RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 NDC1Q9BTX1 674 aa6.92□□□□□ -1.3
VPS26B-204ENST00000527586 MMTAG2Q9BU76 263 aaKnown RBP6.92□□□□□ -1.3
VPS26B-204ENST00000527586 DUSP16Q9BY84 665 aa6.92□□□□□ -1.3
VPS26B-204ENST00000527586 AGXT2Q9BYV1 514 aa6.92□□□□□ -1.3
VPS26B-204ENST00000527586 AMBRA1Q9C0C7 1298 aa6.92□□□□□ -1.3
VPS26B-204ENST00000527586 XYLT2Q9H1B5 865 aa6.92□□□□□ -1.3
VPS26B-204ENST00000527586 CHST8Q9H2A9 424 aa6.92□□□□□ -1.3
VPS26B-204ENST00000527586 ZSCAN16Q9H4T2 348 aaPredicted RBP6.92□□□□□ -1.3
VPS26B-204ENST00000527586 SLC24A3Q9HC58 644 aa6.92□□□□□ -1.3
VPS26B-204ENST00000527586 RASSF1Q9NS23 344 aa6.92□□□□□ -1.3
VPS26B-204ENST00000527586 ADGRE2Q9UHX3 823 aa6.92□□□□□ -1.3
VPS26B-204ENST00000527586 VPS28Q9UK41 221 aa6.92□□□□□ -1.3
VPS26B-204ENST00000527586 HS3ST2Q9Y278 367 aa6.92□□□□□ -1.3
VPS26B-204ENST00000527586 COQ6Q9Y2Z9 468 aa6.92□□□□□ -1.3
VPS26B-204ENST00000527586 LUC7L2Q9Y383 392 aaKnown RBP6.92□□□□□ -1.3
VPS26B-204ENST00000527586 TRBV23OR9-2A0A075B6M9 112 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 TTC24A2A3L6 582 aaPredicted RBP6.91□□□□□ -1.3
VPS26B-204ENST00000527586 TRIM64A6NGJ6 449 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 TRIM64BA6NI03 449 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 CACNB4O00305 520 aaPredicted RBP6.91□□□□□ -1.3
VPS26B-204ENST00000527586 ZNF202O95125 648 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 MOCS2O96007 188 aaPredicted RBP6.91□□□□□ -1.3
VPS26B-204ENST00000527586 PCCBP05166 539 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 TPOP07202 933 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 EGR1P18146 543 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 ATICP31939 592 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 OTX2P32243 289 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 TKTL1P51854 596 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 EVCP57679 992 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 TFF3Q07654 80 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 STK3Q13188 491 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 PCBP2Q15366 365 aaKnown RBP eCLIP6.91□□□□□ -1.3
VPS26B-204ENST00000527586 ZACNQ401N2 412 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 LRRC73Q5JTD7 316 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 BSPRYQ5W0U4 402 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 RAP1GAP2Q684P5 730 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 CXorf57Q6NSI4 855 aaKnown RBP6.91□□□□□ -1.3
VPS26B-204ENST00000527586 SPOCD1Q6ZMY3 1216 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 RAB43Q86YS6 212 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 ZZZ3Q8IYH5 903 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 GPD1LQ8N335 351 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 VWA5B2Q8N398 1253 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 TAB3Q8N5C8 712 aaPredicted RBP6.91□□□□□ -1.3
VPS26B-204ENST00000527586 IGSF22Q8N9C0 903 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 CATSPER1Q8NEC5 780 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 OR1N1Q8NGS0 311 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 ARHGEF26Q96DR7 871 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 C9orf72Q96LT7 481 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 PPP1R9BQ96SB3 815 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 HEPHQ9BQS7 1158 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 WRAP53Q9BUR4 548 aaKnown RBP6.91□□□□□ -1.3
VPS26B-204ENST00000527586 RAB34Q9BZG1 259 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 ULBP1Q9BZM6 244 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 ST6GALNAC4Q9H4F1 302 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 CARS2Q9HA77 564 aaKnown RBP6.91□□□□□ -1.3
VPS26B-204ENST00000527586 COQ3Q9NZJ6 369 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 HS3ST4Q9Y661 456 aa6.91□□□□□ -1.3
VPS26B-204ENST00000527586 INTS1Q8N201 2190 aaKnown RBP6.91□□□□□ -1.3
VPS26B-204ENST00000527586 ZNF233A6NK53 670 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 FAM90A27PA6NNH2 459 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 TNFRSF10CO14798 259 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 AREL1O15033 823 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 SNAP91O60641 907 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 RAB40ALP0C0E4 278 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 RARAP10276 462 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 DLATP10515 647 aaKnown RBP6.9□□□□□ -1.3
VPS26B-204ENST00000527586 UNGP13051 313 aaPredicted RBP6.9□□□□□ -1.3
VPS26B-204ENST00000527586 TNNI1P19237 187 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 ITIH2P19823 946 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 TACR2P21452 398 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 KELP23276 732 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 GFERP55789 205 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 KIAA1024LP59773 190 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 NFATC2Q13469 925 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 TSR1Q2NL82 804 aaKnown RBP6.9□□□□□ -1.3
VPS26B-204ENST00000527586 RAB41Q5JT25 222 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 PM20D1Q6GTS8 502 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 LCN10Q6JVE6 187 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 C22orf39Q6P5X5 142 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 BLOC1S2Q6QNY1 142 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 IGFL2Q6UWQ7 119 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 ZNF720Q7Z2F6 126 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 MRGPREQ86SM8 312 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 PIGZQ86VD9 579 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 UNC93AQ86WB7 457 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 GPBP1Q86WP2 473 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 CHSY1Q86X52 802 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 HIPK1Q86Z02 1210 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 CBWD2Q8IUF1 395 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 PLXDC1Q8IUK5 500 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 P3H2Q8IVL5 708 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 DIS3L2Q8IYB7 885 aaKnown RBP6.9□□□□□ -1.3
VPS26B-204ENST00000527586 OR52K2Q8NGK3 314 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 ROBO4Q8WZ75 1007 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 SHC3Q92529 594 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 WASF1Q92558 559 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 FUBP1Q96AE4 644 aaKnown RBP6.9□□□□□ -1.3
VPS26B-204ENST00000527586 SH3KBP1Q96B97 665 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 MAGED4Q96JG8 741 aa6.9□□□□□ -1.3
VPS26B-204ENST00000527586 JAKMIP1Q96N16 626 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms