RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 ITGA2BP08514 1039 aa16.84■□□□□ 0.29
CPSF1-207ENST00000531727 CYP2A6P11509 494 aaPredicted RBP16.84■□□□□ 0.29
CPSF1-207ENST00000531727 MYCLP1P12525 358 aaPredicted RBP16.84■□□□□ 0.29
CPSF1-207ENST00000531727 GLB1P16278 677 aa16.84■□□□□ 0.29
CPSF1-207ENST00000531727 MMP13P45452 471 aa16.84■□□□□ 0.29
CPSF1-207ENST00000531727 MAXP61244 160 aa16.84■□□□□ 0.29
CPSF1-207ENST00000531727 ZBED6P86452 979 aa16.84■□□□□ 0.29
CPSF1-207ENST00000531727 CERCAMQ5T4B2 595 aa16.84■□□□□ 0.29
CPSF1-207ENST00000531727 MARC1Q5VT66 337 aa16.84■□□□□ 0.29
CPSF1-207ENST00000531727 LUZP1Q86V48 1076 aa16.84■□□□□ 0.29
CPSF1-207ENST00000531727 CCNJLQ8IV13 435 aa16.84■□□□□ 0.29
CPSF1-207ENST00000531727 CBARPQ8N350 705 aaPredicted RBP16.84■□□□□ 0.29
CPSF1-207ENST00000531727 NUP85Q9BW27 656 aa16.84■□□□□ 0.29
CPSF1-207ENST00000531727 STRADBQ9C0K7 418 aa16.84■□□□□ 0.29
CPSF1-207ENST00000531727 EPB41L5Q9HCM4 733 aa16.84■□□□□ 0.29
CPSF1-207ENST00000531727 RCOR3Q9P2K3 495 aaPredicted RBP16.84■□□□□ 0.29
CPSF1-207ENST00000531727 KIF26BQ2KJY2 2108 aa16.84■□□□□ 0.29
CPSF1-207ENST00000531727 A0A087X0T9 212 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 B4DGG1 531 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 ERVH48-1M5A8F1 160 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 PSMD11O00231 422 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 PLD2O14939 933 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 C1QL1O75973 258 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 PGLSO95336 258 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 FAM228BP0C875 321 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 PNLIPP16233 465 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 LHCGRP22888 699 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 INHBCP55103 352 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 UBASH3AP57075 661 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 C19orf57Q0VDD7 668 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 EIF3IQ13347 325 aaKnown RBP16.83■□□□□ 0.28
CPSF1-207ENST00000531727 HLTFQ14527 1009 aaKnown RBP eCLIP16.83■□□□□ 0.28
CPSF1-207ENST00000531727 KRT81Q14533 505 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 C14orf28Q4W4Y0 310 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 ARHGAP40Q5TG30 622 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 DENND2CQ68D51 928 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 SPECC1LQ69YQ0 1117 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 RAB11FIP2Q7L804 512 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 HSD11B1LQ7Z5J1 315 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 HEATR4Q86WZ0 1026 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 FBXO39Q8N4B4 442 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 CCL4L1Q8NHW4 92 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 IQCDQ96DY2 449 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 DTD2Q96FN9 168 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 SCRN2Q96FV2 425 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 TMEM74Q96NL1 305 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 MCCC1Q96RQ3 725 aaPredicted RBP16.83■□□□□ 0.28
CPSF1-207ENST00000531727 TEX101Q9BY14 249 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 FOXP3Q9BZS1 431 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 DPEP2Q9H4A9 486 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 PHPT1Q9NRX4 125 aaPredicted RBP16.83■□□□□ 0.28
CPSF1-207ENST00000531727 MOSPD1Q9UJG1 213 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 CAPN11Q9UMQ6 739 aa16.83■□□□□ 0.28
CPSF1-207ENST00000531727 SYCE3A1L190 88 aa16.82■□□□□ 0.28
CPSF1-207ENST00000531727 NPIPB15A6NHN6 443 aaPredicted RBP16.82■□□□□ 0.28
CPSF1-207ENST00000531727 MYO1FO00160 1098 aa16.82■□□□□ 0.28
CPSF1-207ENST00000531727 IL4RP24394 825 aa16.82■□□□□ 0.28
CPSF1-207ENST00000531727 CCKBRP32239 447 aa16.82■□□□□ 0.28
CPSF1-207ENST00000531727 ETV3P41162 512 aa16.82■□□□□ 0.28
CPSF1-207ENST00000531727 RHDQ02161 417 aa16.82■□□□□ 0.28
CPSF1-207ENST00000531727 VAC14Q08AM6 782 aa16.82■□□□□ 0.28
CPSF1-207ENST00000531727 MMRN1Q13201 1228 aa16.82■□□□□ 0.28
CPSF1-207ENST00000531727 NFKBIBQ15653 356 aa16.82■□□□□ 0.28
CPSF1-207ENST00000531727 ARMC12Q5T9G4 340 aa16.82■□□□□ 0.28
CPSF1-207ENST00000531727 PCSK4Q6UW60 755 aa16.82■□□□□ 0.28
CPSF1-207ENST00000531727 USP45Q70EL2 814 aa16.82■□□□□ 0.28
CPSF1-207ENST00000531727 LRRC49Q8IUZ0 686 aa16.82■□□□□ 0.28
CPSF1-207ENST00000531727 SFTPA2Q8IWL1 248 aa16.82■□□□□ 0.28
CPSF1-207ENST00000531727 TEX26Q8N6G2 289 aa16.82■□□□□ 0.28
CPSF1-207ENST00000531727 Q8N9G6 341 aaPredicted RBP16.82■□□□□ 0.28
CPSF1-207ENST00000531727 FAM71BQ8TC56 605 aa16.82■□□□□ 0.28
CPSF1-207ENST00000531727 KIAA1524Q8TCG1 905 aa16.82■□□□□ 0.28
CPSF1-207ENST00000531727 SNRNP27Q8WVK2 155 aaKnown RBP16.82■□□□□ 0.28
CPSF1-207ENST00000531727 FRMD8Q9BZ67 464 aaPredicted RBP16.82■□□□□ 0.28
CPSF1-207ENST00000531727 NT5MQ9NPB1 228 aa16.82■□□□□ 0.28
CPSF1-207ENST00000531727 LRIT1Q9P2V4 623 aa16.82■□□□□ 0.28
CPSF1-207ENST00000531727 PPIL1Q9Y3C6 166 aa16.82■□□□□ 0.28
CPSF1-207ENST00000531727 RNF215Q9Y6U7 377 aa16.82■□□□□ 0.28
CPSF1-207ENST00000531727 NUDT21O43809 227 aaKnown RBP16.81■□□□□ 0.28
CPSF1-207ENST00000531727 MFSD11O43934 449 aa16.81■□□□□ 0.28
CPSF1-207ENST00000531727 CEACAM5P06731 702 aa16.81■□□□□ 0.28
CPSF1-207ENST00000531727 CD48P09326 243 aa16.81■□□□□ 0.28
CPSF1-207ENST00000531727 CCNB1P14635 433 aa16.81■□□□□ 0.28
CPSF1-207ENST00000531727 TEAD1P28347 426 aa16.81■□□□□ 0.28
CPSF1-207ENST00000531727 UGT1A5P35504 534 aa16.81■□□□□ 0.28
CPSF1-207ENST00000531727 SSR1P43307 286 aaKnown RBP16.81■□□□□ 0.28
CPSF1-207ENST00000531727 ARSEP51690 589 aa16.81■□□□□ 0.28
CPSF1-207ENST00000531727 ARHGEF7Q14155 803 aa16.81■□□□□ 0.28
CPSF1-207ENST00000531727 HADHQ16836 314 aaKnown RBP16.81■□□□□ 0.28
CPSF1-207ENST00000531727 ALKBH5Q6P6C2 394 aaKnown RBP16.81■□□□□ 0.28
CPSF1-207ENST00000531727 Q6ZVL8 140 aa16.81■□□□□ 0.28
CPSF1-207ENST00000531727 SPRED1Q7Z699 444 aa16.81■□□□□ 0.28
CPSF1-207ENST00000531727 TSPAN33Q86UF1 283 aa16.81■□□□□ 0.28
CPSF1-207ENST00000531727 NRROSQ86YC3 692 aa16.81■□□□□ 0.28
CPSF1-207ENST00000531727 GPBAR1Q8TDU6 330 aa16.81■□□□□ 0.28
CPSF1-207ENST00000531727 CPLX3Q8WVH0 158 aa16.81■□□□□ 0.28
CPSF1-207ENST00000531727 PIH1D2Q8WWB5 315 aa16.81■□□□□ 0.28
CPSF1-207ENST00000531727 WBP1Q96G27 269 aa16.81■□□□□ 0.28
CPSF1-207ENST00000531727 CARS2Q9HA77 564 aaKnown RBP16.81■□□□□ 0.28
CPSF1-207ENST00000531727 ATXN7L1Q9ULK2 861 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms