RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 GBE1Q04446 702 aa23.3■■□□□ 1.32
YIF1A-213ENST00000534374 SLC10A2Q12908 348 aaPredicted RBP23.3■■□□□ 1.32
YIF1A-213ENST00000534374 TBX2Q13207 712 aaPredicted RBP23.3■■□□□ 1.32
YIF1A-213ENST00000534374 ARHGEF7Q14155 803 aa23.3■■□□□ 1.32
YIF1A-213ENST00000534374 LRRC38Q5VT99 294 aa23.3■■□□□ 1.32
YIF1A-213ENST00000534374 OR1E3Q8WZA6 343 aa23.3■■□□□ 1.32
YIF1A-213ENST00000534374 FGF11Q92914 225 aa23.3■■□□□ 1.32
YIF1A-213ENST00000534374 HDAC11Q96DB2 347 aa23.3■■□□□ 1.32
YIF1A-213ENST00000534374 NUS1Q96E22 293 aa23.3■■□□□ 1.32
YIF1A-213ENST00000534374 DTD2Q96FN9 168 aa23.3■■□□□ 1.32
YIF1A-213ENST00000534374 SPTLC3Q9NUV7 552 aa23.3■■□□□ 1.32
YIF1A-213ENST00000534374 ITPR1Q14643 2758 aa23.29■■□□□ 1.32
YIF1A-213ENST00000534374 NPIPB15A6NHN6 443 aaPredicted RBP23.29■■□□□ 1.32
YIF1A-213ENST00000534374 CSO75390 466 aaKnown RBP23.29■■□□□ 1.32
YIF1A-213ENST00000534374 PDHA1P08559 390 aa23.29■■□□□ 1.32
YIF1A-213ENST00000534374 LHCGRP22888 699 aa23.29■■□□□ 1.32
YIF1A-213ENST00000534374 SLC1A1P43005 524 aa23.29■■□□□ 1.32
YIF1A-213ENST00000534374 ISXQ2M1V0 245 aa23.29■■□□□ 1.32
YIF1A-213ENST00000534374 C19orf48Q6RUI8 117 aa23.29■■□□□ 1.32
YIF1A-213ENST00000534374 SARM1Q6SZW1 724 aa23.29■■□□□ 1.32
YIF1A-213ENST00000534374 HSD11B1LQ7Z5J1 315 aa23.29■■□□□ 1.32
YIF1A-213ENST00000534374 NLRP8Q86W28 1048 aa23.29■■□□□ 1.32
YIF1A-213ENST00000534374 LSMEM2Q8N112 164 aa23.29■■□□□ 1.32
YIF1A-213ENST00000534374 OR6C4Q8NGE1 309 aa23.29■■□□□ 1.32
YIF1A-213ENST00000534374 HNRNPLLQ8WVV9 542 aaKnown RBP23.29■■□□□ 1.32
YIF1A-213ENST00000534374 PDXPQ96GD0 296 aa23.29■■□□□ 1.32
YIF1A-213ENST00000534374 LGR4Q9BXB1 951 aa23.29■■□□□ 1.32
YIF1A-213ENST00000534374 TEX101Q9BY14 249 aa23.29■■□□□ 1.32
YIF1A-213ENST00000534374 FGF22Q9HCT0 170 aa23.29■■□□□ 1.32
YIF1A-213ENST00000534374 DTLQ9NZJ0 730 aa23.29■■□□□ 1.32
YIF1A-213ENST00000534374 GULP1Q9UBP9 304 aa23.29■■□□□ 1.32
YIF1A-213ENST00000534374 GPR34Q9UPC5 381 aa23.29■■□□□ 1.32
YIF1A-213ENST00000534374 PCDHB1Q9Y5F3 818 aa23.29■■□□□ 1.32
YIF1A-213ENST00000534374 UNC13CQ8NB66 2214 aa23.29■■□□□ 1.32
YIF1A-213ENST00000534374 ARHGEF17Q96PE2 2063 aaPredicted RBP23.29■■□□□ 1.32
YIF1A-213ENST00000534374 LRP4O75096 1905 aa23.28■■□□□ 1.32
YIF1A-213ENST00000534374 BRINP1O60477 761 aa23.28■■□□□ 1.32
YIF1A-213ENST00000534374 MAP3K6O95382 1288 aa23.28■■□□□ 1.32
YIF1A-213ENST00000534374 MYCLP1P12525 358 aaPredicted RBP23.28■■□□□ 1.32
YIF1A-213ENST00000534374 ACTN2P35609 894 aa23.28■■□□□ 1.32
YIF1A-213ENST00000534374 EIF2S3P41091 472 aaKnown RBP23.28■■□□□ 1.32
YIF1A-213ENST00000534374 ETV3P41162 512 aa23.28■■□□□ 1.32
YIF1A-213ENST00000534374 LSSP48449 732 aa23.28■■□□□ 1.32
YIF1A-213ENST00000534374 RPL26P61254 145 aaKnown RBP23.28■■□□□ 1.32
YIF1A-213ENST00000534374 DPTQ07507 201 aa23.28■■□□□ 1.32
YIF1A-213ENST00000534374 PERM1Q5SV97 790 aa23.28■■□□□ 1.32
YIF1A-213ENST00000534374 OGFOD3Q6PK18 319 aa23.28■■□□□ 1.32
YIF1A-213ENST00000534374 NYAP1Q6ZVC0 841 aa23.28■■□□□ 1.32
YIF1A-213ENST00000534374 Q6ZVL8 140 aa23.28■■□□□ 1.32
YIF1A-213ENST00000534374 TECPR1Q7Z6L1 1165 aa23.28■■□□□ 1.32
YIF1A-213ENST00000534374 RAVER1Q8IY67 606 aaKnown RBP23.28■■□□□ 1.32
YIF1A-213ENST00000534374 CCDC13Q8IYE1 715 aa23.28■■□□□ 1.32
YIF1A-213ENST00000534374 PELI3Q8N2H9 469 aa23.28■■□□□ 1.32
YIF1A-213ENST00000534374 SNIP1Q8TAD8 396 aaKnown RBP23.28■■□□□ 1.32
YIF1A-213ENST00000534374 ARRDC2Q8TBH0 407 aa23.28■■□□□ 1.32
YIF1A-213ENST00000534374 ZNF830Q96NB3 372 aaPredicted RBP23.28■■□□□ 1.32
YIF1A-213ENST00000534374 PHPT1Q9NRX4 125 aaPredicted RBP23.28■■□□□ 1.32
YIF1A-213ENST00000534374 RPL26L1Q9UNX3 145 aaKnown RBP23.28■■□□□ 1.32
YIF1A-213ENST00000534374 A0A0J9YYE9 177 aa23.27■■□□□ 1.32
YIF1A-213ENST00000534374 LRRD1A4D1F6 860 aa23.27■■□□□ 1.32
YIF1A-213ENST00000534374 C3orf70A6NLC5 250 aaPredicted RBP23.27■■□□□ 1.32
YIF1A-213ENST00000534374 TLX3O43711 291 aaPredicted RBP23.27■■□□□ 1.32
YIF1A-213ENST00000534374 USP12O75317 370 aa23.27■■□□□ 1.32
YIF1A-213ENST00000534374 TRBC1P01850 177 aa23.27■■□□□ 1.32
YIF1A-213ENST00000534374 ZNF30P17039 623 aa23.27■■□□□ 1.32
YIF1A-213ENST00000534374 CA4P22748 312 aa23.27■■□□□ 1.32
YIF1A-213ENST00000534374 DSC2Q02487 901 aa23.27■■□□□ 1.32
YIF1A-213ENST00000534374 IHHQ14623 411 aa23.27■■□□□ 1.32
YIF1A-213ENST00000534374 COL28A1Q2UY09 1125 aa23.27■■□□□ 1.32
YIF1A-213ENST00000534374 DENND2CQ68D51 928 aa23.27■■□□□ 1.32
YIF1A-213ENST00000534374 KCTD16Q68DU8 428 aa23.27■■□□□ 1.32
YIF1A-213ENST00000534374 RBM44Q6ZP01 1051 aaKnown RBP23.27■■□□□ 1.32
YIF1A-213ENST00000534374 CCNYQ8ND76 341 aa23.27■■□□□ 1.32
YIF1A-213ENST00000534374 MAK16Q9BXY0 300 aaKnown RBP23.27■■□□□ 1.32
YIF1A-213ENST00000534374 MRPL40Q9NQ50 206 aaKnown RBP23.27■■□□□ 1.32
YIF1A-213ENST00000534374 DNPEPQ9ULA0 475 aa23.27■■□□□ 1.32
YIF1A-213ENST00000534374 BAHCC1Q9P281 2608 aa23.27■■□□□ 1.32
YIF1A-213ENST00000534374 DXOO77932 396 aaKnown RBP23.26■■□□□ 1.31
YIF1A-213ENST00000534374 ZFXP17010 805 aaPredicted RBP23.26■■□□□ 1.31
YIF1A-213ENST00000534374 CTPS1P17812 591 aa23.26■■□□□ 1.31
YIF1A-213ENST00000534374 EPHB1P54762 984 aa23.26■■□□□ 1.31
YIF1A-213ENST00000534374 PTSQ03393 145 aa23.26■■□□□ 1.31
YIF1A-213ENST00000534374 PPIDQ08752 370 aaKnown RBP23.26■■□□□ 1.31
YIF1A-213ENST00000534374 TBC1D25Q3MII6 688 aa23.26■■□□□ 1.31
YIF1A-213ENST00000534374 SLC9A4Q6AI14 798 aa23.26■■□□□ 1.31
YIF1A-213ENST00000534374 CRTC1Q6UUV9 634 aa23.26■■□□□ 1.31
YIF1A-213ENST00000534374 TAF8Q7Z7C8 310 aa23.26■■□□□ 1.31
YIF1A-213ENST00000534374 TSPAN33Q86UF1 283 aa23.26■■□□□ 1.31
YIF1A-213ENST00000534374 PLD5Q8N7P1 536 aa23.26■■□□□ 1.31
YIF1A-213ENST00000534374 GPR156Q8NFN8 814 aa23.26■■□□□ 1.31
YIF1A-213ENST00000534374 ZNF578Q96N58 590 aaPredicted RBP23.26■■□□□ 1.31
YIF1A-213ENST00000534374 CCDC3Q9BQI4 270 aa23.26■■□□□ 1.31
YIF1A-213ENST00000534374 ANP32EQ9BTT0 268 aa23.26■■□□□ 1.31
YIF1A-213ENST00000534374 TDRD1Q9BXT4 1180 aaKnown RBP23.26■■□□□ 1.31
YIF1A-213ENST00000534374 TMEM168Q9H0V1 697 aa23.26■■□□□ 1.31
YIF1A-213ENST00000534374 POLR1BQ9H9Y6 1135 aa23.26■■□□□ 1.31
YIF1A-213ENST00000534374 CYP4F12Q9HCS2 524 aa23.26■■□□□ 1.31
YIF1A-213ENST00000534374 FASNP49327 2511 aaKnown RBP23.26■■□□□ 1.31
YIF1A-213ENST00000534374 PRSS38A1L453 326 aa23.25■■□□□ 1.31
YIF1A-213ENST00000534374 RRP8O43159 456 aaKnown RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms