SDCCAG8Q86SQ7 713 aaPredicted RBP9.98□□□□□ -0.81
RAB5B-206ENST00000549505 RAVER1Q8IY67 606 aaKnown RBP9.98□□□□□ -0.81
RAB5B-206ENST00000549505 HERVK_113Q902F9 699 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 KIAA1191Q96A73 305 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 THOC1Q96FV9 657 aaKnown RBP9.98□□□□□ -0.81
RAB5B-206ENST00000549505 DNAJC1Q96KC8 554 aaKnown RBP9.98□□□□□ -0.81
RAB5B-206ENST00000549505 TBATAQ96M53 351 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 BIRC8Q96P09 236 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 ATOH8Q96SQ7 321 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 RTKNQ9BST9 563 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 CPEB1Q9BZB8 566 aaKnown RBP9.98□□□□□ -0.81
RAB5B-206ENST00000549505 RNPEPL1Q9HAU8 725 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 IL17CQ9P0M4 197 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 SH3BP1Q9Y3L3 701 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 ARL5AQ9Y689 179 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 ALPK3Q96L96 1907 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 A0A1W2PQ67 120 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 TRPC5OSA6NMA1 111 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 C2orf81A6NN90 581 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 A8MT66 165 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 WASH3PC4AMC7 463 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 STX16-NPEPL1H3BU86 382 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 STX16O14662 325 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 PRRG1O14668 218 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 PGLSO95336 258 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 HSPA4LO95757 839 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 HMGCLP35914 325 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 TRAF2Q12933 501 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 PPIGQ13427 754 aaKnown RBP eCLIP9.98□□□□□ -0.814e-7■□□□□ 11.3
RAB5B-206ENST00000549505 AARS2Q5JTZ9 985 aaKnown RBP9.98□□□□□ -0.81
RAB5B-206ENST00000549505 LYPLAL1Q5VWZ2 237 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 NAIF1Q69YI7 327 aaPredicted RBP9.98□□□□□ -0.81
RAB5B-206ENST00000549505 RAPH1Q70E73 1250 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 TMC7Q7Z402 723 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 KIF2BQ8N4N8 673 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 CMTM5Q96DZ9 223 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 ATXN3LQ9H3M9 355 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 GSTO2Q9H4Y5 243 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 SYTL2Q9HCH5 934 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 VPS51Q9UID3 782 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 HS3ST2Q9Y278 367 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 INSL6Q9Y581 213 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 SPECC1L-ADORA2AF8WAN1 911 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 GOLGA8TH3BQL2 631 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 GJB3O75712 270 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 ADH1AP07327 375 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 MBL2P11226 248 aaPredicted RBP9.98□□□□□ -0.81
RAB5B-206ENST00000549505 PRAMEP78395 509 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 ZBTB16Q05516 673 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 ITKQ08881 620 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 SEPT6Q14141 434 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 CERS6Q6ZMG9 384 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 STK40Q8N2I9 435 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 MAPK15Q8TD08 544 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 HCAR2Q8TDS4 363 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 ANKRD49Q8WVL7 239 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 SLC22A12Q96S37 553 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 EML4Q9HC35 981 aaKnown RBP9.98□□□□□ -0.81
RAB5B-206ENST00000549505 KIAA1522Q9P206 1035 aaPredicted RBP9.98□□□□□ -0.81
RAB5B-206ENST00000549505 NFKBIL1Q9UBC1 381 aaPredicted RBP9.98□□□□□ -0.81
RAB5B-206ENST00000549505 LSM7Q9UK45 103 aaKnown RBP9.98□□□□□ -0.81
RAB5B-206ENST00000549505 SARDHQ9UL12 918 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 KCTD3Q9Y597 815 aa9.98□□□□□ -0.81
RAB5B-206ENST00000549505 TRAV19A0A0A6YYK7 116 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 GOLGA8QA0A0J9YX86 632 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 TSPAN11A1L157 253 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 GOLGA8OA6NCC3 632 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 C2orf71A6NGG8 1288 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 GOLGA8NF8WBI6 632 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 TBL1XO60907 577 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 MOSPD3O75425 235 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 UPP2O95045 317 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 HNRNPA1P09651 372 aaKnown RBP eCLIP9.97□□□□□ -0.81
RAB5B-206ENST00000549505 MTHFD2P13995 350 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 GM2AP17900 193 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 GMPRP36959 345 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 PTGER3P43115 390 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 TTPAP49638 278 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms