RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 NOMO1Q15155 1222 aa20.66■□□□□ 0.9
TRIM35-203ENST00000521253 ESRP1Q6NXG1 681 aaKnown RBP20.66■□□□□ 0.9
TRIM35-203ENST00000521253 PNCKQ6P2M8 343 aa20.66■□□□□ 0.9
TRIM35-203ENST00000521253 Q6ZVL8 140 aa20.66■□□□□ 0.9
TRIM35-203ENST00000521253 RAB44Q7Z6P3 723 aaPredicted RBP20.66■□□□□ 0.9
TRIM35-203ENST00000521253 CHCHD4Q8N4Q1 142 aa20.66■□□□□ 0.9
TRIM35-203ENST00000521253 UBL4BQ8N7F7 174 aa20.66■□□□□ 0.9
TRIM35-203ENST00000521253 FUBP1Q96AE4 644 aaKnown RBP20.66■□□□□ 0.9
TRIM35-203ENST00000521253 TADA1Q96BN2 335 aa20.66■□□□□ 0.9
TRIM35-203ENST00000521253 GRPEL1Q9HAV7 217 aa20.66■□□□□ 0.9
TRIM35-203ENST00000521253 HACD1B0YJ81 288 aa20.65■□□□□ 0.9
TRIM35-203ENST00000521253 SCAMP1O15126 338 aa20.65■□□□□ 0.9
TRIM35-203ENST00000521253 DDX3YO15523 660 aaKnown RBP20.65■□□□□ 0.9
TRIM35-203ENST00000521253 MTSS1O43312 755 aa20.65■□□□□ 0.9
TRIM35-203ENST00000521253 SIGLEC6O43699 453 aa20.65■□□□□ 0.9
TRIM35-203ENST00000521253 HTR1BP28222 390 aa20.65■□□□□ 0.9
TRIM35-203ENST00000521253 CD68P34810 354 aaPredicted RBP20.65■□□□□ 0.9
TRIM35-203ENST00000521253 TRIM23P36406 574 aa20.65■□□□□ 0.9
TRIM35-203ENST00000521253 OTUD4Q01804 1114 aaKnown RBP20.65■□□□□ 0.9
TRIM35-203ENST00000521253 PTSQ03393 145 aa20.65■□□□□ 0.9
TRIM35-203ENST00000521253 DNAJC3Q13217 504 aa20.65■□□□□ 0.9
TRIM35-203ENST00000521253 ZNF211Q13398 564 aaPredicted RBP20.65■□□□□ 0.9
TRIM35-203ENST00000521253 XRCC4Q13426 336 aa20.65■□□□□ 0.9
TRIM35-203ENST00000521253 QPCTQ16769 361 aa20.65■□□□□ 0.9
TRIM35-203ENST00000521253 RFLNAQ6ZTI6 216 aa20.65■□□□□ 0.9
TRIM35-203ENST00000521253 NYAP1Q6ZVC0 841 aa20.65■□□□□ 0.9
TRIM35-203ENST00000521253 TECPR1Q7Z6L1 1165 aa20.65■□□□□ 0.9
TRIM35-203ENST00000521253 PHACTR4Q8IZ21 702 aa20.65■□□□□ 0.9
TRIM35-203ENST00000521253 OR4C6Q8NH72 309 aa20.65■□□□□ 0.9
TRIM35-203ENST00000521253 SPATA22Q8NHS9 363 aa20.65■□□□□ 0.9
TRIM35-203ENST00000521253 ACTL9Q8TC94 416 aa20.65■□□□□ 0.9
TRIM35-203ENST00000521253 HTR3CQ8WXA8 447 aa20.65■□□□□ 0.9
TRIM35-203ENST00000521253 ADAMTS14Q8WXS8 1223 aa20.65■□□□□ 0.9
TRIM35-203ENST00000521253 TRIB3Q96RU7 358 aa20.65■□□□□ 0.9
TRIM35-203ENST00000521253 SCNM1Q9BWG6 230 aa20.65■□□□□ 0.9
TRIM35-203ENST00000521253 KCTD5Q9NXV2 234 aa20.65■□□□□ 0.9
TRIM35-203ENST00000521253 APOBEC3BQ9UH17 382 aaKnown RBP20.65■□□□□ 0.9
TRIM35-203ENST00000521253 GUCA1BQ9UMX6 200 aa20.65■□□□□ 0.9
TRIM35-203ENST00000521253 ARID1BQ8NFD5 2236 aaPredicted RBP20.65■□□□□ 0.9
TRIM35-203ENST00000521253 FRYQ5TBA9 3013 aa20.64■□□□□ 0.9
TRIM35-203ENST00000521253 NEMP2A6NFY4 417 aa20.64■□□□□ 0.89
TRIM35-203ENST00000521253 H7C0C1 242 aa20.64■□□□□ 0.89
TRIM35-203ENST00000521253 AQP9O43315 295 aa20.64■□□□□ 0.89
TRIM35-203ENST00000521253 KRT86O43790 486 aa20.64■□□□□ 0.89
TRIM35-203ENST00000521253 MT-CYBP00156 380 aaPredicted RBP20.64■□□□□ 0.89
TRIM35-203ENST00000521253 ZNF30P17039 623 aa20.64■□□□□ 0.89
TRIM35-203ENST00000521253 CETN2P41208 172 aa20.64■□□□□ 0.89
TRIM35-203ENST00000521253 ATP5OP48047 213 aa20.64■□□□□ 0.89
TRIM35-203ENST00000521253 CCZ1BP86790 482 aa20.64■□□□□ 0.89
TRIM35-203ENST00000521253 CCZ1P86791 482 aaPredicted RBP20.64■□□□□ 0.89
TRIM35-203ENST00000521253 PPARDQ03181 441 aa20.64■□□□□ 0.89
TRIM35-203ENST00000521253 GALNT3Q14435 633 aa20.64■□□□□ 0.89
TRIM35-203ENST00000521253 PCSK7Q16549 785 aa20.64■□□□□ 0.89
TRIM35-203ENST00000521253 ALG11Q2TAA5 492 aa20.64■□□□□ 0.89
TRIM35-203ENST00000521253 PROX2Q3B8N5 592 aa20.64■□□□□ 0.89
TRIM35-203ENST00000521253 CCDC157Q569K6 752 aa20.64■□□□□ 0.89
TRIM35-203ENST00000521253 FAXCQ5TGI0 409 aa20.64■□□□□ 0.89
TRIM35-203ENST00000521253 ENPP7Q6UWV6 458 aa20.64■□□□□ 0.89
TRIM35-203ENST00000521253 KDELC2Q7Z4H8 507 aa20.64■□□□□ 0.89
TRIM35-203ENST00000521253 LMX1AQ8TE12 382 aa20.64■□□□□ 0.89
TRIM35-203ENST00000521253 BTN2A2Q8WVV5 523 aa20.64■□□□□ 0.89
TRIM35-203ENST00000521253 HES6Q96HZ4 224 aa20.64■□□□□ 0.89
TRIM35-203ENST00000521253 LYSMD1Q96S90 227 aa20.64■□□□□ 0.89
TRIM35-203ENST00000521253 MLPHQ9BV36 600 aaPredicted RBP20.64■□□□□ 0.89
TRIM35-203ENST00000521253 ADGRE3Q9BY15 652 aa20.64■□□□□ 0.89
TRIM35-203ENST00000521253 WDR26Q9H7D7 661 aa20.64■□□□□ 0.89
TRIM35-203ENST00000521253 C10orf88Q9H8K7 445 aa20.64■□□□□ 0.89
TRIM35-203ENST00000521253 NLGN3Q9NZ94 848 aa20.64■□□□□ 0.89
TRIM35-203ENST00000521253 KLHL8Q9P2G9 620 aaPredicted RBP20.64■□□□□ 0.89
TRIM35-203ENST00000521253 DNPEPQ9ULA0 475 aa20.64■□□□□ 0.89
TRIM35-203ENST00000521253 COL5A1P20908 1838 aaPredicted RBP20.64■□□□□ 0.89
TRIM35-203ENST00000521253 ACACBO00763 2458 aa20.64■□□□□ 0.89
TRIM35-203ENST00000521253 TPRP12270 2363 aaKnown RBP20.64■□□□□ 0.89
TRIM35-203ENST00000521253 ANKRD66B4E2M5 251 aa20.63■□□□□ 0.89
TRIM35-203ENST00000521253 CACNB4O00305 520 aaPredicted RBP20.63■□□□□ 0.89
TRIM35-203ENST00000521253 TJP3O95049 919 aa20.63■□□□□ 0.89
TRIM35-203ENST00000521253 CLDN7O95471 211 aa20.63■□□□□ 0.89
TRIM35-203ENST00000521253 HOXC4P09017 264 aaPredicted RBP20.63■□□□□ 0.89
TRIM35-203ENST00000521253 C1SP09871 688 aa20.63■□□□□ 0.89
TRIM35-203ENST00000521253 ALPPL2P10696 532 aa20.63■□□□□ 0.89
TRIM35-203ENST00000521253 NFKB1P19838 968 aa20.63■□□□□ 0.89
TRIM35-203ENST00000521253 RBL1P28749 1068 aa20.63■□□□□ 0.89
TRIM35-203ENST00000521253 STC1P52823 247 aa20.63■□□□□ 0.89
TRIM35-203ENST00000521253 KIAA1024LP59773 190 aa20.63■□□□□ 0.89
TRIM35-203ENST00000521253 SLC14A2Q15849 920 aa20.63■□□□□ 0.89
TRIM35-203ENST00000521253 PRRT3Q5FWE3 981 aa20.63■□□□□ 0.89
TRIM35-203ENST00000521253 KCTD16Q68DU8 428 aa20.63■□□□□ 0.89
TRIM35-203ENST00000521253 HID1Q8IV36 788 aa20.63■□□□□ 0.89
TRIM35-203ENST00000521253 ZNF567Q8N184 647 aa20.63■□□□□ 0.89
TRIM35-203ENST00000521253 TSACCQ96A04 125 aaPredicted RBP20.63■□□□□ 0.89
TRIM35-203ENST00000521253 WDR92Q96MX6 357 aa20.63■□□□□ 0.89
TRIM35-203ENST00000521253 VAT1Q99536 393 aa20.63■□□□□ 0.89
TRIM35-203ENST00000521253 FAM118BQ9BPY3 351 aa20.63■□□□□ 0.89
TRIM35-203ENST00000521253 LRRC61Q9BV99 259 aa20.63■□□□□ 0.89
TRIM35-203ENST00000521253 LGR4Q9BXB1 951 aa20.63■□□□□ 0.89
TRIM35-203ENST00000521253 SLC13A1Q9BZW2 595 aa20.63■□□□□ 0.89
TRIM35-203ENST00000521253 UBP1Q9NZI7 540 aa20.63■□□□□ 0.89
TRIM35-203ENST00000521253 SPASTQ9UBP0 616 aa20.63■□□□□ 0.89
TRIM35-203ENST00000521253 KLQ9UEF7 1012 aa20.63■□□□□ 0.89
TRIM35-203ENST00000521253 CD84Q9UIB8 345 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms