RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 DTD2Q96FN9 168 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 GFM1Q96RP9 751 aaKnown RBP13.33□□□□□ -0.28
PFDN1-206ENST00000514611 EPB41L5Q9HCM4 733 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 IP6K2Q9UHH9 426 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 ASXL3Q9C0F0 2248 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 ATMQ13315 3056 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 GOLGA6CA6NDK9 693 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 GOLGA6BA6NDN3 693 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 AGRPO00253 132 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 PGLSO95336 258 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 CYP1A2P05177 515 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 HOXC4P09017 264 aaPredicted RBP13.32□□□□□ -0.28
PFDN1-206ENST00000514611 GOLGA6DP0CG33 693 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 MYCLP1P12525 358 aaPredicted RBP13.32□□□□□ -0.28
PFDN1-206ENST00000514611 HGFP14210 728 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 CTPS1P17812 591 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 KELP23276 732 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 IL4RP24394 825 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 SSR1P43307 286 aaKnown RBP13.32□□□□□ -0.28
PFDN1-206ENST00000514611 TPM4P67936 248 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 ZBED6P86452 979 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 HLTFQ14527 1009 aaKnown RBP eCLIP13.32□□□□□ -0.28
PFDN1-206ENST00000514611 NFKBIBQ15653 356 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 C14orf28Q4W4Y0 310 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 CERCAMQ5T4B2 595 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 MARC1Q5VT66 337 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 NCBP2-AS2Q69YL0 99 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 SPECC1LQ69YQ0 1117 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 CCNJLQ8IV13 435 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 BBS5Q8N3I7 341 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 ARL14Q8N4G2 192 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 Q8N9G6 341 aaPredicted RBP13.32□□□□□ -0.28
PFDN1-206ENST00000514611 NSMCE1Q8WV22 266 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 SYN2Q92777 582 aaPredicted RBP13.32□□□□□ -0.28
PFDN1-206ENST00000514611 LIN37Q96GY3 246 aaPredicted RBP13.32□□□□□ -0.28
PFDN1-206ENST00000514611 SMIM14Q96QK8 99 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 LRRN3Q9H3W5 708 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 DPEP2Q9H4A9 486 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 CARS2Q9HA77 564 aaKnown RBP13.32□□□□□ -0.28
PFDN1-206ENST00000514611 NT5MQ9NPB1 228 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 GOLGA6AQ9NYA3 693 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 ATXN7L1Q9ULK2 861 aaPredicted RBP13.32□□□□□ -0.28
PFDN1-206ENST00000514611 CAPN11Q9UMQ6 739 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 PHTF1Q9UMS5 762 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 BZW2Q9Y6E2 419 aaKnown RBP13.32□□□□□ -0.28
PFDN1-206ENST00000514611 RNF215Q9Y6U7 377 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 BAHCC1Q9P281 2608 aa13.32□□□□□ -0.28
PFDN1-206ENST00000514611 MGAQ8IWI9 3026 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 A0A1W2PQ67 120 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 TNFRSF10CO14798 259 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 PLD2O14939 933 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 FUCA1P04066 466 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 ITGA2BP08514 1039 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 PDHA1P08559 390 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 GLB1P16278 677 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 ARSEP51690 589 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 INHBCP55103 352 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 MAZP56270 477 aaKnown RBP13.31□□□□□ -0.28
PFDN1-206ENST00000514611 CDK3Q00526 305 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 DPYSL3Q14195 570 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 ATP13A4Q4VNC1 1196 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 CCDC122Q5T0U0 273 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 ARMC12Q5T9G4 340 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 RAET1GQ6H3X3 334 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 ALKBH5Q6P6C2 394 aaKnown RBP13.31□□□□□ -0.28
PFDN1-206ENST00000514611 OGFOD3Q6PK18 319 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 RFLNAQ6ZTI6 216 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 Q6ZVL8 140 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 SPRED1Q7Z699 444 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 CLEC14AQ86T13 490 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.31□□□□□ -0.28
PFDN1-206ENST00000514611 OR6C4Q8NGE1 309 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 ZNF564Q8TBZ8 553 aaPredicted RBP13.31□□□□□ -0.28
PFDN1-206ENST00000514611 FAM71BQ8TC56 605 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 LRRN4Q8WUT4 740 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 DPH1Q9BZG8 443 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 IFNKQ9P0W0 207 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 CD84Q9UIB8 345 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 NENFQ9UMX5 172 aa13.31□□□□□ -0.28
PFDN1-206ENST00000514611 PTPRQQ9UMZ3 2332 aa13.3□□□□□ -0.28
PFDN1-206ENST00000514611 RP1P56715 2156 aa13.3□□□□□ -0.28
PFDN1-206ENST00000514611 MYO1FO00160 1098 aa13.3□□□□□ -0.28
PFDN1-206ENST00000514611 SOD1P00441 154 aa13.3□□□□□ -0.28
PFDN1-206ENST00000514611 CEACAM5P06731 702 aa13.3□□□□□ -0.28
PFDN1-206ENST00000514611 CYP2A6P11509 494 aaPredicted RBP13.3□□□□□ -0.28
PFDN1-206ENST00000514611 CCNB1P14635 433 aa13.3□□□□□ -0.28
PFDN1-206ENST00000514611 AK4P27144 223 aaPredicted RBP13.3□□□□□ -0.28
PFDN1-206ENST00000514611 UGT1A5P35504 534 aa13.3□□□□□ -0.28
PFDN1-206ENST00000514611 GARSP41250 739 aaKnown RBP13.3□□□□□ -0.28
PFDN1-206ENST00000514611 GNPDA1P46926 289 aa13.3□□□□□ -0.28
PFDN1-206ENST00000514611 UCNP55089 124 aa13.3□□□□□ -0.28
PFDN1-206ENST00000514611 TAS2R40P59535 323 aa13.3□□□□□ -0.28
PFDN1-206ENST00000514611 GALNT2Q10471 571 aa13.3□□□□□ -0.28
PFDN1-206ENST00000514611 CLN3Q13286 438 aa13.3□□□□□ -0.28
PFDN1-206ENST00000514611 ARHGEF7Q14155 803 aa13.3□□□□□ -0.28
PFDN1-206ENST00000514611 IHHQ14623 411 aa13.3□□□□□ -0.28
PFDN1-206ENST00000514611 LRRC66Q68CR7 880 aa13.3□□□□□ -0.28
PFDN1-206ENST00000514611 USP45Q70EL2 814 aa13.3□□□□□ -0.28
PFDN1-206ENST00000514611 RAB11FIP2Q7L804 512 aa13.3□□□□□ -0.28
PFDN1-206ENST00000514611 TMPRSS9Q7Z410 1059 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms