RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 MRPL49Q13405 166 aaKnown RBP11.15□□□□□ -0.62
CLPB-208ENST00000538021 SQSTM1Q13501 440 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 STIM1Q13586 685 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 RAPGEF1Q13905 1077 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 NADK2Q4G0N4 442 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 INO80DQ53TQ3 878 aaPredicted RBP11.15□□□□□ -0.62
CLPB-208ENST00000538021 ISM2Q6H9L7 571 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 KLHL10Q6JEL2 608 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 PNCKQ6P2M8 343 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 TMEM135Q86UB9 458 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 ZSWIM9Q86XI8 627 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 DNAAF5Q86Y56 855 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 PELI3Q8N2H9 469 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 OR10G6Q8NH81 332 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 CASKIN2Q8WXE0 1202 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 C18orf8Q96DM3 657 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 GSDMAQ96QA5 445 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 SLC38A3Q99624 504 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 CRACR2AQ9BSW2 395 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 PDCL3Q9H2J4 239 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 ZNF768Q9H5H4 540 aaKnown RBP11.15□□□□□ -0.62
CLPB-208ENST00000538021 FBXO8Q9NRD0 319 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 MAP10Q9P2G4 905 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 CROTQ9UKG9 612 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 MAP4K5Q9Y4K4 846 aa11.15□□□□□ -0.62
CLPB-208ENST00000538021 OAS3Q9Y6K5 1087 aaKnown RBP11.15□□□□□ -0.62
CLPB-208ENST00000538021 PRRC2CQ9Y520 2896 aaKnown RBP11.14□□□□□ -0.63
CLPB-208ENST00000538021 TSPAN11A1L157 253 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 A8MX80 341 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 FAM72CH0Y354 149 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 DNAJB5O75953 348 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 LRIG2O94898 1065 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 SMC2O95347 1197 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 DLGAP3O95886 979 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 CEACAM5P06731 702 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 MYCLP1P12525 358 aaPredicted RBP11.14□□□□□ -0.63
CLPB-208ENST00000538021 ACTR1BP42025 376 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 PMS2P54278 862 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 ACTR1AP61163 376 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 CTBSQ01459 385 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 PEX6Q13608 980 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 ACOX1Q15067 660 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 CYTH1Q15438 398 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 CDO1Q16878 200 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 C2CD6Q53TS8 623 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 FAM72AQ5TYM5 149 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 MANEALQ5VSG8 457 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 C1QL3Q5VWW1 255 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 FAM72DQ6L9T8 149 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 TRNP1Q6NT89 227 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 BRAT1Q6PJG6 821 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 SLC47A2Q86VL8 602 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 FAM72BQ86X60 149 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 CAMK1DQ8IU85 385 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 TRIM59Q8IWR1 403 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 SMARCE1Q969G3 411 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 TBC1D31Q96DN5 1066 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 DHTKD1Q96HY7 919 aaPredicted RBP11.14□□□□□ -0.63
CLPB-208ENST00000538021 FAM81BQ96LP2 452 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 MAGEB5Q9BZ81 275 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 KLC2Q9H0B6 622 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 PHPT1Q9NRX4 125 aaPredicted RBP11.14□□□□□ -0.63
CLPB-208ENST00000538021 TRNAU1APQ9NX07 287 aaKnown RBP11.14□□□□□ -0.63
CLPB-208ENST00000538021 PDP2Q9P2J9 529 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 LHX3Q9UBR4 397 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 KLHL3Q9UH77 587 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 SUFUQ9UMX1 484 aa11.14□□□□□ -0.63
CLPB-208ENST00000538021 PIPSLA2A3N6 862 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 CFAP69A5D8W1 941 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 GOLGA6CA6NDK9 693 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 GOLGA6BA6NDN3 693 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 TCP11X1B4DZS4 312 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 BUB1BO60566 1050 aaPredicted RBP11.13□□□□□ -0.63
CLPB-208ENST00000538021 FUCA1P04066 466 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 GOLGA6DP0CG33 693 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 SLC9A1P19634 815 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 ADRA1BP35368 520 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 MAPK9P45984 424 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 APBA1Q02410 837 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 RALGDSQ12967 914 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 GRM3Q14832 879 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 RAB6CQ53S08 254 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 TRIM65Q6PJ69 517 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 LIPIQ6XZB0 460 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 BNIPLQ7Z465 357 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 ARHGAP22Q7Z5H3 698 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 XYLT1Q86Y38 959 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 TMEM35BQ8NCS4 154 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 PDCD6IPQ8WUM4 868 aaKnown RBP11.13□□□□□ -0.63
CLPB-208ENST00000538021 PTCD2Q8WV60 388 aaKnown RBP11.13□□□□□ -0.63
CLPB-208ENST00000538021 NCSTNQ92542 709 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 ZNF641Q96N77 438 aaPredicted RBP11.13□□□□□ -0.63
CLPB-208ENST00000538021 ULBP3Q9BZM4 244 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 SCAND2PQ9GZW5 306 aaPredicted RBP11.13□□□□□ -0.63
CLPB-208ENST00000538021 TWSG1Q9GZX9 223 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 RAB6CQ9H0N0 254 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 RETREG1Q9H6L5 497 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 GOLGA6AQ9NYA3 693 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 DONSONQ9NYP3 566 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 PLEKHM1Q9Y4G2 1056 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms