RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 GDAP1L1Q96MZ0 367 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 FCRL4Q96PJ5 515 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 NUDT9Q9BW91 350 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 PANK2Q9BZ23 570 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 SIK2Q9H0K1 926 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 THAP9Q9H5L6 903 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 MMRN2Q9H8L6 949 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 PDE7BQ9NP56 450 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 SLC39A2Q9NP94 309 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 PHPT1Q9NRX4 125 aaPredicted RBP9.46□□□□□ -0.9
YBX3-211ENST00000541351 RAB20Q9NX57 234 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 FCF1Q9Y324 198 aaKnown RBP9.46□□□□□ -0.9
YBX3-211ENST00000541351 CHD5Q8TDI0 1954 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 TACC2O95359 2948 aa9.45□□□□□ -0.9
YBX3-211ENST00000541351 A0A0D9SEW6 157 aa9.45□□□□□ -0.9
YBX3-211ENST00000541351 PVALEFA0A1B0GWK0 134 aa9.45□□□□□ -0.9
YBX3-211ENST00000541351 ZNF185O15231 689 aa9.45□□□□□ -0.9
YBX3-211ENST00000541351 IGSF6O95976 241 aa9.45□□□□□ -0.9
YBX3-211ENST00000541351 GLI1P08151 1106 aa9.45□□□□□ -0.9
YBX3-211ENST00000541351 MYCLP1P12525 358 aaPredicted RBP9.45□□□□□ -0.9
YBX3-211ENST00000541351 FECHP22830 423 aa9.45□□□□□ -0.9
YBX3-211ENST00000541351 RPL13P26373 211 aaKnown RBP9.45□□□□□ -0.9
YBX3-211ENST00000541351 PTGIRP43119 386 aa9.45□□□□□ -0.9
YBX3-211ENST00000541351 MXI1P50539 228 aa9.45□□□□□ -0.9
YBX3-211ENST00000541351 TLE4Q04727 773 aa9.45□□□□□ -0.9
YBX3-211ENST00000541351 CUL2Q13617 745 aa9.45□□□□□ -0.9
YBX3-211ENST00000541351 MYLK3Q32MK0 819 aa9.45□□□□□ -0.9
YBX3-211ENST00000541351 MRGPRGQ86SM5 289 aa9.45□□□□□ -0.9
YBX3-211ENST00000541351 KCNMB4Q86W47 210 aa9.45□□□□□ -0.9
YBX3-211ENST00000541351 BPHLQ86WA6 291 aaPredicted RBP9.45□□□□□ -0.9
YBX3-211ENST00000541351 TGIF2LYQ8IUE0 185 aa9.45□□□□□ -0.9
YBX3-211ENST00000541351 CEP97Q8IW35 865 aa9.45□□□□□ -0.9
YBX3-211ENST00000541351 ARFGAP1Q8N6T3 406 aa9.45□□□□□ -0.9
YBX3-211ENST00000541351 PDILTQ8N807 584 aa9.45□□□□□ -0.9
YBX3-211ENST00000541351 IQUBQ8NA54 791 aa9.45□□□□□ -0.9
YBX3-211ENST00000541351 FUBP1Q96AE4 644 aaKnown RBP9.45□□□□□ -0.9
YBX3-211ENST00000541351 IP6K3Q96PC2 410 aa9.45□□□□□ -0.9
YBX3-211ENST00000541351 OR6C1Q96RD1 312 aa9.45□□□□□ -0.9
YBX3-211ENST00000541351 NCAPGQ9BPX3 1015 aa9.45□□□□□ -0.9
YBX3-211ENST00000541351 C7orf25Q9BPX7 421 aa9.45□□□□□ -0.9
YBX3-211ENST00000541351 SIDT1Q9NXL6 827 aaKnown RBP9.45□□□□□ -0.9
YBX3-211ENST00000541351 KLHL3Q9UH77 587 aa9.45□□□□□ -0.9
YBX3-211ENST00000541351 FBXO2Q9UK22 296 aaPredicted RBP9.45□□□□□ -0.9
YBX3-211ENST00000541351 FARSAQ9Y285 508 aaKnown RBP9.45□□□□□ -0.9
YBX3-211ENST00000541351 COQ6Q9Y2Z9 468 aa9.45□□□□□ -0.9
YBX3-211ENST00000541351 HS3ST4Q9Y661 456 aa9.45□□□□□ -0.9
YBX3-211ENST00000541351 LRP4O75096 1905 aa9.44□□□□□ -0.9
YBX3-211ENST00000541351 ARHGEF17Q96PE2 2063 aaPredicted RBP9.44□□□□□ -0.9
YBX3-211ENST00000541351 SYNJ2BP-COX16A0A087WUM0 186 aa9.44□□□□□ -0.9
YBX3-211ENST00000541351 A6NL46 340 aa9.44□□□□□ -0.9
YBX3-211ENST00000541351 F5H423 210 aaPredicted RBP9.44□□□□□ -0.9
YBX3-211ENST00000541351 PAGE1O75459 146 aa9.44□□□□□ -0.9
YBX3-211ENST00000541351 F9P00740 461 aa9.44□□□□□ -0.9
YBX3-211ENST00000541351 FGF5P12034 268 aa9.44□□□□□ -0.9
YBX3-211ENST00000541351 ZNF28P17035 718 aa9.44□□□□□ -0.9
YBX3-211ENST00000541351 TRIM23P36406 574 aa9.44□□□□□ -0.9
YBX3-211ENST00000541351 ACTR1BP42025 376 aa9.44□□□□□ -0.9
YBX3-211ENST00000541351 ACTR1AP61163 376 aa9.44□□□□□ -0.9
YBX3-211ENST00000541351 HHEXQ03014 270 aa9.44□□□□□ -0.9
YBX3-211ENST00000541351 KYNUQ16719 465 aa9.44□□□□□ -0.9
YBX3-211ENST00000541351 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.44□□□□□ -0.9
YBX3-211ENST00000541351 LRRC73Q5JTD7 316 aa9.44□□□□□ -0.9
YBX3-211ENST00000541351 MIIPQ5JXC2 388 aa9.44□□□□□ -0.9
YBX3-211ENST00000541351 ZNF295-AS1Q8N0V1 137 aa9.44□□□□□ -0.9
YBX3-211ENST00000541351 OR6K2Q8NGY2 324 aa9.44□□□□□ -0.9
YBX3-211ENST00000541351 ITLN2Q8WWU7 325 aaPredicted RBP9.44□□□□□ -0.9
YBX3-211ENST00000541351 COX16Q9P0S2 106 aa9.44□□□□□ -0.9
YBX3-211ENST00000541351 SNX7Q9UNH6 387 aa9.44□□□□□ -0.9
YBX3-211ENST00000541351 PCDHGA10Q9Y5H3 936 aa9.44□□□□□ -0.9
YBX3-211ENST00000541351 MN1Q10571 1320 aaPredicted RBP9.43□□□□□ -0.9
YBX3-211ENST00000541351 SPAG6O75602 509 aa9.43□□□□□ -0.9
YBX3-211ENST00000541351 KLK3P07288 261 aaPredicted RBP9.43□□□□□ -0.9
YBX3-211ENST00000541351 TRIM49P0CI25 452 aa9.43□□□□□ -0.9
YBX3-211ENST00000541351 TRIM49CP0CI26 452 aa9.43□□□□□ -0.9
YBX3-211ENST00000541351 AGAP20933 346 aa9.43□□□□□ -0.9
YBX3-211ENST00000541351 PSMC2P35998 433 aaKnown RBP9.43□□□□□ -0.9
YBX3-211ENST00000541351 GNPDA1P46926 289 aa9.43□□□□□ -0.9
YBX3-211ENST00000541351 LIG3P49916 1009 aa9.43□□□□□ -0.9
YBX3-211ENST00000541351 VAV2P52735 878 aa9.43□□□□□ -0.9
YBX3-211ENST00000541351 SMSP52788 366 aa9.43□□□□□ -0.9
YBX3-211ENST00000541351 SNX16P57768 344 aa9.43□□□□□ -0.9
YBX3-211ENST00000541351 GNA12Q03113 381 aa9.43□□□□□ -0.9
YBX3-211ENST00000541351 PPP3CAQ08209 521 aa9.43□□□□□ -0.9
YBX3-211ENST00000541351 EIF4EBP2Q13542 120 aaPredicted RBP9.43□□□□□ -0.9
YBX3-211ENST00000541351 LRP8Q14114 963 aa9.43□□□□□ -0.9
YBX3-211ENST00000541351 BRMS1LQ5PSV4 323 aa9.43□□□□□ -0.9
YBX3-211ENST00000541351 C1orf220Q5T0J3 134 aa9.43□□□□□ -0.9
YBX3-211ENST00000541351 HGSNATQ68CP4 663 aa9.43□□□□□ -0.9
YBX3-211ENST00000541351 BRAT1Q6PJG6 821 aa9.43□□□□□ -0.9
YBX3-211ENST00000541351 CXXC5Q7LFL8 322 aaKnown RBP9.43□□□□□ -0.9
YBX3-211ENST00000541351 TFAP2DQ7Z6R9 452 aa9.43□□□□□ -0.9
YBX3-211ENST00000541351 SLC9B2Q86UD5 537 aa9.43□□□□□ -0.9
YBX3-211ENST00000541351 CLEC1AQ8NC01 280 aa9.43□□□□□ -0.9
YBX3-211ENST00000541351 OR7D4Q8NG98 312 aa9.43□□□□□ -0.9
YBX3-211ENST00000541351 STK32AQ8WU08 396 aa9.43□□□□□ -0.9
YBX3-211ENST00000541351 FAR1Q8WVX9 515 aa9.43□□□□□ -0.9
YBX3-211ENST00000541351 CASKIN2Q8WXE0 1202 aa9.43□□□□□ -0.9
YBX3-211ENST00000541351 ARHGEF2Q92974 986 aaKnown RBP9.43□□□□□ -0.9
YBX3-211ENST00000541351 EEF2KMTQ96G04 330 aa9.43□□□□□ -0.9
YBX3-211ENST00000541351 CLIC6Q96NY7 704 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms