RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 GEN1Q17RS7 908 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 CCDC117Q8IWD4 279 aaPredicted RBP13.69□□□□□ -0.22
HCFC2-202ENST00000544223 FAM167BQ9BTA0 163 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 ZDHHC6Q9H6R6 413 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 SPHK2Q9NRA0 654 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 CATSPERZQ9NTU4 200 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 HEY2Q9UBP5 337 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 DNAJC16Q9Y2G8 782 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 LATS1O95835 1130 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 CYBBP04839 570 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 TSPAN8P19075 237 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 PMLP29590 882 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 SLC12A2P55011 1212 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 SLC12A1Q13621 1099 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 ZNF77Q15935 545 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 ARHGAP15Q53QZ3 475 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 TAF1BQ53T94 588 aaPredicted RBP13.69□□□□□ -0.22
HCFC2-202ENST00000544223 ZRANB3Q5FWF4 1079 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 RETSATQ6NUM9 610 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 FAM151BQ6UXP7 276 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 CPXM2Q8N436 756 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 LMLNQ96KR4 655 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 SORT1Q99523 831 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 SLC30A3Q99726 388 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 TRIM55Q9BYV6 548 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 EBF3Q9H4W6 596 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 GPAMQ9HCL2 828 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 SLC7A4O43246 635 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 SIN3BO75182 1162 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 XYLBO75191 536 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 EPOP01588 193 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 MPOP05164 745 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 ARSAP15289 507 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 MC4RP32245 332 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 PEX6Q13608 980 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 INO80DQ53TQ3 878 aaPredicted RBP13.68□□□□□ -0.22
HCFC2-202ENST00000544223 RARS2Q5T160 578 aaKnown RBP13.68□□□□□ -0.22
HCFC2-202ENST00000544223 FBXW10Q5XX13 1052 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 DPY19L3Q6ZPD9 716 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 PIH1D2Q8WWB5 315 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 MTIF3Q9H2K0 278 aaKnown RBP13.68□□□□□ -0.22
HCFC2-202ENST00000544223 HECAQ9UBI9 543 aaPredicted RBP13.68□□□□□ -0.22
HCFC2-202ENST00000544223 STK39Q9UEW8 545 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 GGA2Q9UJY4 613 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 VWA7Q9Y334 891 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 CARNS1A5YM72 827 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 TTC34A8MYJ7 566 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 SNNO75324 88 aaPredicted RBP13.68□□□□□ -0.22
HCFC2-202ENST00000544223 PAPSS2O95340 614 aaPredicted RBP13.68□□□□□ -0.22
HCFC2-202ENST00000544223 HNF1BP35680 557 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 ARFIP2P53365 341 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 NAGLUP54802 743 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 UGP2Q16851 508 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 LRRC8EQ6NSJ5 796 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 MAVSQ7Z434 540 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 ADIPOR2Q86V24 386 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 ZNF781Q8N8C0 355 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 PHF21BQ96EK2 531 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 MYO19Q96H55 970 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 ADGRE3Q9BY15 652 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 CIPCQ9C0C6 399 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 IGSF5Q9NSI5 407 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 HAUS2Q9NVX0 235 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 NLE1Q9NVX2 485 aaPredicted RBP13.68□□□□□ -0.22
HCFC2-202ENST00000544223 HAO1Q9UJM8 370 aa13.68□□□□□ -0.22
HCFC2-202ENST00000544223 C1orf232A0A0U1RR37 186 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 C2orf81A6NN90 581 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 TRAFD1O14545 582 aaPredicted RBP13.67□□□□□ -0.22
HCFC2-202ENST00000544223 DLX3O60479 287 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 CRTAMO95727 393 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 UGT2B4P06133 528 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 TROVE2P10155 538 aaKnown RBP eCLIP13.67□□□□□ -0.22
HCFC2-202ENST00000544223 UGT1A6P19224 532 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 UGT1A1P22309 533 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 UGT1A4P22310 534 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 UGT1A3P35503 534 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 UGT1A5P35504 534 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 BCL2L1Q07817 233 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 PPP2R2DQ66LE6 453 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 GET4Q7L5D6 327 aaPredicted RBP13.67□□□□□ -0.22
HCFC2-202ENST00000544223 TAS2R42Q7RTR8 314 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 CCNYL1Q8N7R7 359 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 LRRC37BQ96QE4 947 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 GATA5Q9BWX5 397 aaPredicted RBP13.67□□□□□ -0.22
HCFC2-202ENST00000544223 GPR63Q9BZJ6 419 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 ALG9Q9H6U8 611 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 ECT2Q9H8V3 914 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 IKZF3Q9UKT9 509 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 TMEM233B4DJY2 109 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 STX7O15400 261 aaKnown RBP13.67□□□□□ -0.22
HCFC2-202ENST00000544223 FZD6O60353 706 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 PGLSO95336 258 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 CD1EP15812 388 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 ITGB6P18564 788 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 HADHAP40939 763 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 SLC6A11P48066 632 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 KCNJ2P63252 427 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 TAF1AQ15573 450 aaPredicted RBP13.67□□□□□ -0.22
HCFC2-202ENST00000544223 FAM78AQ5JUQ0 283 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 ARMC12Q5T9G4 340 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms