RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 RAP1GDS1P52306 607 aa17.1■□□□□ 0.33
EPB41L3-204ENST00000540638 IL10RBQ08334 325 aa17.1■□□□□ 0.33
EPB41L3-204ENST00000540638 FUT11Q495W5 492 aa17.1■□□□□ 0.33
EPB41L3-204ENST00000540638 CCSAPQ6IQ19 270 aaPredicted RBP17.1■□□□□ 0.33
EPB41L3-204ENST00000540638 GPR21Q99679 349 aa17.1■□□□□ 0.33
EPB41L3-204ENST00000540638 TREX1Q9NSU2 369 aa17.1■□□□□ 0.33
EPB41L3-204ENST00000540638 CLIC5Q9NZA1 410 aa17.1■□□□□ 0.33
EPB41L3-204ENST00000540638 FKBPLQ9UIM3 349 aa17.1■□□□□ 0.33
EPB41L3-204ENST00000540638 LRCH1Q9Y2L9 728 aa17.1■□□□□ 0.33
EPB41L3-204ENST00000540638 CAPN8A6NHC0 703 aa17.1■□□□□ 0.33
EPB41L3-204ENST00000540638 ZNF195O14628 629 aa17.1■□□□□ 0.33
EPB41L3-204ENST00000540638 MYL4P12829 197 aa17.1■□□□□ 0.33
EPB41L3-204ENST00000540638 SGO1Q5FBB7 561 aa17.1■□□□□ 0.33
EPB41L3-204ENST00000540638 CCDC117Q8IWD4 279 aaPredicted RBP17.1■□□□□ 0.33
EPB41L3-204ENST00000540638 LSMEM2Q8N112 164 aa17.1■□□□□ 0.33
EPB41L3-204ENST00000540638 STN1Q9H668 368 aaKnown RBP17.1■□□□□ 0.33
EPB41L3-204ENST00000540638 AURKCQ9UQB9 309 aa17.1■□□□□ 0.33
EPB41L3-204ENST00000540638 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.1■□□□□ 0.33
EPB41L3-204ENST00000540638 SCN10AQ9Y5Y9 1956 aa17.1■□□□□ 0.33
EPB41L3-204ENST00000540638 TYW5A2RUC4 315 aaKnown RBP17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 PSMD12O00232 456 aaPredicted RBP17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 COCHO43405 550 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 OR1I1O60431 355 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 NIPSNAP2O75323 286 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 C1QTNF8P60827 252 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 BTKQ06187 659 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 TSNQ15631 228 aaKnown RBP17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 PAOXQ6QHF9 649 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 DHDDSQ86SQ9 333 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 ARL14EPQ8N8R7 260 aaPredicted RBP17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 BCL7CQ8WUZ0 217 aaPredicted RBP17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 PPP1R2P1Q96PQ5 205 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 MARCH5Q9NX47 278 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 SPO11Q9Y5K1 396 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 PARP15Q460N3 678 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 LRRC73Q5JTD7 316 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 RNF220Q5VTB9 566 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 TXNDC8Q6A555 127 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 NPAS4Q8IUM7 802 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 RPL10LQ96L21 214 aaKnown RBP17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 C1orf74Q96LT6 269 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 SUFUQ9UMX1 484 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 ZBBXA8MT70 800 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 DNAJA2O60884 412 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 TRIM16O95361 564 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 S1PR4O95977 384 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 ALPIP09923 528 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 SEMA3AQ14563 771 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 FRA10AC1Q70Z53 315 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 LRRC49Q8IUZ0 686 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 ARRDC2Q8TBH0 407 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 RDH11Q8TC12 318 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 CDKN2AIPNLQ96HQ2 116 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 UNC93B1Q9H1C4 597 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 EBF3Q9H4W6 596 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 LRRC42Q9Y546 428 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 RAI2Q9Y5P3 530 aa17.09■□□□□ 0.33
EPB41L3-204ENST00000540638 CRTAMO95727 393 aa17.08■□□□□ 0.33
EPB41L3-204ENST00000540638 CES1P23141 567 aa17.08■□□□□ 0.33
EPB41L3-204ENST00000540638 MC4RP32245 332 aa17.08■□□□□ 0.33
EPB41L3-204ENST00000540638 SULT2A1Q06520 285 aa17.08■□□□□ 0.33
EPB41L3-204ENST00000540638 USP41Q3LFD5 358 aa17.08■□□□□ 0.33
EPB41L3-204ENST00000540638 RPAINQ86UA6 219 aa17.08■□□□□ 0.33
EPB41L3-204ENST00000540638 FBXO39Q8N4B4 442 aa17.08■□□□□ 0.33
EPB41L3-204ENST00000540638 DIS3LQ8TF46 1054 aaKnown RBP17.08■□□□□ 0.33
EPB41L3-204ENST00000540638 C1orf50Q9BV19 199 aa17.08■□□□□ 0.33
EPB41L3-204ENST00000540638 IGSF5Q9NSI5 407 aa17.08■□□□□ 0.33
EPB41L3-204ENST00000540638 VTI1BQ9UEU0 232 aa17.08■□□□□ 0.33
EPB41L3-204ENST00000540638 SLC30A1Q9Y6M5 507 aa17.08■□□□□ 0.33
EPB41L3-204ENST00000540638 NPEPPSL1A6NEC2 478 aa17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 FKBP6O75344 327 aa17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 BAIAP3O94812 1187 aa17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 AQP4P55087 323 aa17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 CCNIQ14094 377 aa17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 DBN1Q16643 649 aa17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 NRF1Q16656 503 aa17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 KDM1BQ8NB78 822 aa17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 WBP2Q969T9 261 aa17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 PTERQ96BW5 349 aa17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 CASD1Q96PB1 797 aa17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 EGFL8Q99944 293 aa17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 K7ERQ8 282 aa17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 CDC7O00311 574 aa17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 LDB2O43679 373 aa17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 FGF1P05230 155 aa17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 MMP2P08253 660 aa17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 MZF1P28698 734 aaPredicted RBP17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 EEF1DP29692 281 aaKnown RBP17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 WEE1P30291 646 aa17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 CDC16Q13042 620 aa17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 MED21Q13503 144 aa17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 TECRLQ5HYJ1 363 aa17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 SIDT2Q8NBJ9 832 aaKnown RBP17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 OR6Y1Q8NGX8 325 aa17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 ECSITQ9BQ95 431 aa17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 BATF3Q9NR55 127 aa17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 ADAMTS6Q9UKP5 1117 aa17.08■□□□□ 0.32
EPB41L3-204ENST00000540638 SLC7A4O43246 635 aa17.07■□□□□ 0.32
EPB41L3-204ENST00000540638 RPP40O75818 363 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms