RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 CD84Q9UIB8 345 aa14.28□□□□□ -0.12
UBE3B-206ENST00000536398 CSNK1G3Q9Y6M4 447 aa14.28□□□□□ -0.12
UBE3B-206ENST00000536398 hCG_1818297A0A087WSY0 165 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 A0A0J9YYE9 177 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 CASC3O15234 703 aaKnown RBP14.27□□□□□ -0.13
UBE3B-206ENST00000536398 ZRANB2O95218 330 aaKnown RBP eCLIP14.27□□□□□ -0.13
UBE3B-206ENST00000536398 TRBC1P01850 177 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 CAPNS1P04632 268 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 C1SP09871 688 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 ALPPL2P10696 532 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 CKMT1AP12532 417 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 HTR1BP28222 390 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 CDC25BP30305 580 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 TRIM23P36406 574 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 HK3P52790 923 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 EPHB1P54762 984 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 NAP1L1P55209 391 aaKnown RBP14.27□□□□□ -0.13
UBE3B-206ENST00000536398 CAMK2BQ13554 666 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 HS1BP3Q53T59 392 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 HES3Q5TGS1 186 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 LRRC66Q68CR7 880 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 ESRP1Q6NXG1 681 aaKnown RBP14.27□□□□□ -0.13
UBE3B-206ENST00000536398 USP45Q70EL2 814 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 KDELC2Q7Z4H8 507 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 TECPR1Q7Z6L1 1165 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 RCOR2Q8IZ40 523 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 FAM181AQ8N9Y4 354 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 KDF1Q8NAX2 398 aaPredicted RBP14.27□□□□□ -0.13
UBE3B-206ENST00000536398 HAUS1Q96CS2 278 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 DTD2Q96FN9 168 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 WDR92Q96MX6 357 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 RBM15Q96T37 977 aaKnown RBP eCLIP14.27□□□□□ -0.13
UBE3B-206ENST00000536398 SLC13A1Q9BZW2 595 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 BRD8Q9H0E9 1235 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 ABCG8Q9H221 673 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 C10orf88Q9H8K7 445 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 PCDH9Q9HC56 1237 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 LUC7LQ9NQ29 371 aaKnown RBP14.27□□□□□ -0.13
UBE3B-206ENST00000536398 KLQ9UEF7 1012 aa14.27□□□□□ -0.13
UBE3B-206ENST00000536398 GRID2IPA4D2P6 1211 aa14.26□□□□□ -0.13
UBE3B-206ENST00000536398 LMO7DNF2Z398 122 aa14.26□□□□□ -0.13
UBE3B-206ENST00000536398 PPP1R12AO14974 1030 aaPredicted RBP14.26□□□□□ -0.13
UBE3B-206ENST00000536398 CLDN7O95471 211 aa14.26□□□□□ -0.13
UBE3B-206ENST00000536398 FUCA1P04066 466 aa14.26□□□□□ -0.13
UBE3B-206ENST00000536398 PTPN3P26045 913 aa14.26□□□□□ -0.13
UBE3B-206ENST00000536398 KIAA1024LP59773 190 aa14.26□□□□□ -0.13
UBE3B-206ENST00000536398 INSM1Q01101 510 aaPredicted RBP14.26□□□□□ -0.13
UBE3B-206ENST00000536398 TARDBPQ13148 414 aaKnown RBP eCLIP14.26□□□□□ -0.13
UBE3B-206ENST00000536398 ARHGEF7Q14155 803 aa14.26□□□□□ -0.13
UBE3B-206ENST00000536398 TFDP2Q14188 446 aa14.26□□□□□ -0.13
UBE3B-206ENST00000536398 PRKD1Q15139 912 aaPredicted RBP14.26□□□□□ -0.13
UBE3B-206ENST00000536398 CDKN3Q16667 212 aa14.26□□□□□ -0.13
UBE3B-206ENST00000536398 QPCTQ16769 361 aa14.26□□□□□ -0.13
UBE3B-206ENST00000536398 TFDP3Q5H9I0 405 aa14.26□□□□□ -0.13
UBE3B-206ENST00000536398 AADACL2Q6P093 401 aa14.26□□□□□ -0.13
UBE3B-206ENST00000536398 CCDC50Q8IVM0 306 aa14.26□□□□□ -0.13
UBE3B-206ENST00000536398 GALNT15Q8N3T1 639 aa14.26□□□□□ -0.13
UBE3B-206ENST00000536398 OR56A4Q8NGH8 313 aa14.26□□□□□ -0.13
UBE3B-206ENST00000536398 EXD1Q8NHP7 514 aa14.26□□□□□ -0.13
UBE3B-206ENST00000536398 SPATA22Q8NHS9 363 aa14.26□□□□□ -0.13
UBE3B-206ENST00000536398 MDM1Q8TC05 714 aa14.26□□□□□ -0.13
UBE3B-206ENST00000536398 PTCD2Q8WV60 388 aaKnown RBP14.26□□□□□ -0.13
UBE3B-206ENST00000536398 SCAMP4Q969E2 229 aa14.26□□□□□ -0.13
UBE3B-206ENST00000536398 AGAP2Q99490 1192 aa14.26□□□□□ -0.13
UBE3B-206ENST00000536398 ANP32EQ9BTT0 268 aa14.26□□□□□ -0.13
UBE3B-206ENST00000536398 DUSP23Q9BVJ7 150 aa14.26□□□□□ -0.13
UBE3B-206ENST00000536398 WDR26Q9H7D7 661 aa14.26□□□□□ -0.13
UBE3B-206ENST00000536398 ZMIZ1Q9ULJ6 1067 aa14.26□□□□□ -0.13
UBE3B-206ENST00000536398 PCDHA3Q9Y5H8 950 aa14.26□□□□□ -0.13
UBE3B-206ENST00000536398 GOLGA4Q13439 2230 aaKnown RBP14.25□□□□□ -0.13
UBE3B-206ENST00000536398 EPG5Q9HCE0 2579 aa14.25□□□□□ -0.13
UBE3B-206ENST00000536398 CPED1A4D0V7 1026 aa14.25□□□□□ -0.13
UBE3B-206ENST00000536398 GOLGA6CA6NDK9 693 aa14.25□□□□□ -0.13
UBE3B-206ENST00000536398 GOLGA6BA6NDN3 693 aa14.25□□□□□ -0.13
UBE3B-206ENST00000536398 TRABD2BA6NFA1 517 aa14.25□□□□□ -0.13
UBE3B-206ENST00000536398 CAPN8A6NHC0 703 aa14.25□□□□□ -0.13
UBE3B-206ENST00000536398 BTNL10A8MVZ5 291 aa14.25□□□□□ -0.13
UBE3B-206ENST00000536398 F5H423 210 aaPredicted RBP14.25□□□□□ -0.13
UBE3B-206ENST00000536398 TAF4O00268 1085 aa14.25□□□□□ -0.13
UBE3B-206ENST00000536398 CACNB4O00305 520 aaPredicted RBP14.25□□□□□ -0.13
UBE3B-206ENST00000536398 TPP1O14773 563 aa14.25□□□□□ -0.13
UBE3B-206ENST00000536398 PJA2O43164 708 aa14.25□□□□□ -0.13
UBE3B-206ENST00000536398 KRT37O76014 449 aa14.25□□□□□ -0.13
UBE3B-206ENST00000536398 RASGRP1O95267 797 aa14.25□□□□□ -0.13
UBE3B-206ENST00000536398 IPO7O95373 1038 aaKnown RBP14.25□□□□□ -0.13
UBE3B-206ENST00000536398 MT-CYBP00156 380 aaPredicted RBP14.25□□□□□ -0.13
UBE3B-206ENST00000536398 ANXA6P08133 673 aa14.25□□□□□ -0.13
UBE3B-206ENST00000536398 HOXC4P09017 264 aaPredicted RBP14.25□□□□□ -0.13
UBE3B-206ENST00000536398 GOLGA6DP0CG33 693 aa14.25□□□□□ -0.13
UBE3B-206ENST00000536398 CTSEP14091 401 aa14.25□□□□□ -0.13
UBE3B-206ENST00000536398 JUPP14923 745 aa14.25□□□□□ -0.13
UBE3B-206ENST00000536398 CD68P34810 354 aaPredicted RBP14.25□□□□□ -0.13
UBE3B-206ENST00000536398 CTNNA1P35221 906 aaKnown RBP14.25□□□□□ -0.13
UBE3B-206ENST00000536398 VAV2P52735 878 aa14.25□□□□□ -0.13
UBE3B-206ENST00000536398 WASHC5Q12768 1159 aa14.25□□□□□ -0.13
UBE3B-206ENST00000536398 ILKQ13418 452 aa14.25□□□□□ -0.13
UBE3B-206ENST00000536398 GALNT3Q14435 633 aa14.25□□□□□ -0.13
UBE3B-206ENST00000536398 ZCCHC8Q6NZY4 707 aaKnown RBP14.25□□□□□ -0.13
UBE3B-206ENST00000536398 GUSBP11Q6P575 273 aa14.25□□□□□ -0.13
UBE3B-206ENST00000536398 KIAA1328Q86T90 577 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms