RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 PCED1AQ9H1Q7 454 aa23.12■■□□□ 1.29
HOMER3-205ENST00000542541 KCTD5Q9NXV2 234 aa23.12■■□□□ 1.29
HOMER3-205ENST00000542541 PKP3Q9Y446 797 aa23.12■■□□□ 1.29
HOMER3-205ENST00000542541 MAP3K13O43283 966 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 MMP20O60882 483 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 RNGTTO60942 597 aaKnown RBP23.11■■□□□ 1.29
HOMER3-205ENST00000542541 HORMAD1Q86X24 394 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 CBARPQ8N350 705 aaPredicted RBP23.11■■□□□ 1.29
HOMER3-205ENST00000542541 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.11■■□□□ 1.29
HOMER3-205ENST00000542541 FMO2Q99518 471 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 C19orf43Q9BQ61 176 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 NAT9Q9BTE0 207 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 GPR174Q9BXC1 333 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 EPC1Q9H2F5 836 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 RAD18Q9NS91 495 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 SYBUQ9NX95 663 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 PKD2L2Q9NZM6 624 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 NFU1Q9UMS0 254 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 MAD1L1Q9Y6D9 718 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 PRR23AA6NEV1 266 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 AURKAO14965 403 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 STX7O15400 261 aaKnown RBP23.11■■□□□ 1.29
HOMER3-205ENST00000542541 GALR2O43603 387 aaPredicted RBP23.11■■□□□ 1.29
HOMER3-205ENST00000542541 LDB2O43679 373 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 LZTS3O60299 673 aaPredicted RBP23.11■■□□□ 1.29
HOMER3-205ENST00000542541 TM7SF2O76062 418 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 TNFRSF8P28908 595 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 STC1P52823 247 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 DHX9Q08211 1270 aaKnown RBP23.11■■□□□ 1.29
HOMER3-205ENST00000542541 PDIA2Q13087 525 aaKnown RBP23.11■■□□□ 1.29
HOMER3-205ENST00000542541 ACOX1Q15067 660 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 TRIM69Q86WT6 500 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 CCNJLQ8IV13 435 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 TTC30BQ8N4P2 665 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 FAM160A2Q8N612 972 aaPredicted RBP23.11■■□□□ 1.29
HOMER3-205ENST00000542541 SIGLEC10Q96LC7 697 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 PWWP2AQ96N64 755 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 INVSQ9Y283 1065 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 TCAF1Q9Y4C2 921 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 ARL5AQ9Y689 179 aa23.11■■□□□ 1.29
HOMER3-205ENST00000542541 A0A1W2PQU0 124 aa23.1■■□□□ 1.29
HOMER3-205ENST00000542541 RGSL1A5PLK6 1076 aa23.1■■□□□ 1.29
HOMER3-205ENST00000542541 MROH6A6NGR9 719 aa23.1■■□□□ 1.29
HOMER3-205ENST00000542541 E7ESA3 106 aa23.1■■□□□ 1.29
HOMER3-205ENST00000542541 SLC4A1P02730 911 aa23.1■■□□□ 1.29
HOMER3-205ENST00000542541 C6P13671 934 aa23.1■■□□□ 1.29
HOMER3-205ENST00000542541 CNR2P34972 360 aa23.1■■□□□ 1.29
HOMER3-205ENST00000542541 CRADDP78560 199 aa23.1■■□□□ 1.29
HOMER3-205ENST00000542541 SGCGQ13326 291 aa23.1■■□□□ 1.29
HOMER3-205ENST00000542541 SKIDA1Q1XH10 827 aa23.1■■□□□ 1.29
HOMER3-205ENST00000542541 CCDC38Q502W7 563 aa23.1■■□□□ 1.29
HOMER3-205ENST00000542541 ZDHHC20Q5W0Z9 365 aa23.1■■□□□ 1.29
HOMER3-205ENST00000542541 FRMD1Q8N878 549 aa23.1■■□□□ 1.29
HOMER3-205ENST00000542541 CADM4Q8NFZ8 388 aa23.1■■□□□ 1.29
HOMER3-205ENST00000542541 NELL1Q92832 810 aa23.1■■□□□ 1.29
HOMER3-205ENST00000542541 PEX13Q92968 403 aa23.1■■□□□ 1.29
HOMER3-205ENST00000542541 STAMBPL1Q96FJ0 436 aa23.1■■□□□ 1.29
HOMER3-205ENST00000542541 KIFC1Q9BW19 673 aa23.1■■□□□ 1.29
HOMER3-205ENST00000542541 CDH19Q9H159 772 aa23.1■■□□□ 1.29
HOMER3-205ENST00000542541 MRM3Q9HC36 420 aaKnown RBP23.1■■□□□ 1.29
HOMER3-205ENST00000542541 ZSCAN32Q9NX65 697 aa23.1■■□□□ 1.29
HOMER3-205ENST00000542541 IL17CQ9P0M4 197 aa23.1■■□□□ 1.29
HOMER3-205ENST00000542541 RIMKLBQ9ULI2 386 aa23.1■■□□□ 1.29
HOMER3-205ENST00000542541 SOX13Q9UN79 622 aa23.1■■□□□ 1.29
HOMER3-205ENST00000542541 A0A0U1RQS6 177 aa23.09■■□□□ 1.29
HOMER3-205ENST00000542541 IGLON5A6NGN9 336 aa23.09■■□□□ 1.29
HOMER3-205ENST00000542541 WNT9AO14904 365 aa23.09■■□□□ 1.29
HOMER3-205ENST00000542541 SP9P0CG40 484 aa23.09■■□□□ 1.29
HOMER3-205ENST00000542541 CCR5P51681 352 aa23.09■■□□□ 1.29
HOMER3-205ENST00000542541 MSS51Q4VC12 460 aa23.09■■□□□ 1.29
HOMER3-205ENST00000542541 KIAA0895LQ68EN5 471 aa23.09■■□□□ 1.29
HOMER3-205ENST00000542541 WDR93Q6P2C0 686 aa23.09■■□□□ 1.29
HOMER3-205ENST00000542541 STYXQ8WUJ0 223 aa23.09■■□□□ 1.29
HOMER3-205ENST00000542541 EBNA1BP2Q99848 306 aaKnown RBP23.09■■□□□ 1.29
HOMER3-205ENST00000542541 C1QTNF7Q9BXJ2 289 aa23.09■■□□□ 1.29
HOMER3-205ENST00000542541 C1QTNF2Q9BXJ5 285 aa23.09■■□□□ 1.29
HOMER3-205ENST00000542541 CHRAC1Q9NRG0 131 aa23.09■■□□□ 1.29
HOMER3-205ENST00000542541 RPP40O75818 363 aaKnown RBP23.08■■□□□ 1.29
HOMER3-205ENST00000542541 ECHS1P30084 290 aa23.08■■□□□ 1.29
HOMER3-205ENST00000542541 HADHAP40939 763 aa23.08■■□□□ 1.29
HOMER3-205ENST00000542541 RPL6Q02878 288 aaKnown RBP23.08■■□□□ 1.29
HOMER3-205ENST00000542541 CREB5Q02930 508 aa23.08■■□□□ 1.29
HOMER3-205ENST00000542541 TMEM259Q4ZIN3 620 aa23.08■■□□□ 1.29
HOMER3-205ENST00000542541 CCNI2Q6ZMN8 369 aaPredicted RBP23.08■■□□□ 1.29
HOMER3-205ENST00000542541 CYP2U1Q7Z449 544 aa23.08■■□□□ 1.29
HOMER3-205ENST00000542541 HSD11B1LQ7Z5J1 315 aa23.08■■□□□ 1.29
HOMER3-205ENST00000542541 CCDC25Q86WR0 208 aa23.08■■□□□ 1.29
HOMER3-205ENST00000542541 NRSN1Q8IZ57 195 aa23.08■■□□□ 1.29
HOMER3-205ENST00000542541 MPP5Q8N3R9 675 aa23.08■■□□□ 1.29
HOMER3-205ENST00000542541 GAB3Q8WWW8 586 aa23.08■■□□□ 1.29
HOMER3-205ENST00000542541 ASB12Q8WXK4 309 aa23.08■■□□□ 1.29
HOMER3-205ENST00000542541 EID2BQ96D98 161 aa23.08■■□□□ 1.29
HOMER3-205ENST00000542541 COQ10AQ96MF6 247 aa23.08■■□□□ 1.29
HOMER3-205ENST00000542541 SLC17A9Q9BYT1 436 aa23.08■■□□□ 1.29
HOMER3-205ENST00000542541 ZFR2Q9UPR6 939 aaKnown RBP23.08■■□□□ 1.29
HOMER3-205ENST00000542541 FAM237BA0A1B0GVD1 139 aa23.08■■□□□ 1.28
HOMER3-205ENST00000542541 RECQL5O94762 991 aaPredicted RBP23.08■■□□□ 1.28
HOMER3-205ENST00000542541 C1SP09871 688 aa23.08■■□□□ 1.28
HOMER3-205ENST00000542541 NUDT1P36639 197 aa23.08■■□□□ 1.28
HOMER3-205ENST00000542541 SPINT3P49223 89 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms