RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 ANKRD36A6QL64 1941 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 CPED1A4D0V7 1026 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 LRRD1A4D1F6 860 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 NPIPB15A6NHN6 443 aaPredicted RBP9.35□□□□□ -0.91
HDAC3-215ENST00000519474 VGLL3A8MV65 326 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 KCNK1O00180 336 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 TNFRSF10CO14798 259 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 RASGRP1O95267 797 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 CPP00450 1065 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 HLA-DQB2P05538 268 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 ANXA6P08133 673 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 MMP2P08253 660 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 ALPIP09923 528 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 CYP2A6P11509 494 aaPredicted RBP9.35□□□□□ -0.91
HDAC3-215ENST00000519474 TNNT1P13805 278 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 CTSEP14091 401 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 MX2P20592 715 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 TGM2P21980 687 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 HTR1BP28222 390 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 ETV3P41162 512 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 NOP2P46087 812 aaKnown RBP9.35□□□□□ -0.91
HDAC3-215ENST00000519474 PPIDQ08752 370 aaKnown RBP9.35□□□□□ -0.91
HDAC3-215ENST00000519474 RTP5Q14D33 572 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 TAZQ16635 292 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 CDKN3Q16667 212 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 PERM1Q5SV97 790 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 DENND2CQ68D51 928 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 ESRP1Q6NXG1 681 aaKnown RBP9.35□□□□□ -0.91
HDAC3-215ENST00000519474 GUSBP11Q6P575 273 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 LVRNQ6Q4G3 990 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 NLRP8Q86W28 1048 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 VSIG1Q86XK7 387 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 RHOT1Q8IXI2 618 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 DCBLD1Q8N8Z6 715 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 OR1E3Q8WZA6 343 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 WDR92Q96MX6 357 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 TEX101Q9BY14 249 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 POLR1EQ9GZS1 481 aaKnown RBP9.35□□□□□ -0.91
HDAC3-215ENST00000519474 ABCG8Q9H221 673 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 USP29Q9HBJ7 922 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 MRPL40Q9NQ50 206 aaKnown RBP9.35□□□□□ -0.91
HDAC3-215ENST00000519474 PADI4Q9UM07 663 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 CLCA2Q9UQC9 943 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 HEY1Q9Y5J3 304 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 DGKBQ9Y6T7 804 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 SHROOM3Q8TF72 1996 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 ASXL3Q9C0F0 2248 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 MYLKQ15746 1914 aa9.35□□□□□ -0.91
HDAC3-215ENST00000519474 A0A0J9YYE9 177 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 RCCD1A6NED2 376 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 PSMD11O00231 422 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 APOL1O14791 398 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 CASC3O15234 703 aaKnown RBP9.34□□□□□ -0.91
HDAC3-215ENST00000519474 CLDN7O95471 211 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 TRBC1P01850 177 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 CEACAM5P06731 702 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 GP1BAP07359 652 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 KRT10P13645 584 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 FECHP22830 423 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 CDKN2BP42772 138 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 KIAA1024LP59773 190 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 SKOR1P84550 965 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 ADCY2Q08462 1091 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 ZBTB17Q13105 803 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 LLGL1Q15334 1064 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 ELOCQ15369 112 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 C6orf132Q5T0Z8 1188 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 SLC35F3Q8IY50 421 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 FSTL5Q8N475 847 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-215ENST00000519474 OR56A4Q8NGH8 313 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 IFI44Q8TCB0 444 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 DTD2Q96FN9 168 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 MRFAP1L1Q96HT8 127 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 OLFM3Q96PB7 478 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 PANX2Q96RD6 677 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 WDR24Q96S15 920 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 RBM15Q96T37 977 aaKnown RBP eCLIP9.34□□□□□ -0.913e-6■■■■□ 20.8
HDAC3-215ENST00000519474 PAIP2Q9BPZ3 127 aaKnown RBP9.34□□□□□ -0.91
HDAC3-215ENST00000519474 NRSN2Q9GZP1 204 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 TMEM168Q9H0V1 697 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 GOLPH3Q9H4A6 298 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 FGF22Q9HCT0 170 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 KCTD5Q9NXV2 234 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 DDX56Q9NY93 547 aaKnown RBP9.34□□□□□ -0.91
HDAC3-215ENST00000519474 SAE1Q9UBE0 346 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-215ENST00000519474 GULP1Q9UBP9 304 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 KLQ9UEF7 1012 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 DUSP10Q9Y6W6 482 aa9.34□□□□□ -0.91
HDAC3-215ENST00000519474 MAP1BP46821 2468 aaKnown RBP9.33□□□□□ -0.92
HDAC3-215ENST00000519474 A0A0A6YYK5 440 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-215ENST00000519474 ANKRD66B4E2M5 251 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 CACNB4O00305 520 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-215ENST00000519474 PDE2AO00408 941 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-215ENST00000519474 ZFXP17010 805 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-215ENST00000519474 POLD2P49005 469 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 IFI35P80217 286 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-215ENST00000519474 DPTQ07507 201 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 AP1B1Q10567 949 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 ARHGEF7Q14155 803 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 NR0B2Q15466 257 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms