RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 ZDHHC6Q9H6R6 413 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 WDFY3Q8IZQ1 3526 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 CHD5Q8TDI0 1954 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 ATP6AP2A0A1C7CYW4 349 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 TYW5A2RUC4 315 aaKnown RBP11.98□□□□□ -0.49
CCDC38-202ENST00000546386 PLK4O00444 970 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 TIMM44O43615 452 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 DLX3O60479 287 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 NIPSNAP2O75323 286 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 SKAP2O75563 359 aaPredicted RBP11.98□□□□□ -0.49
CCDC38-202ENST00000546386 ATP6AP2O75787 350 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 HSPA4LO95757 839 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 PAMP19021 973 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 HTR7P34969 479 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 METAP1P53582 386 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 ARL13AQ5H913 290 aaPredicted RBP11.98□□□□□ -0.49
CCDC38-202ENST00000546386 KLHDC10Q6PID8 442 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 Q6ZNB5 142 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 CYS1Q717R9 158 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 OR4L1Q8NH43 312 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 ALG14Q96F25 216 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 EMILIN2Q9BXX0 1053 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 KDM4CQ9H3R0 1056 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 LHX3Q9UBR4 397 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 LSM7Q9UK45 103 aaKnown RBP11.98□□□□□ -0.49
CCDC38-202ENST00000546386 IKZF3Q9UKT9 509 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 PTGDR2Q9Y5Y4 395 aa11.98□□□□□ -0.49
CCDC38-202ENST00000546386 SRRM3A6NNA2 597 aaPredicted RBP11.97□□□□□ -0.49
CCDC38-202ENST00000546386 H3BMM5 538 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 NDST3O95803 873 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 MC4RP32245 332 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 MAGEA9P43362 315 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 SLC18A1P54219 525 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 CREB5Q02930 508 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 NSUN2Q08J23 767 aaKnown RBP eCLIP11.97□□□□□ -0.49
CCDC38-202ENST00000546386 SLC9B1Q4ZJI4 515 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 TMEM215Q68D42 235 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 TIFABQ6ZNK6 161 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 CLPTM1LQ96KA5 538 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 GCNAQ96QF7 691 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 MCMBPQ9BTE3 642 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 GPR63Q9BZJ6 419 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 RASSF4Q9H2L5 321 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 EBF3Q9H4W6 596 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 TDP1Q9NUW8 608 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 CIDEBQ9UHD4 219 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 BAIAP2L1Q9UHR4 511 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 SLC12A4Q9UP95 1085 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 YBX2Q9Y2T7 364 aaKnown RBP11.97□□□□□ -0.49
CCDC38-202ENST00000546386 VWA7Q9Y334 891 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 OR51B4Q9Y5P0 310 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 KIAA1671Q9BY89 1806 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 C1orf232A0A0U1RR37 186 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 EPOPA6NHQ4 379 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 FCHO1O14526 889 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 BAIAP3O94812 1187 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 SORBS2O94875 1100 aaKnown RBP11.97□□□□□ -0.49
CCDC38-202ENST00000546386 UGT2B4P06133 528 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 TYRP14679 529 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 CR2P20023 1033 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 BNIP1Q12981 228 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 FUT11Q495W5 492 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 LRRC8EQ6NSJ5 796 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 SETD3Q86TU7 594 aaPredicted RBP11.97□□□□□ -0.49
CCDC38-202ENST00000546386 LRRC49Q8IUZ0 686 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 BBS5Q8N3I7 341 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 SIDT2Q8NBJ9 832 aaKnown RBP11.97□□□□□ -0.49
CCDC38-202ENST00000546386 TXNDC5Q8NBS9 432 aaKnown RBP11.97□□□□□ -0.49
CCDC38-202ENST00000546386 HJURPQ8NCD3 748 aaPredicted RBP11.97□□□□□ -0.49
CCDC38-202ENST00000546386 BRSK1Q8TDC3 778 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 GIMAP2Q9UG22 337 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 ZDHHC2Q9UIJ5 367 aa11.97□□□□□ -0.49
CCDC38-202ENST00000546386 PRR5-ARHGAP8B1AHC4 643 aa11.96□□□□□ -0.49
CCDC38-202ENST00000546386 PSMD3O43242 534 aa11.96□□□□□ -0.49
CCDC38-202ENST00000546386 ZNF821O75541 412 aaPredicted RBP11.96□□□□□ -0.49
CCDC38-202ENST00000546386 TFEBP19484 476 aa11.96□□□□□ -0.49
CCDC38-202ENST00000546386 CNTFP26441 200 aa11.96□□□□□ -0.49
CCDC38-202ENST00000546386 ARHGAP8P85298 464 aa11.96□□□□□ -0.49
CCDC38-202ENST00000546386 SLC12A1Q13621 1099 aa11.96□□□□□ -0.49
CCDC38-202ENST00000546386 GEN1Q17RS7 908 aa11.96□□□□□ -0.49
CCDC38-202ENST00000546386 PLEKHG6Q3KR16 790 aa11.96□□□□□ -0.49
CCDC38-202ENST00000546386 ATG16L1Q676U5 607 aa11.96□□□□□ -0.49
CCDC38-202ENST00000546386 NXNQ6DKJ4 435 aa11.96□□□□□ -0.49
CCDC38-202ENST00000546386 CLEC6AQ6EIG7 209 aa11.96□□□□□ -0.49
CCDC38-202ENST00000546386 KIAA0930Q6ICG6 404 aaPredicted RBP11.96□□□□□ -0.49
CCDC38-202ENST00000546386 PAQR3Q6TCH7 311 aa11.96□□□□□ -0.49
CCDC38-202ENST00000546386 KYAT3Q6YP21 454 aaKnown RBP11.96□□□□□ -0.49
CCDC38-202ENST00000546386 DET1Q7L5Y6 550 aa11.96□□□□□ -0.49
CCDC38-202ENST00000546386 C12orf40Q86WS4 652 aa11.96□□□□□ -0.49
CCDC38-202ENST00000546386 PTERQ96BW5 349 aa11.96□□□□□ -0.49
CCDC38-202ENST00000546386 RSPRY1Q96DX4 576 aa11.96□□□□□ -0.49
CCDC38-202ENST00000546386 OR52B2Q96RD2 323 aa11.96□□□□□ -0.49
CCDC38-202ENST00000546386 POMKQ9H5K3 350 aa11.96□□□□□ -0.49
CCDC38-202ENST00000546386 ARNT2Q9HBZ2 717 aa11.96□□□□□ -0.49
CCDC38-202ENST00000546386 CATSPERZQ9NTU4 200 aa11.96□□□□□ -0.49
CCDC38-202ENST00000546386 FNIP2Q9P278 1114 aa11.96□□□□□ -0.49
CCDC38-202ENST00000546386 MBD1Q9UIS9 605 aaPredicted RBP11.96□□□□□ -0.49
CCDC38-202ENST00000546386 MRPS23Q9Y3D9 190 aaKnown RBP11.96□□□□□ -0.49
CCDC38-202ENST00000546386 A0A1B0GTL3 188 aa11.96□□□□□ -0.5
CCDC38-202ENST00000546386 STX7O15400 261 aaKnown RBP11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms