RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ANKRD11Q6UB99 2663 aaPredicted RBP20.72■□□□□ 0.91
SDCBP-209ENST00000522243 A0A1W2PNU3 283 aaPredicted RBP20.71■□□□□ 0.91
SDCBP-209ENST00000522243 CBFA2T2O43439 604 aa20.71■□□□□ 0.91
SDCBP-209ENST00000522243 AKR1B10O60218 316 aa20.71■□□□□ 0.91
SDCBP-209ENST00000522243 NFKBIAP25963 317 aa20.71■□□□□ 0.91
SDCBP-209ENST00000522243 DSC2Q02487 901 aa20.71■□□□□ 0.91
SDCBP-209ENST00000522243 SPIDRQ14159 915 aa20.71■□□□□ 0.91
SDCBP-209ENST00000522243 MESDQ14696 234 aa20.71■□□□□ 0.91
SDCBP-209ENST00000522243 PDK2Q15119 407 aa20.71■□□□□ 0.91
SDCBP-209ENST00000522243 SKOR2Q2VWA4 1001 aaPredicted RBP20.71■□□□□ 0.91
SDCBP-209ENST00000522243 SOWAHCQ53LP3 525 aaPredicted RBP20.71■□□□□ 0.91
SDCBP-209ENST00000522243 Q6ZVL8 140 aa20.71■□□□□ 0.91
SDCBP-209ENST00000522243 LRRC49Q8IUZ0 686 aa20.71■□□□□ 0.91
SDCBP-209ENST00000522243 LSMEM2Q8N112 164 aa20.71■□□□□ 0.91
SDCBP-209ENST00000522243 SDR16C5Q8N3Y7 309 aa20.71■□□□□ 0.91
SDCBP-209ENST00000522243 RNF214Q8ND24 703 aa20.71■□□□□ 0.91
SDCBP-209ENST00000522243 FAM46DQ8NEK8 389 aa20.71■□□□□ 0.91
SDCBP-209ENST00000522243 PIH1D2Q8WWB5 315 aa20.71■□□□□ 0.91
SDCBP-209ENST00000522243 DTD2Q96FN9 168 aa20.71■□□□□ 0.91
SDCBP-209ENST00000522243 CHP1Q99653 195 aa20.71■□□□□ 0.91
SDCBP-209ENST00000522243 ZNF670Q9BS34 389 aa20.71■□□□□ 0.91
SDCBP-209ENST00000522243 TTLL3Q9Y4R7 772 aa20.71■□□□□ 0.91
SDCBP-209ENST00000522243 KIF26BQ2KJY2 2108 aa20.71■□□□□ 0.91
SDCBP-209ENST00000522243 PMS2P1A4D2B8 440 aa20.7■□□□□ 0.9
SDCBP-209ENST00000522243 TNFRSF10CO14798 259 aa20.7■□□□□ 0.9
SDCBP-209ENST00000522243 HOXC4P09017 264 aaPredicted RBP20.7■□□□□ 0.9
SDCBP-209ENST00000522243 CCL7P80098 99 aa20.7■□□□□ 0.9
SDCBP-209ENST00000522243 TRIM14Q14142 442 aa20.7■□□□□ 0.9
SDCBP-209ENST00000522243 IHHQ14623 411 aa20.7■□□□□ 0.9
SDCBP-209ENST00000522243 IFI16Q16666 785 aaKnown RBP20.7■□□□□ 0.9
SDCBP-209ENST00000522243 TIGD7Q6NT04 549 aaPredicted RBP20.7■□□□□ 0.9
SDCBP-209ENST00000522243 RFLNAQ6ZTI6 216 aa20.7■□□□□ 0.9
SDCBP-209ENST00000522243 USP45Q70EL2 814 aa20.7■□□□□ 0.9
SDCBP-209ENST00000522243 HEATR4Q86WZ0 1026 aa20.7■□□□□ 0.9
SDCBP-209ENST00000522243 CBARPQ8N350 705 aaPredicted RBP20.7■□□□□ 0.9
SDCBP-209ENST00000522243 PQLC3Q8N755 202 aa20.7■□□□□ 0.9
SDCBP-209ENST00000522243 RAPGEF5Q92565 580 aa20.7■□□□□ 0.9
SDCBP-209ENST00000522243 SCRN2Q96FV2 425 aa20.7■□□□□ 0.9
SDCBP-209ENST00000522243 ZNF578Q96N58 590 aaPredicted RBP20.7■□□□□ 0.9
SDCBP-209ENST00000522243 LGMNQ99538 433 aa20.7■□□□□ 0.9
SDCBP-209ENST00000522243 DNAJC7Q99615 494 aa20.7■□□□□ 0.9
SDCBP-209ENST00000522243 POLR1EQ9GZS1 481 aaKnown RBP20.7■□□□□ 0.9
SDCBP-209ENST00000522243 RBM22Q9NW64 420 aaKnown RBP eCLIP20.7■□□□□ 0.9
SDCBP-209ENST00000522243 ZNHIT6Q9NWK9 470 aaKnown RBP20.7■□□□□ 0.9
SDCBP-209ENST00000522243 CD84Q9UIB8 345 aa20.7■□□□□ 0.9
SDCBP-209ENST00000522243 SSU72P8A0A1W2PR75 194 aa20.69■□□□□ 0.9
SDCBP-209ENST00000522243 PRSS38A1L453 326 aa20.69■□□□□ 0.9
SDCBP-209ENST00000522243 B4DGG1 531 aa20.69■□□□□ 0.9
SDCBP-209ENST00000522243 NTN3O00634 580 aaPredicted RBP20.69■□□□□ 0.9
SDCBP-209ENST00000522243 MATN3O15232 486 aa20.69■□□□□ 0.9
SDCBP-209ENST00000522243 TCEA3O75764 348 aa20.69■□□□□ 0.9
SDCBP-209ENST00000522243 KRT7P08729 469 aa20.69■□□□□ 0.9
SDCBP-209ENST00000522243 TMEM253P0C7T8 217 aa20.69■□□□□ 0.9
SDCBP-209ENST00000522243 MYCLP1P12525 358 aaPredicted RBP20.69■□□□□ 0.9
SDCBP-209ENST00000522243 GBE1Q04446 702 aa20.69■□□□□ 0.9
SDCBP-209ENST00000522243 SLC10A2Q12908 348 aaPredicted RBP20.69■□□□□ 0.9
SDCBP-209ENST00000522243 RAET1GQ6H3X3 334 aa20.69■□□□□ 0.9
SDCBP-209ENST00000522243 MAP7D3Q8IWC1 876 aa20.69■□□□□ 0.9
SDCBP-209ENST00000522243 SPACA3Q8IXA5 215 aa20.69■□□□□ 0.9
SDCBP-209ENST00000522243 GPR156Q8NFN8 814 aa20.69■□□□□ 0.9
SDCBP-209ENST00000522243 WDR48Q8TAF3 677 aa20.69■□□□□ 0.9
SDCBP-209ENST00000522243 MAML1Q92585 1016 aa20.69■□□□□ 0.9
SDCBP-209ENST00000522243 BBC3Q96PG8 261 aaPredicted RBP20.69■□□□□ 0.9
SDCBP-209ENST00000522243 MCCC1Q96RQ3 725 aaPredicted RBP20.69■□□□□ 0.9
SDCBP-209ENST00000522243 TSPY26PQ9H489 355 aa20.69■□□□□ 0.9
SDCBP-209ENST00000522243 CARS2Q9HA77 564 aaKnown RBP20.69■□□□□ 0.9
SDCBP-209ENST00000522243 ASCL3Q9NQ33 180 aa20.69■□□□□ 0.9
SDCBP-209ENST00000522243 PHPT1Q9NRX4 125 aaPredicted RBP20.69■□□□□ 0.9
SDCBP-209ENST00000522243 SPTLC3Q9NUV7 552 aa20.69■□□□□ 0.9
SDCBP-209ENST00000522243 CHKBQ9Y259 395 aa20.69■□□□□ 0.9
SDCBP-209ENST00000522243 PPIL1Q9Y3C6 166 aa20.69■□□□□ 0.9
SDCBP-209ENST00000522243 CACNA1GO43497 2377 aa20.68■□□□□ 0.9
SDCBP-209ENST00000522243 PSMD11O00231 422 aa20.68■□□□□ 0.9
SDCBP-209ENST00000522243 PDE2AO00408 941 aaPredicted RBP20.68■□□□□ 0.9
SDCBP-209ENST00000522243 FZD6O60353 706 aa20.68■□□□□ 0.9
SDCBP-209ENST00000522243 NOBOXO60393 691 aa20.68■□□□□ 0.9
SDCBP-209ENST00000522243 DXOO77932 396 aaKnown RBP20.68■□□□□ 0.9
SDCBP-209ENST00000522243 FUCA1P04066 466 aa20.68■□□□□ 0.9
SDCBP-209ENST00000522243 HLA-DQB2P05538 268 aa20.68■□□□□ 0.9
SDCBP-209ENST00000522243 KDELR1P24390 212 aa20.68■□□□□ 0.9
SDCBP-209ENST00000522243 CCNCP24863 283 aa20.68■□□□□ 0.9
SDCBP-209ENST00000522243 PDX1P52945 283 aa20.68■□□□□ 0.9
SDCBP-209ENST00000522243 PCBP4P57723 403 aaKnown RBP20.68■□□□□ 0.9
SDCBP-209ENST00000522243 CDK3Q00526 305 aa20.68■□□□□ 0.9
SDCBP-209ENST00000522243 TSR1Q2NL82 804 aaKnown RBP20.68■□□□□ 0.9
SDCBP-209ENST00000522243 FAM182AQ5T1J6 154 aa20.68■□□□□ 0.9
SDCBP-209ENST00000522243 LRRC66Q68CR7 880 aa20.68■□□□□ 0.9
SDCBP-209ENST00000522243 VSTM4Q8IW00 320 aa20.68■□□□□ 0.9
SDCBP-209ENST00000522243 Q8N9G6 341 aaPredicted RBP20.68■□□□□ 0.9
SDCBP-209ENST00000522243 ZNF248Q8NDW4 579 aa20.68■□□□□ 0.9
SDCBP-209ENST00000522243 SLC35G2Q8TBE7 412 aa20.68■□□□□ 0.9
SDCBP-209ENST00000522243 PTCD2Q8WV60 388 aaKnown RBP20.68■□□□□ 0.9
SDCBP-209ENST00000522243 FAF2Q96CS3 445 aa20.68■□□□□ 0.9
SDCBP-209ENST00000522243 TEX101Q9BY14 249 aa20.68■□□□□ 0.9
SDCBP-209ENST00000522243 DPEP2Q9H4A9 486 aa20.68■□□□□ 0.9
SDCBP-209ENST00000522243 PRORYQ9H606 182 aa20.68■□□□□ 0.9
SDCBP-209ENST00000522243 ABHD10Q9NUJ1 306 aa20.68■□□□□ 0.9
SDCBP-209ENST00000522243 A0A1W2PQM1 296 aa20.67■□□□□ 0.9
SDCBP-209ENST00000522243 RPLP0P05388 317 aaKnown RBP20.67■□□□□ 0.9
SDCBP-209ENST00000522243 CEACAM5P06731 702 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms