RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 PIGNO95427 931 aa13.94□□□□□ -0.18
SPCS3-204ENST00000513139 LSM8O95777 96 aaKnown RBP13.94□□□□□ -0.18
SPCS3-204ENST00000513139 PLEKP08567 350 aaPredicted RBP13.94□□□□□ -0.18
SPCS3-204ENST00000513139 PRKAR1AP10644 381 aa13.94□□□□□ -0.18
SPCS3-204ENST00000513139 YBEYP58557 167 aaPredicted RBP13.94□□□□□ -0.18
SPCS3-204ENST00000513139 ATP11AP98196 1134 aa13.94□□□□□ -0.18
SPCS3-204ENST00000513139 ABHD18Q0P651 414 aa13.94□□□□□ -0.18
SPCS3-204ENST00000513139 ILF3Q12906 894 aaKnown RBP eCLIP13.94□□□□□ -0.18
SPCS3-204ENST00000513139 CFAP58Q5T655 872 aa13.94□□□□□ -0.18
SPCS3-204ENST00000513139 FAM72AQ5TYM5 149 aa13.94□□□□□ -0.18
SPCS3-204ENST00000513139 FAM72DQ6L9T8 149 aa13.94□□□□□ -0.18
SPCS3-204ENST00000513139 FAM72BQ86X60 149 aa13.94□□□□□ -0.18
SPCS3-204ENST00000513139 ZNF354CQ86Y25 554 aa13.94□□□□□ -0.18
SPCS3-204ENST00000513139 NRROSQ86YC3 692 aa13.94□□□□□ -0.18
SPCS3-204ENST00000513139 TUBGCP5Q96RT8 1024 aa13.94□□□□□ -0.18
SPCS3-204ENST00000513139 ZPBPQ9BS86 351 aa13.94□□□□□ -0.18
SPCS3-204ENST00000513139 PDCL3Q9H2J4 239 aa13.94□□□□□ -0.18
SPCS3-204ENST00000513139 TRIT1Q9H3H1 467 aaKnown RBP13.94□□□□□ -0.18
SPCS3-204ENST00000513139 NOL6Q9H6R4 1146 aaKnown RBP13.94□□□□□ -0.18
SPCS3-204ENST00000513139 WDR26Q9H7D7 661 aa13.94□□□□□ -0.18
SPCS3-204ENST00000513139 FANCLQ9NW38 375 aa13.94□□□□□ -0.18
SPCS3-204ENST00000513139 TRNAU1APQ9NX07 287 aaKnown RBP13.94□□□□□ -0.18
SPCS3-204ENST00000513139 TAAR2Q9P1P5 351 aa13.94□□□□□ -0.18
SPCS3-204ENST00000513139 PDP2Q9P2J9 529 aa13.94□□□□□ -0.18
SPCS3-204ENST00000513139 SHANK1Q9Y566 2161 aa13.93□□□□□ -0.18
SPCS3-204ENST00000513139 IGHV1OR21-1A0A087WYE8 117 aa13.93□□□□□ -0.18
SPCS3-204ENST00000513139 GOLGA8SH3BPF8 625 aa13.93□□□□□ -0.18
SPCS3-204ENST00000513139 DUX1O43812 170 aa13.93□□□□□ -0.18
SPCS3-204ENST00000513139 ECEL1O95672 775 aa13.93□□□□□ -0.18
SPCS3-204ENST00000513139 NUDT7P0C024 238 aa13.93□□□□□ -0.18
SPCS3-204ENST00000513139 OAS2P29728 719 aaKnown RBP13.93□□□□□ -0.18
SPCS3-204ENST00000513139 MAN1A1P33908 653 aa13.93□□□□□ -0.18
SPCS3-204ENST00000513139 ZNF165P49910 485 aa13.93□□□□□ -0.18
SPCS3-204ENST00000513139 GPLD1P80108 840 aa13.93□□□□□ -0.18
SPCS3-204ENST00000513139 BIRC2Q13490 618 aa13.93□□□□□ -0.18
SPCS3-204ENST00000513139 RAPGEF1Q13905 1077 aa13.93□□□□□ -0.18
SPCS3-204ENST00000513139 PARP15Q460N3 678 aa13.93□□□□□ -0.18
SPCS3-204ENST00000513139 ANKS6Q68DC2 871 aa13.93□□□□□ -0.18
SPCS3-204ENST00000513139 TCTN3Q6NUS6 607 aa13.93□□□□□ -0.18
SPCS3-204ENST00000513139 TMEM71Q6P5X7 295 aa13.93□□□□□ -0.18
SPCS3-204ENST00000513139 LIPIQ6XZB0 460 aa13.93□□□□□ -0.18
SPCS3-204ENST00000513139 STRADAQ7RTN6 431 aa13.93□□□□□ -0.18
SPCS3-204ENST00000513139 AOPEPQ8N6M6 819 aa13.93□□□□□ -0.18
SPCS3-204ENST00000513139 RTL3Q8N8U3 475 aaKnown RBP13.93□□□□□ -0.18
SPCS3-204ENST00000513139 BMPERQ8N8U9 685 aa13.93□□□□□ -0.18
SPCS3-204ENST00000513139 LGR4Q9BXB1 951 aa13.93□□□□□ -0.18
SPCS3-204ENST00000513139 NAT10Q9H0A0 1025 aaKnown RBP13.93□□□□□ -0.18
SPCS3-204ENST00000513139 KLC2Q9H0B6 622 aa13.93□□□□□ -0.18
SPCS3-204ENST00000513139 OCIAD1Q9NX40 245 aa13.93□□□□□ -0.18
SPCS3-204ENST00000513139 MOSPD1Q9UJG1 213 aa13.93□□□□□ -0.18
SPCS3-204ENST00000513139 DNAJC12Q9UKB3 198 aa13.93□□□□□ -0.18
SPCS3-204ENST00000513139 KCTD3Q9Y597 815 aa13.93□□□□□ -0.18
SPCS3-204ENST00000513139 LOC101059948A0A1B0GTJ6 334 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 EFCAB7A8K855 629 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 PPM1DO15297 605 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 BUB1BO60566 1050 aaPredicted RBP13.92□□□□□ -0.18
SPCS3-204ENST00000513139 AGFG2O95081 481 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 ELFN1P0C7U0 828 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 MYCLP1P12525 358 aaPredicted RBP13.92□□□□□ -0.18
SPCS3-204ENST00000513139 CYP11B1P15538 503 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 MC2RQ01718 297 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 MYL5Q02045 173 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 RALGDSQ12967 914 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 CYTH1Q15438 398 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 DEFB109BQ30KR1 87 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 AFMIDQ63HM1 303 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 HIST2H2BCQ6DN03 193 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 PNCKQ6P2M8 343 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 CEACAM20Q6UY09 585 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 FAM129CQ86XR2 697 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 NRSN1Q8IZ57 195 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 NAGSQ8N159 534 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 TEX19Q8NA77 164 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 NETO2Q8NC67 525 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 RTP4Q96DX8 246 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 EXOC2Q96KP1 924 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 CARS2Q9HA77 564 aaKnown RBP13.92□□□□□ -0.18
SPCS3-204ENST00000513139 CBX8Q9HC52 389 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 SIX2Q9NPC8 291 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 FBXO8Q9NRD0 319 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 KCTD5Q9NXV2 234 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 AJAP1Q9UKB5 411 aaPredicted RBP13.92□□□□□ -0.18
SPCS3-204ENST00000513139 TP53TG5Q9Y2B4 290 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 TMEM184BQ9Y519 407 aaPredicted RBP13.92□□□□□ -0.18
SPCS3-204ENST00000513139 DOPEY1Q5JWR5 2465 aa13.92□□□□□ -0.18
SPCS3-204ENST00000513139 RASA4BC9J798 803 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 MKRN2OSH3BPM6 223 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 RASA4O43374 803 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 CEACAM5P06731 702 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 KRT7P08729 469 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 PNMA6AP0CW24 399 aaPredicted RBP13.91□□□□□ -0.18
SPCS3-204ENST00000513139 TCN2P20062 427 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 SERPINA4P29622 427 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 SDC4P31431 198 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 CSF2RBP32927 897 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 PTPN9P43378 593 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 CSNK1DP48730 415 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 MLLT10P55197 1068 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 POLR2LP62875 67 aaKnown RBP13.91□□□□□ -0.18
SPCS3-204ENST00000513139 IQCB1Q15051 598 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms