RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 SLC17A9Q9BYT1 436 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 GPR63Q9BZJ6 419 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 CASS4Q9NQ75 786 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 SMG5Q9UPR3 1016 aaKnown RBP11.34□□□□□ -0.59
HTT-213ENST00000513806 ARIH1Q9Y4X5 557 aaPredicted RBP11.34□□□□□ -0.59
HTT-213ENST00000513806 GPR179Q6PRD1 2367 aa11.34□□□□□ -0.59
HTT-213ENST00000513806 LRP4O75096 1905 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 WDR87Q6ZQQ6 2873 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 A0A1W2PQ67 120 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 GOLGA6CA6NDK9 693 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 GOLGA6BA6NDN3 693 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 EFCAB8A8MWE9 144 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 PATE3B3GLJ2 98 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 K7ESM1 405 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 GPR39O43194 453 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 PSMD3O43242 534 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 TM7SF2O76062 418 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 RECQL5O94762 991 aaPredicted RBP11.33□□□□□ -0.6
HTT-213ENST00000513806 SUN1O94901 812 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 WNT1P04628 370 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 PCCBP05166 539 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 GOLGA6DP0CG33 693 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 TPSB2P20231 275 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 MGAT1P26572 445 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 CA5AP35218 305 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 IGFALSP35858 605 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 STC1P52823 247 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 ITGA8P53708 1063 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 RPL26P61254 145 aaKnown RBP11.33□□□□□ -0.6
HTT-213ENST00000513806 RPS21P63220 83 aaKnown RBP11.33□□□□□ -0.6
HTT-213ENST00000513806 CREB5Q02930 508 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 CCDC15Q0P6D6 951 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 ARHGEF7Q14155 803 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 TPSAB1Q15661 275 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 LYSMD4Q5XG99 296 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 KIAA1161Q6NSJ0 714 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 C8orf74Q6P047 294 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 GLT6D1Q7Z4J2 308 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 CAND1Q86VP6 1230 aaKnown RBP11.33□□□□□ -0.6
HTT-213ENST00000513806 TRIM69Q86WT6 500 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 NDUFAF2Q8N183 169 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 AGGF1Q8N302 714 aaeCLIP11.33□□□□□ -0.61e-23■■■■■ 126.7
HTT-213ENST00000513806 MMGT1Q8N4V1 131 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 NAT8LQ8N9F0 302 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 DNAAF3Q8N9W5 541 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 OR13C4Q8NGS5 318 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 SPOCK2Q92563 424 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 SCAMP4Q969E2 229 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 LRRC45Q96CN5 670 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 COQ10AQ96MF6 247 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 RUNDC3BQ96NL0 473 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 EPC1Q9H2F5 836 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 ARRDC1-AS1Q9H2J1 176 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 ZFYVE1Q9HBF4 777 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 RRAGDQ9NQL2 400 aaPredicted RBP11.33□□□□□ -0.6
HTT-213ENST00000513806 SYBUQ9NX95 663 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 GOLGA6AQ9NYA3 693 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 DMGDHQ9UI17 866 aaKnown RBP11.33□□□□□ -0.6
HTT-213ENST00000513806 TPX2Q9ULW0 747 aaKnown RBP11.33□□□□□ -0.6
HTT-213ENST00000513806 RPL26L1Q9UNX3 145 aaKnown RBP11.33□□□□□ -0.6
HTT-213ENST00000513806 HCN4Q9Y3Q4 1203 aa11.33□□□□□ -0.6
HTT-213ENST00000513806 A0A1W2PPC4 97 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 POM121BA6NF01 834 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 FAM187AA6NFU0 413 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 TP73O15350 636 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 LATO43561 262 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 RHOBTB1O94844 696 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 EPOP01588 193 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 CNR2P34972 360 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 CCR5P51681 352 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 SGCGQ13326 291 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 TUBB2AQ13885 445 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 IRF4Q15306 451 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 ELF2Q15723 593 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 WSCD2Q2TBF2 565 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 MSS51Q4VC12 460 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 HP1BP3Q5SSJ5 553 aaPredicted RBP11.32□□□□□ -0.6
HTT-213ENST00000513806 TPRG1LQ5T0D9 272 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 FNBP1LQ5T0N5 605 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 TCEAL6Q6IPX3 200 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 NAPEPLDQ6IQ20 393 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 ZC3H14Q6PJT7 736 aaKnown RBP11.32□□□□□ -0.6
HTT-213ENST00000513806 CES3Q6UWW8 571 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 C4orf22Q6V702 233 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 GCNT7Q6ZNI0 430 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 SYDE1Q6ZW31 735 aaPredicted RBP11.32□□□□□ -0.6
HTT-213ENST00000513806 TMC3Q7Z5M5 1100 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 TECPR1Q7Z6L1 1165 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 PPIL6Q8IXY8 311 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 CBARPQ8N350 705 aaPredicted RBP11.32□□□□□ -0.6
HTT-213ENST00000513806 CEP112Q8N8E3 955 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 PNPLA1Q8N8W4 532 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 SUMF1Q8NBK3 374 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 TP53I13Q8NBR0 393 aaPredicted RBP11.32□□□□□ -0.6
HTT-213ENST00000513806 CADM4Q8NFZ8 388 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 TCEAL3Q969E4 200 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 NUS1Q96E22 293 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 SERAC1Q96JX3 654 aa11.32□□□□□ -0.6
HTT-213ENST00000513806 ZC3H10Q96K80 434 aaKnown RBP11.32□□□□□ -0.6
HTT-213ENST00000513806 ZNF778Q96MU6 729 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms