RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 NME1P15531 152 aaKnown RBP18.74■□□□□ 0.59
PRPF40B-206ENST00000547764 NFKB1P19838 968 aa18.74■□□□□ 0.59
PRPF40B-206ENST00000547764 DGKAP23743 735 aa18.74■□□□□ 0.59
PRPF40B-206ENST00000547764 PTSQ03393 145 aa18.74■□□□□ 0.59
PRPF40B-206ENST00000547764 SLC14A2Q15849 920 aa18.74■□□□□ 0.59
PRPF40B-206ENST00000547764 PCSK7Q16549 785 aa18.74■□□□□ 0.59
PRPF40B-206ENST00000547764 MACC1Q6ZN28 852 aa18.74■□□□□ 0.59
PRPF40B-206ENST00000547764 Q6ZVL8 140 aa18.74■□□□□ 0.59
PRPF40B-206ENST00000547764 KDELC2Q7Z4H8 507 aa18.74■□□□□ 0.59
PRPF40B-206ENST00000547764 GLRX5Q86SX6 157 aa18.74■□□□□ 0.59
PRPF40B-206ENST00000547764 PELI3Q8N2H9 469 aa18.74■□□□□ 0.59
PRPF40B-206ENST00000547764 SLC25A45Q8N413 288 aa18.74■□□□□ 0.59
PRPF40B-206ENST00000547764 EID2Q8N6I1 236 aa18.74■□□□□ 0.59
PRPF40B-206ENST00000547764 UBE2Q2Q8WVN8 375 aa18.74■□□□□ 0.59
PRPF40B-206ENST00000547764 DTD2Q96FN9 168 aa18.74■□□□□ 0.59
PRPF40B-206ENST00000547764 LYSMD1Q96S90 227 aa18.74■□□□□ 0.59
PRPF40B-206ENST00000547764 ADGRE3Q9BY15 652 aa18.74■□□□□ 0.59
PRPF40B-206ENST00000547764 UCKL1Q9NWZ5 548 aa18.74■□□□□ 0.59
PRPF40B-206ENST00000547764 UBP1Q9NZI7 540 aa18.74■□□□□ 0.59
PRPF40B-206ENST00000547764 PNMA8BQ9ULN7 279 aaPredicted RBP18.74■□□□□ 0.59
PRPF40B-206ENST00000547764 PMPCBO75439 489 aa18.73■□□□□ 0.59
PRPF40B-206ENST00000547764 ZNF30P17039 623 aa18.73■□□□□ 0.59
PRPF40B-206ENST00000547764 HNRNPKP61978 463 aaKnown RBP eCLIP18.73■□□□□ 0.591e-6■■■■□ 23
PRPF40B-206ENST00000547764 CDK18Q07002 472 aa18.73■□□□□ 0.59
PRPF40B-206ENST00000547764 KLF1Q13351 362 aaPredicted RBP18.73■□□□□ 0.59
PRPF40B-206ENST00000547764 GALNT3Q14435 633 aa18.73■□□□□ 0.59
PRPF40B-206ENST00000547764 NFATC4Q14934 902 aa18.73■□□□□ 0.59
PRPF40B-206ENST00000547764 MEI1Q5TIA1 1274 aa18.73■□□□□ 0.59
PRPF40B-206ENST00000547764 ESRP1Q6NXG1 681 aaKnown RBP18.73■□□□□ 0.59
PRPF40B-206ENST00000547764 PNCKQ6P2M8 343 aa18.73■□□□□ 0.59
PRPF40B-206ENST00000547764 RFLNAQ6ZTI6 216 aa18.73■□□□□ 0.59
PRPF40B-206ENST00000547764 TECPR1Q7Z6L1 1165 aa18.73■□□□□ 0.59
PRPF40B-206ENST00000547764 CDKL3Q8IVW4 592 aaPredicted RBP18.73■□□□□ 0.59
PRPF40B-206ENST00000547764 ALS2CR12Q96Q35 445 aa18.73■□□□□ 0.59
PRPF40B-206ENST00000547764 MLPHQ9BV36 600 aaPredicted RBP18.73■□□□□ 0.59
PRPF40B-206ENST00000547764 KCTD5Q9NXV2 234 aa18.73■□□□□ 0.59
PRPF40B-206ENST00000547764 TRHDEQ9UKU6 1024 aa18.73■□□□□ 0.59
PRPF40B-206ENST00000547764 DNPEPQ9ULA0 475 aa18.73■□□□□ 0.59
PRPF40B-206ENST00000547764 ARID1BQ8NFD5 2236 aaPredicted RBP18.73■□□□□ 0.59
PRPF40B-206ENST00000547764 TCRBV7S2A1N4TA0A589 114 aa18.72■□□□□ 0.59
PRPF40B-206ENST00000547764 GOLGA6L9A6NEM1 432 aa18.72■□□□□ 0.59
PRPF40B-206ENST00000547764 F5H423 210 aaPredicted RBP18.72■□□□□ 0.59
PRPF40B-206ENST00000547764 K7ESM1 405 aa18.72■□□□□ 0.59
PRPF40B-206ENST00000547764 CLDN7O95471 211 aa18.72■□□□□ 0.59
PRPF40B-206ENST00000547764 C1SP09871 688 aa18.72■□□□□ 0.59
PRPF40B-206ENST00000547764 JUNDP17535 347 aa18.72■□□□□ 0.59
PRPF40B-206ENST00000547764 TRIM23P36406 574 aa18.72■□□□□ 0.59
PRPF40B-206ENST00000547764 RPS6KA1Q15418 735 aa18.72■□□□□ 0.59
PRPF40B-206ENST00000547764 CDKN3Q16667 212 aa18.72■□□□□ 0.59
PRPF40B-206ENST00000547764 DARS2Q6PI48 645 aaKnown RBP18.72■□□□□ 0.59
PRPF40B-206ENST00000547764 TTC13Q8NBP0 860 aa18.72■□□□□ 0.59
PRPF40B-206ENST00000547764 FUBP1Q96AE4 644 aaKnown RBP18.72■□□□□ 0.59
PRPF40B-206ENST00000547764 FCRL5Q96RD9 977 aa18.72■□□□□ 0.59
PRPF40B-206ENST00000547764 FERMT1Q9BQL6 677 aa18.72■□□□□ 0.59
PRPF40B-206ENST00000547764 FTSJ1Q9UET6 329 aa18.72■□□□□ 0.59
PRPF40B-206ENST00000547764 FAM153AQ9UHL3 310 aa18.72■□□□□ 0.59
PRPF40B-206ENST00000547764 C1orf232A0A0U1RR37 186 aa18.71■□□□□ 0.59
PRPF40B-206ENST00000547764 H3BM21 787 aa18.71■□□□□ 0.59
PRPF40B-206ENST00000547764 KCNN4O15554 427 aa18.71■□□□□ 0.59
PRPF40B-206ENST00000547764 TNFSF14O43557 240 aa18.71■□□□□ 0.59
PRPF40B-206ENST00000547764 ATXN1LP0C7T5 689 aaKnown RBP18.71■□□□□ 0.59
PRPF40B-206ENST00000547764 HTR1BP28222 390 aa18.71■□□□□ 0.59
PRPF40B-206ENST00000547764 STC1P52823 247 aa18.71■□□□□ 0.59
PRPF40B-206ENST00000547764 KDELC1Q6UW63 502 aa18.71■□□□□ 0.59
PRPF40B-206ENST00000547764 ENPP7Q6UWV6 458 aa18.71■□□□□ 0.59
PRPF40B-206ENST00000547764 NYAP1Q6ZVC0 841 aa18.71■□□□□ 0.59
PRPF40B-206ENST00000547764 RBFAQ8N0V3 343 aa18.71■□□□□ 0.59
PRPF40B-206ENST00000547764 ZNF548Q8NEK5 533 aaPredicted RBP18.71■□□□□ 0.59
PRPF40B-206ENST00000547764 ANP32BQ92688 251 aaKnown RBP18.71■□□□□ 0.59
PRPF40B-206ENST00000547764 OXNAD1Q96HP4 312 aaPredicted RBP18.71■□□□□ 0.59
PRPF40B-206ENST00000547764 TCEAL2Q9H3H9 227 aaPredicted RBP18.71■□□□□ 0.59
PRPF40B-206ENST00000547764 USP29Q9HBJ7 922 aa18.71■□□□□ 0.59
PRPF40B-206ENST00000547764 RSPH14Q9UHP6 348 aa18.71■□□□□ 0.59
PRPF40B-206ENST00000547764 CD84Q9UIB8 345 aa18.71■□□□□ 0.59
PRPF40B-206ENST00000547764 R3HDM2Q9Y2K5 976 aaKnown RBP18.71■□□□□ 0.59
PRPF40B-206ENST00000547764 CACNB4O00305 520 aaPredicted RBP18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 TRIM38O00635 465 aa18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 FFAR2O15552 330 aa18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 LDOC1O95751 146 aaPredicted RBP18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 NDST3O95803 873 aa18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 HOXC4P09017 264 aaPredicted RBP18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 FTH1P19P0C7X4 201 aa18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 GIMD1P0DJR0 217 aa18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 TSHRP16473 764 aa18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 PMLP29590 882 aa18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 WNT3AP56704 352 aa18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 KIAA1024LP59773 190 aa18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 PPARDQ03181 441 aa18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 SEL1L2Q5TEA6 688 aa18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 FAXCQ5TGI0 409 aa18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 SLCO6A1Q86UG4 719 aa18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 PHACTR4Q8IZ21 702 aa18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 TRIM58Q8NG06 486 aa18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 BTN2A2Q8WVV5 523 aa18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 SCAMP4Q969E2 229 aa18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 TSACCQ96A04 125 aaPredicted RBP18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 CNDP2Q96KP4 475 aaKnown RBP18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 WDR92Q96MX6 357 aa18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 LGR4Q9BXB1 951 aa18.7■□□□□ 0.58
PRPF40B-206ENST00000547764 ABCG8Q9H221 673 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms