RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 INPP5DQ92835 1189 aa20.41■□□□□ 0.86
DDX55-205ENST00000538744 UBXN10Q96LJ8 280 aa20.41■□□□□ 0.86
DDX55-205ENST00000538744 RILPQ96NA2 401 aa20.41■□□□□ 0.86
DDX55-205ENST00000538744 TCF12Q99081 682 aa20.41■□□□□ 0.86
DDX55-205ENST00000538744 LRMDAQ9H2I8 198 aa20.41■□□□□ 0.86
DDX55-205ENST00000538744 ARHGEF3Q9NR81 526 aa20.41■□□□□ 0.86
DDX55-205ENST00000538744 TDP1Q9NUW8 608 aa20.41■□□□□ 0.86
DDX55-205ENST00000538744 TRIM33Q9UPN9 1127 aa20.41■□□□□ 0.86
DDX55-205ENST00000538744 MKI67P46013 3256 aaKnown RBP20.41■□□□□ 0.86
DDX55-205ENST00000538744 NOTCH4Q99466 2003 aa20.41■□□□□ 0.86
DDX55-205ENST00000538744 BPTFQ12830 3046 aa20.41■□□□□ 0.86
DDX55-205ENST00000538744 STX7O15400 261 aaKnown RBP20.41■□□□□ 0.86
DDX55-205ENST00000538744 DLX3O60479 287 aa20.41■□□□□ 0.86
DDX55-205ENST00000538744 CCDC22O60826 627 aa20.41■□□□□ 0.86
DDX55-205ENST00000538744 PGLSO95336 258 aa20.41■□□□□ 0.86
DDX55-205ENST00000538744 CBX6O95503 412 aa20.41■□□□□ 0.86
DDX55-205ENST00000538744 IGSF6O95976 241 aa20.41■□□□□ 0.86
DDX55-205ENST00000538744 ALOX15P16050 662 aaPredicted RBP20.41■□□□□ 0.86
DDX55-205ENST00000538744 RPL26P61254 145 aaKnown RBP20.41■□□□□ 0.86
DDX55-205ENST00000538744 CAMK1Q14012 370 aa20.41■□□□□ 0.86
DDX55-205ENST00000538744 KRT72Q14CN4 511 aa20.41■□□□□ 0.86
DDX55-205ENST00000538744 TTC31Q49AM3 519 aaPredicted RBP20.41■□□□□ 0.86
DDX55-205ENST00000538744 PITRM1Q5JRX3 1037 aa20.41■□□□□ 0.86
DDX55-205ENST00000538744 ZNF549Q6P9A3 640 aa20.41■□□□□ 0.86
DDX55-205ENST00000538744 SPRED2Q7Z698 418 aa20.41■□□□□ 0.86
DDX55-205ENST00000538744 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.41■□□□□ 0.86
DDX55-205ENST00000538744 LMLNQ96KR4 655 aa20.41■□□□□ 0.86
DDX55-205ENST00000538744 MCOLN1Q9GZU1 580 aa20.41■□□□□ 0.86
DDX55-205ENST00000538744 DRC3Q9H069 523 aa20.41■□□□□ 0.86
DDX55-205ENST00000538744 POPDC3Q9HBV1 291 aa20.41■□□□□ 0.86
DDX55-205ENST00000538744 DNAJC28Q9NX36 388 aa20.41■□□□□ 0.86
DDX55-205ENST00000538744 EVLQ9UI08 416 aaPredicted RBP20.41■□□□□ 0.86
DDX55-205ENST00000538744 INTS6Q9UL03 887 aaKnown RBP20.41■□□□□ 0.86
DDX55-205ENST00000538744 RPL26L1Q9UNX3 145 aaKnown RBP20.41■□□□□ 0.86
DDX55-205ENST00000538744 RBP1P09455 135 aa20.4■□□□□ 0.86
DDX55-205ENST00000538744 KCNJ2P63252 427 aa20.4■□□□□ 0.86
DDX55-205ENST00000538744 BCL2L1Q07817 233 aa20.4■□□□□ 0.86
DDX55-205ENST00000538744 RCN2Q14257 317 aa20.4■□□□□ 0.86
DDX55-205ENST00000538744 ACAP2Q15057 778 aa20.4■□□□□ 0.86
DDX55-205ENST00000538744 SLC5A9Q2M3M2 681 aa20.4■□□□□ 0.86
DDX55-205ENST00000538744 AARSD1Q9BTE6 412 aaKnown RBP20.4■□□□□ 0.86
DDX55-205ENST00000538744 UNKQ9C0B0 810 aaKnown RBP20.4■□□□□ 0.86
DDX55-205ENST00000538744 NMUR2Q9GZQ4 415 aa20.4■□□□□ 0.86
DDX55-205ENST00000538744 CDH19Q9H159 772 aa20.4■□□□□ 0.86
DDX55-205ENST00000538744 MAGEE1Q9HCI5 957 aa20.4■□□□□ 0.86
DDX55-205ENST00000538744 VPS9D1Q9Y2B5 631 aa20.4■□□□□ 0.86
DDX55-205ENST00000538744 ZNF711Q9Y462 761 aa20.4■□□□□ 0.86
DDX55-205ENST00000538744 GBF1Q92538 1859 aa20.4■□□□□ 0.86
DDX55-205ENST00000538744 ARHGEF15O94989 841 aa20.39■□□□□ 0.86
DDX55-205ENST00000538744 ATP5F1P24539 256 aaPredicted RBP20.39■□□□□ 0.86
DDX55-205ENST00000538744 PRSS36Q5K4E3 855 aa20.39■□□□□ 0.86
DDX55-205ENST00000538744 TTC7BQ86TV6 843 aa20.39■□□□□ 0.86
DDX55-205ENST00000538744 CAMK1DQ8IU85 385 aa20.39■□□□□ 0.86
DDX55-205ENST00000538744 KIF2BQ8N4N8 673 aa20.39■□□□□ 0.86
DDX55-205ENST00000538744 ZNF781Q8N8C0 355 aa20.39■□□□□ 0.86
DDX55-205ENST00000538744 RIN3Q8TB24 985 aa20.39■□□□□ 0.86
DDX55-205ENST00000538744 PRR11Q96HE9 360 aaPredicted RBP20.39■□□□□ 0.86
DDX55-205ENST00000538744 LBHD1Q9BQE6 289 aaPredicted RBP20.39■□□□□ 0.86
DDX55-205ENST00000538744 EBF4Q9BQW3 602 aa20.39■□□□□ 0.86
DDX55-205ENST00000538744 ILKAPQ9H0C8 392 aaPredicted RBP20.39■□□□□ 0.86
DDX55-205ENST00000538744 FKBPLQ9UIM3 349 aa20.39■□□□□ 0.86
DDX55-205ENST00000538744 LNPEPQ9UIQ6 1025 aa20.39■□□□□ 0.86
DDX55-205ENST00000538744 ZMYM5Q9UJ78 669 aa20.39■□□□□ 0.86
DDX55-205ENST00000538744 H7C0S8 307 aa20.39■□□□□ 0.85
DDX55-205ENST00000538744 PFDN6O15212 129 aa20.39■□□□□ 0.85
DDX55-205ENST00000538744 SOCS5O75159 536 aa20.39■□□□□ 0.85
DDX55-205ENST00000538744 NDUFS3O75489 264 aa20.39■□□□□ 0.85
DDX55-205ENST00000538744 PENKP01210 267 aaPredicted RBP20.39■□□□□ 0.85
DDX55-205ENST00000538744 PRSS56P0CW18 603 aa20.39■□□□□ 0.85
DDX55-205ENST00000538744 MYOGP15173 224 aa20.39■□□□□ 0.85
DDX55-205ENST00000538744 MC4RP32245 332 aa20.39■□□□□ 0.85
DDX55-205ENST00000538744 SUOXP51687 545 aa20.39■□□□□ 0.85
DDX55-205ENST00000538744 NAGLUP54802 743 aa20.39■□□□□ 0.85
DDX55-205ENST00000538744 DNAJB13P59910 316 aa20.39■□□□□ 0.85
DDX55-205ENST00000538744 PFKPQ01813 784 aa20.39■□□□□ 0.85
DDX55-205ENST00000538744 PDE12Q6L8Q7 609 aaKnown RBP20.39■□□□□ 0.85
DDX55-205ENST00000538744 PIM3Q86V86 326 aa20.39■□□□□ 0.85
DDX55-205ENST00000538744 TMEM25Q86YD3 366 aa20.39■□□□□ 0.85
DDX55-205ENST00000538744 OR6K2Q8NGY2 324 aa20.39■□□□□ 0.85
DDX55-205ENST00000538744 ANKRD49Q8WVL7 239 aa20.39■□□□□ 0.85
DDX55-205ENST00000538744 PIH1D2Q8WWB5 315 aa20.39■□□□□ 0.85
DDX55-205ENST00000538744 LPGAT1Q92604 370 aa20.39■□□□□ 0.85
DDX55-205ENST00000538744 CCDC126Q96EE4 140 aa20.39■□□□□ 0.85
DDX55-205ENST00000538744 NSL1Q96IY1 281 aa20.39■□□□□ 0.85
DDX55-205ENST00000538744 TMEM237Q96Q45 408 aa20.39■□□□□ 0.85
DDX55-205ENST00000538744 ATP13A3Q9H7F0 1226 aa20.39■□□□□ 0.85
DDX55-205ENST00000538744 ARL8BQ9NVJ2 186 aa20.39■□□□□ 0.85
DDX55-205ENST00000538744 ZDHHC7Q9NXF8 308 aa20.39■□□□□ 0.85
DDX55-205ENST00000538744 TBC1D14Q9P2M4 693 aa20.39■□□□□ 0.85
DDX55-205ENST00000538744 DPP7Q9UHL4 492 aa20.39■□□□□ 0.85
DDX55-205ENST00000538744 APOBEC2Q9Y235 224 aaKnown RBP20.39■□□□□ 0.85
DDX55-205ENST00000538744 RAP2CQ9Y3L5 183 aa20.39■□□□□ 0.85
DDX55-205ENST00000538744 PKP3Q9Y446 797 aa20.39■□□□□ 0.85
DDX55-205ENST00000538744 UBA6A0AVT1 1052 aaPredicted RBP20.38■□□□□ 0.85
DDX55-205ENST00000538744 HTRA2O43464 458 aaPredicted RBP20.38■□□□□ 0.85
DDX55-205ENST00000538744 HLA-FP30511 346 aa20.38■□□□□ 0.85
DDX55-205ENST00000538744 HK2P52789 917 aa20.38■□□□□ 0.85
DDX55-205ENST00000538744 ELF3P78545 371 aaPredicted RBP20.38■□□□□ 0.85
DDX55-205ENST00000538744 NTHL1P78549 312 aa20.38■□□□□ 0.85
DDX55-205ENST00000538744 ZNF77Q15935 545 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms