RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 ANKRD36A6QL64 1941 aa13.75□□□□□ -0.21
VPS33A-208ENST00000543633 A0A0J9YYE9 177 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 KANSL1LA0AUZ9 987 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 TTC24A2A3L6 582 aaPredicted RBP13.74□□□□□ -0.21
VPS33A-208ENST00000543633 PMPCBO75439 489 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 ALDOCP09972 364 aaKnown RBP13.74□□□□□ -0.21
VPS33A-208ENST00000543633 TNK2Q07912 1038 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 MERTKQ12866 999 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 GRIK2Q13002 908 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 SLC36A3Q495N2 470 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 UNC50Q53HI1 259 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 PTAR1Q7Z6K3 402 aaPredicted RBP13.74□□□□□ -0.21
VPS33A-208ENST00000543633 GPR180Q86V85 440 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 RTL3Q8N8U3 475 aaKnown RBP13.74□□□□□ -0.21
VPS33A-208ENST00000543633 DNAJB3Q8WWF6 145 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 PEX13Q92968 403 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 TMIGD2Q96BF3 282 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 MYRFLQ96LU7 910 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 TRIM54Q9BYV2 358 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 SMOC2Q9H3U7 446 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 HIPK3Q9H422 1215 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 SH3PXD2BA1X283 911 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 TYW5A2RUC4 315 aaKnown RBP13.74□□□□□ -0.21
VPS33A-208ENST00000543633 DLGAP1O14490 977 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 UBFD1O14562 309 aaKnown RBP13.74□□□□□ -0.21
VPS33A-208ENST00000543633 AURKAO14965 403 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 RASAL1O95294 804 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 UMPSP11172 480 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 HDCP19113 662 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 CCR1P32246 355 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 RPL9P32969 192 aaKnown RBP13.74□□□□□ -0.21
VPS33A-208ENST00000543633 CHRNA4P43681 627 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 MFSD10Q14728 455 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 ARTNQ5T4W7 220 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 TTC33Q6PID6 262 aaPredicted RBP13.74□□□□□ -0.21
VPS33A-208ENST00000543633 RAB44Q7Z6P3 723 aaPredicted RBP13.74□□□□□ -0.21
VPS33A-208ENST00000543633 SAPCD2Q86UD0 394 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 RETREG3Q86VR2 466 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 EPHX4Q8IUS5 362 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 PNPT1Q8TCS8 783 aaKnown RBP13.74□□□□□ -0.21
VPS33A-208ENST00000543633 MYLPFQ96A32 169 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 ISOC1Q96CN7 298 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 IMP4Q96G21 291 aaKnown RBP13.74□□□□□ -0.21
VPS33A-208ENST00000543633 TMEM45AQ9NWC5 275 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 SMOXQ9NWM0 555 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 TMEM9Q9P0T7 183 aa13.74□□□□□ -0.21
VPS33A-208ENST00000543633 MROH6A6NGR9 719 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 FXYD1O00168 92 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 HAS3O00219 553 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 PLOD2O00469 737 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 ANGPT2O15123 496 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 SNAP91O60641 907 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 SUPT7LO94864 414 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 CKMT2P17540 419 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 PAX3P23760 479 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 YWHAQP27348 245 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 CCT8P50990 548 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 SUOXP51687 545 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 GRB14Q14449 540 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 KIF19Q2TAC6 998 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 KANK2Q63ZY3 851 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 TWF2Q6IBS0 349 aaKnown RBP13.73□□□□□ -0.21
VPS33A-208ENST00000543633 ZNF280DQ6N043 979 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 FAM171BQ6P995 826 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 ISCA2Q86U28 154 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 PTRH1Q86Y79 214 aaKnown RBP13.73□□□□□ -0.21
VPS33A-208ENST00000543633 RASAL3Q86YV0 1011 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 CBR4Q8N4T8 237 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 LEMD2Q8NC56 503 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 PAPD5Q8NDF8 572 aaKnown RBP13.73□□□□□ -0.21
VPS33A-208ENST00000543633 OR9I1Q8NGQ6 314 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 RHEBL1Q8TAI7 183 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 PHF21BQ96EK2 531 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 UNKQ9C0B0 810 aaKnown RBP13.73□□□□□ -0.21
VPS33A-208ENST00000543633 AKTIPQ9H8T0 292 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 SDR39U1Q9NRG7 319 aaPredicted RBP13.73□□□□□ -0.21
VPS33A-208ENST00000543633 ABCC13Q9NSE7 274 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 MAP10Q9P2G4 905 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 FAF1Q9UNN5 650 aaPredicted RBP13.73□□□□□ -0.21
VPS33A-208ENST00000543633 TRIM64BA6NI03 449 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 NR5A2O00482 541 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 PAGE1O75459 146 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 ODC1P11926 461 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 IDO1P14902 403 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 FDXRP22570 491 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 DCKP27707 260 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 GALK1P51570 392 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 RENBPP51606 427 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 PLOD1Q02809 727 aaPredicted RBP13.73□□□□□ -0.21
VPS33A-208ENST00000543633 OGFOD2Q6N063 350 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 KLHL35Q6PF15 583 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 ZNF554Q86TJ5 538 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 RNF135Q8IUD6 432 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 PHYKPLQ8IUZ5 450 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 SLC15A3Q8IY34 581 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 ADGRG5Q8IZF4 528 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 TRPV3Q8NET8 790 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 OR13J1Q8NGT2 312 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 ANKRD49Q8WVL7 239 aa13.73□□□□□ -0.21
VPS33A-208ENST00000543633 TUBA1CQ9BQE3 449 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms