RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 PDE2AO00408 941 aaPredicted RBP18.78■□□□□ 0.6
VPS33A-205ENST00000541169 PRKCGP05129 697 aa18.78■□□□□ 0.6
VPS33A-205ENST00000541169 ITIH2P19823 946 aa18.78■□□□□ 0.6
VPS33A-205ENST00000541169 TGM1P22735 817 aa18.78■□□□□ 0.6
VPS33A-205ENST00000541169 LHCGRP22888 699 aa18.78■□□□□ 0.6
VPS33A-205ENST00000541169 HMGCLP35914 325 aa18.78■□□□□ 0.6
VPS33A-205ENST00000541169 PI4KAP42356 2102 aa18.78■□□□□ 0.6
VPS33A-205ENST00000541169 LMAN1P49257 510 aa18.78■□□□□ 0.6
VPS33A-205ENST00000541169 CSNK1EP49674 416 aaKnown RBP18.78■□□□□ 0.6
VPS33A-205ENST00000541169 STC1P52823 247 aa18.78■□□□□ 0.6
VPS33A-205ENST00000541169 IRX4P78413 519 aa18.78■□□□□ 0.6
VPS33A-205ENST00000541169 PTSQ03393 145 aa18.78■□□□□ 0.6
VPS33A-205ENST00000541169 SEMA5AQ13591 1074 aa18.78■□□□□ 0.6
VPS33A-205ENST00000541169 SYDE1Q6ZW31 735 aaPredicted RBP18.78■□□□□ 0.6
VPS33A-205ENST00000541169 KDELC2Q7Z4H8 507 aa18.78■□□□□ 0.6
VPS33A-205ENST00000541169 C17orf53Q8N3J3 647 aaPredicted RBP18.78■□□□□ 0.6
VPS33A-205ENST00000541169 NUS1Q96E22 293 aa18.78■□□□□ 0.6
VPS33A-205ENST00000541169 DTD2Q96FN9 168 aa18.78■□□□□ 0.6
VPS33A-205ENST00000541169 C16orf45Q96MC5 204 aaPredicted RBP18.78■□□□□ 0.6
VPS33A-205ENST00000541169 TBL1YQ9BQ87 522 aa18.78■□□□□ 0.6
VPS33A-205ENST00000541169 GDF3Q9NR23 364 aa18.78■□□□□ 0.6
VPS33A-205ENST00000541169 PCYOX1Q9UHG3 505 aa18.78■□□□□ 0.6
VPS33A-205ENST00000541169 SDK1Q7Z5N4 2213 aa18.77■□□□□ 0.6
VPS33A-205ENST00000541169 SUN1O94901 812 aa18.77■□□□□ 0.6
VPS33A-205ENST00000541169 METTL18O95568 372 aa18.77■□□□□ 0.6
VPS33A-205ENST00000541169 ECEL1O95672 775 aa18.77■□□□□ 0.6
VPS33A-205ENST00000541169 HOXC4P09017 264 aaPredicted RBP18.77■□□□□ 0.6
VPS33A-205ENST00000541169 ATXN1LP0C7T5 689 aaKnown RBP18.77■□□□□ 0.6
VPS33A-205ENST00000541169 TSHRP16473 764 aa18.77■□□□□ 0.6
VPS33A-205ENST00000541169 ENGP17813 658 aa18.77■□□□□ 0.6
VPS33A-205ENST00000541169 CDKN3Q16667 212 aa18.77■□□□□ 0.6
VPS33A-205ENST00000541169 AASDHQ4L235 1098 aaPredicted RBP18.77■□□□□ 0.6
VPS33A-205ENST00000541169 ARMC3Q5W041 872 aa18.77■□□□□ 0.6
VPS33A-205ENST00000541169 ESRP1Q6NXG1 681 aaKnown RBP18.77■□□□□ 0.6
VPS33A-205ENST00000541169 TMC3Q7Z5M5 1100 aa18.77■□□□□ 0.6
VPS33A-205ENST00000541169 TP53I13Q8NBR0 393 aaPredicted RBP18.77■□□□□ 0.6
VPS33A-205ENST00000541169 DTX3LQ8TDB6 740 aa18.77■□□□□ 0.6
VPS33A-205ENST00000541169 KLK6Q92876 244 aa18.77■□□□□ 0.6
VPS33A-205ENST00000541169 GORASP1Q9BQQ3 440 aa18.77■□□□□ 0.6
VPS33A-205ENST00000541169 FICDQ9BVA6 458 aa18.77■□□□□ 0.6
VPS33A-205ENST00000541169 GPR63Q9BZJ6 419 aa18.77■□□□□ 0.6
VPS33A-205ENST00000541169 ETNK1Q9HBU6 452 aa18.77■□□□□ 0.6
VPS33A-205ENST00000541169 RAB6BQ9NRW1 208 aa18.77■□□□□ 0.6
VPS33A-205ENST00000541169 NFKBIL1Q9UBC1 381 aaPredicted RBP18.77■□□□□ 0.6
VPS33A-205ENST00000541169 ZNF711Q9Y462 761 aa18.77■□□□□ 0.6
VPS33A-205ENST00000541169 VPS13AQ96RL7 3174 aa18.77■□□□□ 0.59
VPS33A-205ENST00000541169 GON4LQ3T8J9 2241 aa18.76■□□□□ 0.59
VPS33A-205ENST00000541169 ZFHX2Q9C0A1 2572 aaPredicted RBP18.76■□□□□ 0.59
VPS33A-205ENST00000541169 CACNA1EQ15878 2313 aa18.76■□□□□ 0.59
VPS33A-205ENST00000541169 LNP1A1A4G5 178 aa18.76■□□□□ 0.59
VPS33A-205ENST00000541169 C2orf81A6NN90 581 aa18.76■□□□□ 0.59
VPS33A-205ENST00000541169 A8MX80 341 aa18.76■□□□□ 0.59
VPS33A-205ENST00000541169 CRTAMO95727 393 aa18.76■□□□□ 0.59
VPS33A-205ENST00000541169 AGTP01019 485 aa18.76■□□□□ 0.59
VPS33A-205ENST00000541169 ZNF883P0CG24 379 aa18.76■□□□□ 0.59
VPS33A-205ENST00000541169 KELP23276 732 aa18.76■□□□□ 0.59
VPS33A-205ENST00000541169 HTR1BP28222 390 aa18.76■□□□□ 0.59
VPS33A-205ENST00000541169 RPL22P35268 128 aaKnown RBP18.76■□□□□ 0.59
VPS33A-205ENST00000541169 KCNJ1P48048 391 aa18.76■□□□□ 0.59
VPS33A-205ENST00000541169 ARRB1P49407 418 aaPredicted RBP18.76■□□□□ 0.59
VPS33A-205ENST00000541169 THOP1P52888 689 aa18.76■□□□□ 0.59
VPS33A-205ENST00000541169 LIMK1P53667 647 aa18.76■□□□□ 0.59
VPS33A-205ENST00000541169 DCDC1P59894 354 aa18.76■□□□□ 0.59
VPS33A-205ENST00000541169 PFN3P60673 137 aa18.76■□□□□ 0.59
VPS33A-205ENST00000541169 SARNPP82979 210 aaKnown RBP18.76■□□□□ 0.59
VPS33A-205ENST00000541169 SLC14A1Q13336 389 aa18.76■□□□□ 0.59
VPS33A-205ENST00000541169 WSCD2Q2TBF2 565 aa18.76■□□□□ 0.59
VPS33A-205ENST00000541169 GCNT7Q6ZNI0 430 aa18.76■□□□□ 0.59
VPS33A-205ENST00000541169 TECPR1Q7Z6L1 1165 aa18.76■□□□□ 0.59
VPS33A-205ENST00000541169 DCLK2Q8N568 766 aa18.76■□□□□ 0.59
VPS33A-205ENST00000541169 PDCD7Q8N8D1 485 aaKnown RBP18.76■□□□□ 0.59
VPS33A-205ENST00000541169 BRSK1Q8TDC3 778 aa18.76■□□□□ 0.59
VPS33A-205ENST00000541169 CAPZA3Q96KX2 299 aa18.76■□□□□ 0.59
VPS33A-205ENST00000541169 PARD6AQ9NPB6 346 aa18.76■□□□□ 0.59
VPS33A-205ENST00000541169 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.76■□□□□ 0.59
VPS33A-205ENST00000541169 GPR179Q6PRD1 2367 aa18.75■□□□□ 0.59
VPS33A-205ENST00000541169 LRRK1Q38SD2 2015 aa18.75■□□□□ 0.59
VPS33A-205ENST00000541169 A0A1B0GVT2 93 aa18.75■□□□□ 0.59
VPS33A-205ENST00000541169 PATE3B3GLJ2 98 aa18.75■□□□□ 0.59
VPS33A-205ENST00000541169 NDC80O14777 642 aa18.75■□□□□ 0.59
VPS33A-205ENST00000541169 CLDN7O95471 211 aa18.75■□□□□ 0.59
VPS33A-205ENST00000541169 KRT14P02533 472 aa18.75■□□□□ 0.59
VPS33A-205ENST00000541169 THEGLP0DJG4 465 aa18.75■□□□□ 0.59
VPS33A-205ENST00000541169 TRIM23P36406 574 aa18.75■□□□□ 0.59
VPS33A-205ENST00000541169 CTSKP43235 329 aa18.75■□□□□ 0.59
VPS33A-205ENST00000541169 SPINT3P49223 89 aa18.75■□□□□ 0.59
VPS33A-205ENST00000541169 NXPH1P58417 271 aa18.75■□□□□ 0.59
VPS33A-205ENST00000541169 CKAP4Q07065 602 aaKnown RBP18.75■□□□□ 0.59
VPS33A-205ENST00000541169 CDH17Q12864 832 aa18.75■□□□□ 0.59
VPS33A-205ENST00000541169 GRIK2Q13002 908 aa18.75■□□□□ 0.59
VPS33A-205ENST00000541169 IRF4Q15306 451 aa18.75■□□□□ 0.59
VPS33A-205ENST00000541169 TAF1AQ15573 450 aaPredicted RBP18.75■□□□□ 0.59
VPS33A-205ENST00000541169 PDPK2PQ6A1A2 396 aa18.75■□□□□ 0.59
VPS33A-205ENST00000541169 PNCKQ6P2M8 343 aa18.75■□□□□ 0.59
VPS33A-205ENST00000541169 Q6ZSR6 202 aa18.75■□□□□ 0.59
VPS33A-205ENST00000541169 GLT6D1Q7Z4J2 308 aa18.75■□□□□ 0.59
VPS33A-205ENST00000541169 HSD11B1LQ7Z5J1 315 aa18.75■□□□□ 0.59
VPS33A-205ENST00000541169 TSPAN33Q86UF1 283 aa18.75■□□□□ 0.59
VPS33A-205ENST00000541169 SLC25A41Q8N5S1 370 aa18.75■□□□□ 0.59
VPS33A-205ENST00000541169 BMFQ96LC9 184 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms