RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 TADA1Q96BN2 335 aa6.32□□□□□ -1.4
LTBR-212ENST00000543542 AP2M1Q96CW1 435 aa6.32□□□□□ -1.4
LTBR-212ENST00000543542 FAM122AQ96E09 287 aa6.32□□□□□ -1.4
LTBR-212ENST00000543542 KLHDC7BQ96G42 594 aa6.32□□□□□ -1.4
LTBR-212ENST00000543542 MCCC1Q96RQ3 725 aaPredicted RBP6.32□□□□□ -1.4
LTBR-212ENST00000543542 TRIB3Q96RU7 358 aa6.32□□□□□ -1.4
LTBR-212ENST00000543542 PHOX2BQ99453 314 aa6.32□□□□□ -1.4
LTBR-212ENST00000543542 GTPBP2Q9BX10 602 aaKnown RBP6.32□□□□□ -1.4
LTBR-212ENST00000543542 TRIM31Q9BZY9 425 aa6.32□□□□□ -1.4
LTBR-212ENST00000543542 SMOC1Q9H4F8 434 aa6.32□□□□□ -1.4
LTBR-212ENST00000543542 TRABDQ9H4I3 376 aa6.32□□□□□ -1.4
LTBR-212ENST00000543542 MAGEE1Q9HCI5 957 aa6.32□□□□□ -1.4
LTBR-212ENST00000543542 TM9SF3Q9HD45 589 aa6.32□□□□□ -1.4
LTBR-212ENST00000543542 BPIFA1Q9NP55 256 aa6.32□□□□□ -1.4
LTBR-212ENST00000543542 RAD18Q9NS91 495 aa6.32□□□□□ -1.4
LTBR-212ENST00000543542 TMEM74BQ9NUR3 256 aa6.32□□□□□ -1.4
LTBR-212ENST00000543542 PIH1D1Q9NWS0 290 aaKnown RBP6.32□□□□□ -1.4
LTBR-212ENST00000543542 KCTD5Q9NXV2 234 aa6.32□□□□□ -1.4
LTBR-212ENST00000543542 MOSPD1Q9UJG1 213 aa6.32□□□□□ -1.4
LTBR-212ENST00000543542 PILRBQ9UKJ0 227 aa6.32□□□□□ -1.4
LTBR-212ENST00000543542 SLC6A14Q9UN76 642 aa6.32□□□□□ -1.4
LTBR-212ENST00000543542 CA5BQ9Y2D0 317 aa6.32□□□□□ -1.4
LTBR-212ENST00000543542 PPIL1Q9Y3C6 166 aa6.32□□□□□ -1.4
LTBR-212ENST00000543542 PKP3Q9Y446 797 aa6.32□□□□□ -1.4
LTBR-212ENST00000543542 LRRK1Q38SD2 2015 aa6.32□□□□□ -1.4
LTBR-212ENST00000543542 ABCA7Q8IZY2 2146 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 A0A1B0GVT2 93 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 CCDC78A2IDD5 438 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 CTAGE15A4D2H0 777 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 EFCAB8A8MWE9 144 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 ESPNB1AK53 854 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 PATE3B3GLJ2 98 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 PROB1E7EW31 1015 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 GOLGA8MH3BSY2 632 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 AP3B1O00203 1094 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 CACNB4O00305 520 aaPredicted RBP6.31□□□□□ -1.4
LTBR-212ENST00000543542 NDC80O14777 642 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 STX7O15400 261 aaKnown RBP6.31□□□□□ -1.4
LTBR-212ENST00000543542 TTI1O43156 1089 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 SPINT1O43278 529 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 BUD23O43709 281 aaKnown RBP6.31□□□□□ -1.4
LTBR-212ENST00000543542 GFRA3O60609 400 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 C1SP09871 688 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 ATXN1LP0C7T5 689 aaKnown RBP6.31□□□□□ -1.4
LTBR-212ENST00000543542 CTAGE8P0CG41 777 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 THEGLP0DJG4 465 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 TPSB2P20231 275 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 LHCGRP22888 699 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 HOXD12P35452 270 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 GPR1P46091 355 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 STC1P52823 247 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 SESN2P58004 480 aaPredicted RBP6.31□□□□□ -1.4
LTBR-212ENST00000543542 RACK1P63244 317 aaKnown RBP6.31□□□□□ -1.4
LTBR-212ENST00000543542 TMPRSS15P98073 1019 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 PDE1BQ01064 536 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 PTSQ03393 145 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 LAMB3Q13751 1172 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 PTK6Q13882 451 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 PTK2BQ14289 1009 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 POU6F1Q14863 301 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 IRF4Q15306 451 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 TPSAB1Q15661 275 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 IZUMO3Q5VZ72 239 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 C8orf74Q6P047 294 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 CASC4Q6P4E1 433 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 LAYNQ6UX15 382 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 RANBP10Q6VN20 620 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 Q6ZSR6 202 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 Q6ZVL8 140 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 SYDE1Q6ZW31 735 aaPredicted RBP6.31□□□□□ -1.4
LTBR-212ENST00000543542 ASCL5Q7RTU5 278 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 CTAGE6Q86UF2 777 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 JAMLQ86YT9 394 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 CTAGE4Q8IX94 777 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 PPIL6Q8IXY8 311 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 NRSN1Q8IZ57 195 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 DCLK2Q8N568 766 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 CEP112Q8N8E3 955 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 DENND6BQ8NEG7 585 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 PPHLN1Q8NEY8 458 aaKnown RBP6.31□□□□□ -1.4
LTBR-212ENST00000543542 GDAP1Q8TB36 358 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 FAM174AQ8TBP5 190 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 ASB12Q8WXK4 309 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 SPOCK2Q92563 424 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 DTD2Q96FN9 168 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 COQ10AQ96MF6 247 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 LENG8Q96PV6 779 aaPredicted RBP6.31□□□□□ -1.4
LTBR-212ENST00000543542 GORASP1Q9BQQ3 440 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 TRIM51Q9BSJ1 452 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 SPATA16Q9BXB7 569 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 C1QTNF2Q9BXJ5 285 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 FAM83DQ9H4H8 585 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 EBF2Q9HAK2 575 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 FSCN3Q9NQT6 498 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 SEMA4GQ9NTN9 838 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.31□□□□□ -1.4
LTBR-212ENST00000543542 BFARQ9NZS9 450 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 SAMD15Q9P1V8 674 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 PCYOX1Q9UHG3 505 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 UTP11Q9Y3A2 253 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms