RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 RGRP47804 291 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 ATP5OP48047 213 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 LIG3P49916 1009 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 RENBPP51606 427 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 COPAP53621 1224 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 AP1S1P61966 158 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 SNRPD1P62314 119 aaKnown RBP6.4□□□□□ -1.38
PRKDC-211ENST00000546304 HNRNPDQ14103 355 aaKnown RBP6.4□□□□□ -1.38
PRKDC-211ENST00000546304 CYTH1Q15438 398 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 SIX1Q15475 284 aaPredicted RBP6.4□□□□□ -1.38
PRKDC-211ENST00000546304 CST6Q15828 149 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 LONRF2Q1L5Z9 754 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 TTC31Q49AM3 519 aaPredicted RBP6.4□□□□□ -1.38
PRKDC-211ENST00000546304 MARC1Q5VT66 337 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 KIAA1324Q6UXG2 1013 aaKnown RBP6.4□□□□□ -1.38
PRKDC-211ENST00000546304 DPY19L3Q6ZPD9 716 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 B4GALNT4Q76KP1 1039 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 RASSF3Q86WH2 238 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 C1orf210Q8IVY1 113 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 STK40Q8N2I9 435 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 RASGEF1CQ8N431 466 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 RYBPQ8N488 228 aaPredicted RBP6.4□□□□□ -1.38
PRKDC-211ENST00000546304 TEX26Q8N6G2 289 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 CHST14Q8NCH0 376 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 SLC35B2Q8TB61 432 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 ACTRT1Q8TDG2 376 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 MAIP1Q8WWC4 291 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 HTR3CQ8WXA8 447 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 PTPRN2Q92932 1015 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 NKD2Q969F2 451 aaPredicted RBP6.4□□□□□ -1.38
PRKDC-211ENST00000546304 PLPPR2Q96GM1 343 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 MS4A14Q96JA4 679 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 MRGPRX1Q96LB2 322 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 NAP1L3Q99457 506 aaPredicted RBP6.4□□□□□ -1.38
PRKDC-211ENST00000546304 FERMT1Q9BQL6 677 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 LRFN3Q9BTN0 628 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 FRMD8P1Q9BZ68 369 aaPredicted RBP6.4□□□□□ -1.38
PRKDC-211ENST00000546304 POLR1EQ9GZS1 481 aaKnown RBP6.4□□□□□ -1.38
PRKDC-211ENST00000546304 SLC6A17Q9H1V8 727 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 RSPH9Q9H1X1 276 aaPredicted RBP6.4□□□□□ -1.38
PRKDC-211ENST00000546304 ZDHHC6Q9H6R6 413 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 NT5MQ9NPB1 228 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 SMARCAL1Q9NZC9 954 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 SUN2Q9UH99 717 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 AMACRQ9UHK6 382 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 ADGRE2Q9UHX3 823 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 TTC7AQ9ULT0 858 aaPredicted RBP6.4□□□□□ -1.38
PRKDC-211ENST00000546304 SAR1BQ9Y6B6 198 aa6.4□□□□□ -1.38
PRKDC-211ENST00000546304 RIF1Q5UIP0 2472 aaKnown RBP6.4□□□□□ -1.39
PRKDC-211ENST00000546304 DOCK9Q9BZ29 2069 aa6.4□□□□□ -1.39
PRKDC-211ENST00000546304 GVINP1Q7Z2Y8 2422 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 PLXNA2O75051 1894 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 BCLAF3A2AJT9 711 aaKnown RBP6.39□□□□□ -1.39
PRKDC-211ENST00000546304 CFAP69A5D8W1 941 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 KPNA3O00505 521 aaPredicted RBP6.39□□□□□ -1.39
PRKDC-211ENST00000546304 KRIT1O00522 736 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 MID1O15344 667 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 KCNN4O15554 427 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 OPHN1O60890 802 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 RNASEH1O60930 286 aaKnown RBP6.39□□□□□ -1.39
PRKDC-211ENST00000546304 GJB3O75712 270 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 STK10O94804 968 aaKnown RBP6.39□□□□□ -1.39
PRKDC-211ENST00000546304 PIGNO95427 931 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 IL1BP01584 269 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 JCHAINP01591 159 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 UGT2B4P06133 528 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 CTSLP07711 333 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 PRLRP16471 622 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 CR2P20023 1033 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 RBL1P28749 1068 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 SERPINA4P29622 427 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 HOXA6P31267 233 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 GKP32189 559 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 CHRNA3P32297 505 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 DEKP35659 375 aaKnown RBP6.39□□□□□ -1.39
PRKDC-211ENST00000546304 PI4KAP42356 2102 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 PXNP49023 591 aaPredicted RBP6.39□□□□□ -1.39
PRKDC-211ENST00000546304 METAP1P53582 386 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 MAXP61244 160 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 ZBTB16Q05516 673 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 WASHC5Q12768 1159 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 BYSLQ13895 437 aaKnown RBP6.39□□□□□ -1.39
PRKDC-211ENST00000546304 ANGPT1Q15389 498 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 OASLQ15646 514 aaKnown RBP6.39□□□□□ -1.39
PRKDC-211ENST00000546304 POM121L1PQ3SYA9 428 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 CARD16Q5EG05 197 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 RALGPS1Q5JS13 557 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 DARS2Q6PI48 645 aaKnown RBP6.39□□□□□ -1.39
PRKDC-211ENST00000546304 TSSK4Q6SA08 328 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 FAM214BQ7L5A3 538 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 UBE3DQ7Z6J8 389 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 TMPRSS6Q8IU80 811 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 MMAAQ8IVH4 418 aaKnown RBP6.39□□□□□ -1.39
PRKDC-211ENST00000546304 MAML2Q8IZL2 1156 aaPredicted RBP6.39□□□□□ -1.39
PRKDC-211ENST00000546304 PGBD5Q8N414 524 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 CAMKK1Q8N5S9 505 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 PRELID2Q8N945 189 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 PIP4K2CQ8TBX8 421 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 NETO1Q8TDF5 533 aa6.39□□□□□ -1.39
PRKDC-211ENST00000546304 C1orf54Q8WWF1 131 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms