RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 RFTN1Q14699 578 aaPredicted RBP11.57□□□□□ -0.56
CMTM1-211ENST00000528484 NR1D2Q14995 579 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 CAMK4Q16566 473 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 SKIDA1Q1XH10 827 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 RAB6CQ53S08 254 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 PNCKQ6P2M8 343 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 DNAJC24Q6P3W2 148 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 LIPIQ6XZB0 460 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 DPPA4Q7L190 304 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 TMPRSS9Q7Z410 1059 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 ZNF438Q7Z4V0 828 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 ATCAYQ86WG3 371 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 PYROXD2Q8N2H3 581 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 C3orf20Q8ND61 904 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 CCL4L1Q8NHW4 92 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 SLC30A5Q8TAD4 765 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 SLC20A1Q8WUM9 679 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 NUS1Q96E22 293 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 NAA15Q9BXJ9 866 aaKnown RBP11.57□□□□□ -0.56
CMTM1-211ENST00000528484 KLC2Q9H0B6 622 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 RAB6CQ9H0N0 254 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 STN1Q9H668 368 aaKnown RBP11.57□□□□□ -0.56
CMTM1-211ENST00000528484 NOL6Q9H6R4 1146 aaKnown RBP11.57□□□□□ -0.56
CMTM1-211ENST00000528484 GPN2Q9H9Y4 310 aaPredicted RBP11.57□□□□□ -0.56
CMTM1-211ENST00000528484 SEPT11Q9NVA2 429 aaKnown RBP11.57□□□□□ -0.56
CMTM1-211ENST00000528484 GOLGA6AQ9NYA3 693 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 KCNK4Q9NYG8 393 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 TAAR2Q9P1P5 351 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 NBASA2RRP1 2371 aa11.56□□□□□ -0.56
CMTM1-211ENST00000528484 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.56□□□□□ -0.56
CMTM1-211ENST00000528484 B4E171 279 aa11.56□□□□□ -0.56
CMTM1-211ENST00000528484 BUB1BO60566 1050 aaPredicted RBP11.56□□□□□ -0.56
CMTM1-211ENST00000528484 PRAMEF11O60813 436 aa11.56□□□□□ -0.56
CMTM1-211ENST00000528484 FGF3P11487 239 aaPredicted RBP11.56□□□□□ -0.56
CMTM1-211ENST00000528484 MAP4P27816 1152 aaKnown RBP11.56□□□□□ -0.56
CMTM1-211ENST00000528484 RFC1P35251 1148 aaPredicted RBP11.56□□□□□ -0.56
CMTM1-211ENST00000528484 TSPAN7P41732 249 aa11.56□□□□□ -0.56
CMTM1-211ENST00000528484 ZNF143P52747 638 aaPredicted RBP11.56□□□□□ -0.56
CMTM1-211ENST00000528484 AP1S1P61966 158 aa11.56□□□□□ -0.56
CMTM1-211ENST00000528484 FOXK1P85037 733 aa11.56□□□□□ -0.56
CMTM1-211ENST00000528484 NSUN2Q08J23 767 aaKnown RBP eCLIP11.56□□□□□ -0.56
CMTM1-211ENST00000528484 HSP90AA4PQ58FG1 418 aa11.56□□□□□ -0.56
CMTM1-211ENST00000528484 MIIPQ5JXC2 388 aa11.56□□□□□ -0.56
CMTM1-211ENST00000528484 AFMIDQ63HM1 303 aa11.56□□□□□ -0.56
CMTM1-211ENST00000528484 DCUN1D2Q6PH85 259 aa11.56□□□□□ -0.56
CMTM1-211ENST00000528484 WDR59Q6PJI9 974 aa11.56□□□□□ -0.56
CMTM1-211ENST00000528484 SLC30A9Q6PML9 568 aa11.56□□□□□ -0.56
CMTM1-211ENST00000528484 KDELC2Q7Z4H8 507 aa11.56□□□□□ -0.56
CMTM1-211ENST00000528484 HEATR4Q86WZ0 1026 aa11.56□□□□□ -0.56
CMTM1-211ENST00000528484 LURAP1LQ8IV03 231 aa11.56□□□□□ -0.56
CMTM1-211ENST00000528484 TSEN2Q8NCE0 465 aaKnown RBP11.56□□□□□ -0.56
CMTM1-211ENST00000528484 SLC45A3Q96JT2 553 aa11.56□□□□□ -0.56
CMTM1-211ENST00000528484 SPENQ96T58 3664 aaKnown RBP11.56□□□□□ -0.56
CMTM1-211ENST00000528484 SLC38A3Q99624 504 aa11.56□□□□□ -0.56
CMTM1-211ENST00000528484 ZPBPQ9BS86 351 aa11.56□□□□□ -0.56
CMTM1-211ENST00000528484 SPATS2LQ9NUQ6 558 aaKnown RBP11.56□□□□□ -0.56
CMTM1-211ENST00000528484 B3GALT1Q9Y5Z6 326 aa11.56□□□□□ -0.56
CMTM1-211ENST00000528484 SIGLEC16A6NMB1 481 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 EFCAB7A8K855 629 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 A8MX80 341 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 EIF3CLB5ME19 914 aaKnown RBP11.55□□□□□ -0.56
CMTM1-211ENST00000528484 J3KR12 359 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 CCP110O43303 1012 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 DUX1O43812 170 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 GADD45BO75293 160 aaPredicted RBP11.55□□□□□ -0.56
CMTM1-211ENST00000528484 FGF1P05230 155 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 PRKAR1AP10644 381 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 THRAP10827 490 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 CYP2A6P11509 494 aaPredicted RBP11.55□□□□□ -0.56
CMTM1-211ENST00000528484 CR2P20023 1033 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 EEF1GP26641 437 aaKnown RBP11.55□□□□□ -0.56
CMTM1-211ENST00000528484 CD1CP29017 333 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 SOX5P35711 763 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 SCNN1BP51168 640 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 GSCP56915 257 aaPredicted RBP11.55□□□□□ -0.56
CMTM1-211ENST00000528484 FMO1Q01740 532 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 RALGDSQ12967 914 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 DENND2CQ68D51 928 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 KCTD16Q68DU8 428 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 RAET1GQ6H3X3 334 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 TMEM71Q6P5X7 295 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 CEACAM20Q6UY09 585 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 NYAP1Q6ZVC0 841 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 ZSWIM9Q86XI8 627 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 SFTPA2Q8IWL1 248 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 NLGN4XQ8N0W4 816 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 BBS5Q8N3I7 341 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 FAM26EQ8N5C1 309 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 NLGN4YQ8NFZ3 816 aaPredicted RBP11.55□□□□□ -0.56
CMTM1-211ENST00000528484 OR10G6Q8NH81 332 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 PDCD6IPQ8WUM4 868 aaKnown RBP11.55□□□□□ -0.56
CMTM1-211ENST00000528484 APOBEC4Q8WW27 367 aaKnown RBP11.55□□□□□ -0.56
CMTM1-211ENST00000528484 CELF6Q96J87 481 aaKnown RBP11.55□□□□□ -0.56
CMTM1-211ENST00000528484 MCEEQ96PE7 176 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 EIF3CQ99613 913 aaKnown RBP11.55□□□□□ -0.56
CMTM1-211ENST00000528484 CNPY3Q9BT09 278 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 LGR4Q9BXB1 951 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 MAGEB5Q9BZ81 275 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 TRIT1Q9H3H1 467 aaKnown RBP11.55□□□□□ -0.56
CMTM1-211ENST00000528484 LRRC19Q9H756 370 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms