RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 ARNTP27540 789 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 CRABP2P29373 138 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 CRHR1P34998 444 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 SERPINB8P50452 374 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 IL9RQ01113 521 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 PFKPQ01813 784 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 CCDC15Q0P6D6 951 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 ZNF234Q14588 700 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 CCDC85BQ15834 202 aaPredicted RBP16.01■□□□□ 0.15
NUP54-214ENST00000514307 INSCQ1MX18 579 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 HHATQ5VTY9 493 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 FAM46CQ5VWP2 391 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 LYPLAL1Q5VWZ2 237 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 ZNF470Q6ECI4 717 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 CCDC91Q7Z6B0 441 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 TTC7BQ86TV6 843 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 LCA5Q86VQ0 697 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 ZC3HC1Q86WB0 502 aaKnown RBP16.01■□□□□ 0.15
NUP54-214ENST00000514307 RALGPS2Q86X27 583 aaPredicted RBP16.01■□□□□ 0.15
NUP54-214ENST00000514307 C4orf33Q8N1A6 199 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 SLC44A3Q8N4M1 653 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 MDM1Q8TC05 714 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 TSPAN17Q96FV3 270 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 VPS39Q96JC1 886 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 SERAC1Q96JX3 654 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 TSNARE1Q96NA8 513 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 TMEM245Q9H330 911 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 INTS10Q9NVR2 710 aaKnown RBP16.01■□□□□ 0.15
NUP54-214ENST00000514307 IL1RAPL1Q9NZN1 696 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 LIMD1Q9UGP4 676 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 WASF2Q9Y6W5 498 aa16.01■□□□□ 0.15
NUP54-214ENST00000514307 C1orf232A0A0U1RR37 186 aa16■□□□□ 0.15
NUP54-214ENST00000514307 ARNTLO00327 626 aa16■□□□□ 0.15
NUP54-214ENST00000514307 AURKAO14965 403 aa16■□□□□ 0.15
NUP54-214ENST00000514307 TYROBPO43914 113 aa16■□□□□ 0.15
NUP54-214ENST00000514307 RNASEH1O60930 286 aaKnown RBP16■□□□□ 0.15
NUP54-214ENST00000514307 SPAG7O75391 227 aa16■□□□□ 0.15
NUP54-214ENST00000514307 NDUFS3O75489 264 aa16■□□□□ 0.15
NUP54-214ENST00000514307 LEFTY1O75610 366 aa16■□□□□ 0.15
NUP54-214ENST00000514307 S1PR4O95977 384 aa16■□□□□ 0.15
NUP54-214ENST00000514307 GSTA1P08263 222 aa16■□□□□ 0.15
NUP54-214ENST00000514307 ZNF30P17039 623 aa16■□□□□ 0.15
NUP54-214ENST00000514307 TTPAP49638 278 aa16■□□□□ 0.15
NUP54-214ENST00000514307 ARSDP51689 593 aa16■□□□□ 0.15
NUP54-214ENST00000514307 CLCN5P51795 746 aa16■□□□□ 0.15
NUP54-214ENST00000514307 GNGT1P63211 74 aa16■□□□□ 0.15
NUP54-214ENST00000514307 POU4F1Q01851 419 aa16■□□□□ 0.15
NUP54-214ENST00000514307 BMPR2Q13873 1038 aa16■□□□□ 0.15
NUP54-214ENST00000514307 ARHGEF7Q14155 803 aa16■□□□□ 0.15
NUP54-214ENST00000514307 ELAVL3Q14576 367 aaKnown RBP16■□□□□ 0.15
NUP54-214ENST00000514307 USP10Q14694 798 aaKnown RBP16■□□□□ 0.15
NUP54-214ENST00000514307 AAK1Q2M2I8 961 aa16■□□□□ 0.15
NUP54-214ENST00000514307 C9orf64Q5T6V5 341 aa16■□□□□ 0.15
NUP54-214ENST00000514307 RNF187Q5TA31 235 aaPredicted RBP16■□□□□ 0.15
NUP54-214ENST00000514307 ERAP2Q6P179 960 aa16■□□□□ 0.15
NUP54-214ENST00000514307 CERS6Q6ZMG9 384 aa16■□□□□ 0.15
NUP54-214ENST00000514307 SH2D5Q6ZV89 423 aa16■□□□□ 0.15
NUP54-214ENST00000514307 CILP2Q8IUL8 1156 aa16■□□□□ 0.15
NUP54-214ENST00000514307 DCLK2Q8N568 766 aa16■□□□□ 0.15
NUP54-214ENST00000514307 ANKRD42Q8N9B4 389 aa16■□□□□ 0.15
NUP54-214ENST00000514307 OR13C4Q8NGS5 318 aa16■□□□□ 0.15
NUP54-214ENST00000514307 DNASE1L2Q92874 299 aa16■□□□□ 0.15
NUP54-214ENST00000514307 PPP1R16AQ96I34 528 aa16■□□□□ 0.15
NUP54-214ENST00000514307 MCCC1Q96RQ3 725 aaPredicted RBP16■□□□□ 0.15
NUP54-214ENST00000514307 CDX2Q99626 313 aaPredicted RBP16■□□□□ 0.15
NUP54-214ENST00000514307 GPR22Q99680 433 aa16■□□□□ 0.15
NUP54-214ENST00000514307 DYRK4Q9NR20 520 aa16■□□□□ 0.15
NUP54-214ENST00000514307 MKS1Q9NXB0 559 aa16■□□□□ 0.15
NUP54-214ENST00000514307 ANKRD6Q9Y2G4 727 aa16■□□□□ 0.15
NUP54-214ENST00000514307 MTO1Q9Y2Z2 717 aaKnown RBP16■□□□□ 0.15
NUP54-214ENST00000514307 DOCK6Q96HP0 2047 aa16■□□□□ 0.15
NUP54-214ENST00000514307 MYO9BQ13459 2157 aa15.99■□□□□ 0.15
NUP54-214ENST00000514307 TSPAN11A1L157 253 aa15.99■□□□□ 0.15
NUP54-214ENST00000514307 HMX2A2RU54 273 aa15.99■□□□□ 0.15
NUP54-214ENST00000514307 RGSL1A5PLK6 1076 aa15.99■□□□□ 0.15
NUP54-214ENST00000514307 GOLGA8CPA6NN73 597 aa15.99■□□□□ 0.15
NUP54-214ENST00000514307 FOXO6A8MYZ6 492 aa15.99■□□□□ 0.15
NUP54-214ENST00000514307 C1QTNF3-AMACRE9PGA6 284 aa15.99■□□□□ 0.15
NUP54-214ENST00000514307 GOLGA8RI6L899 631 aa15.99■□□□□ 0.15
NUP54-214ENST00000514307 HAUS5O94927 633 aa15.99■□□□□ 0.15
NUP54-214ENST00000514307 PRKCGP05129 697 aa15.99■□□□□ 0.15
NUP54-214ENST00000514307 ALPIP09923 528 aa15.99■□□□□ 0.15
NUP54-214ENST00000514307 COL6A2P12110 1019 aa15.99■□□□□ 0.15
NUP54-214ENST00000514307 TIMP2P16035 220 aa15.99■□□□□ 0.15
NUP54-214ENST00000514307 CREB1P16220 341 aa15.99■□□□□ 0.15
NUP54-214ENST00000514307 SLC1A2P43004 574 aa15.99■□□□□ 0.15
NUP54-214ENST00000514307 GUCY1A3Q02108 690 aa15.99■□□□□ 0.15
NUP54-214ENST00000514307 CACNG1Q06432 222 aa15.99■□□□□ 0.15
NUP54-214ENST00000514307 GPR33Q49SQ1 333 aa15.99■□□□□ 0.15
NUP54-214ENST00000514307 CRTC1Q6UUV9 634 aa15.99■□□□□ 0.15
NUP54-214ENST00000514307 LYSMD3Q7Z3D4 306 aa15.99■□□□□ 0.15
NUP54-214ENST00000514307 TAX1BP1Q86VP1 789 aa15.99■□□□□ 0.15
NUP54-214ENST00000514307 DENND6AQ8IWF6 608 aa15.99■□□□□ 0.15
NUP54-214ENST00000514307 RAVER1Q8IY67 606 aaKnown RBP15.99■□□□□ 0.15
NUP54-214ENST00000514307 GRIN3AQ8TCU5 1115 aa15.99■□□□□ 0.15
NUP54-214ENST00000514307 DENND1AQ8TEH3 1009 aa15.99■□□□□ 0.15
NUP54-214ENST00000514307 MYLIPQ8WY64 445 aa15.99■□□□□ 0.15
NUP54-214ENST00000514307 MSANTD3Q96H12 275 aa15.99■□□□□ 0.15
NUP54-214ENST00000514307 APOPT1Q96IL0 206 aa15.99■□□□□ 0.15
NUP54-214ENST00000514307 MCMBPQ9BTE3 642 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 213 ms